ZMP

lhx2b

Ensembl ID:

ENSDARG00000031222

ZFIN ID:

ZDB-GENE-051220-1

Description:

LIM/homeobox protein Lhx2 [Source:RefSeq peptide;Acc:NP_001035099]

Human Orthologue:

LHX2

Human Description:

LIM homeobox 2 [Source:HGNC Symbol;Acc:6594]

Mouse Orthologue:

Lhx2

Mouse Description:

LIM homeobox protein 2 Gene [Source:MGI Symbol;Acc:MGI:96785]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6091	Nonsense	Mutation detected in F1 DNA	Not yet available
sa21179	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa6091

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000033846	Nonsense	72	396	2	5
ENSDART00000136250	Nonsense	31	134	2	3
ENSDART00000148020	Nonsense	103	427	2	5

Genomic Location (Zv9):

Chromosome 8 (position 3254261)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	8	3028710
GRCz11	8	3087459

KASP Assay ID:

554-3748.1 (used for ordering genotyping assays)

KASP Sequence:

GCTGCGGAGGCAAGATTTCGGATCGCTACTACCTGCTCGCCGTGGACAAG[C/T]AATGGCACATGCGCTGTYTGAAGTGCTGCGAGTGTAAACTGAACCTGGAG

Long Flanking Sequence:

ACACGCAAATGGATGCATGCACAATATAATACATTCTATCTGTTGTATCCTCTTTATATGCATGATCCTCCGTTGTCACGGGAAATGTTAAAAAAAATTAAAGTAGCCTATATATCGGCTCTTATTCACTCTAAACTTGTGTATTTATCTTCTGAATTTGTTCTCACGCCCCTCCCATTCTATACACAAGTGAGCACTATTTTACTCTTAGCATGTTTTTTTATACCCAGCAAATGCGTAAAATAGTGTTTACACTCATCCCTAAAGCCATTACCATTATAATTTACAAATCTGCCTTTTAATATCATTGCTGCAACATAAGAGAGAATGGTGGAGAAAAAAAATCTGTGTTTGTGTAAGATTGGGATTTGAGTTCGTGCATTTAATGAGTCTGTGTGTTTCCGCAGAACATGCCTTCAATCAGCGGGGATCGGGTGGCTCTGTGCGCCGGCTGCGGAGGCAAGATTTCGGATCGCTACTACCTGCTCGCCGTGGACAAG[C/T]AATGGCACATGCGCTGTCTGAAGTGCTGCGAGTGTAAACTGAACCTGGAGTCTGAGCTCACCTGCTTCAGCAAAGACGGAAGCATCTACTGCAAAGAAGACTATTACAGGTGAGCCAACTCATTTGGCTACGTAAAAAGTTGATTTTAAGTTCATTTTTTCGCATTAGGAGTTTAGTTTTCGTTGTGGATAAATAATAAAAAGACAAAAGTTGTATTTTGTAAAGATATGCATTTGTTTGTAGATATATTAGATCTATTTTCTTACTTCAATTTAACGAAAAACAAAGACGCAACTAATTTCCATTGTGGGCATAACAATAATGTTGTTTTAATGTATTTTTTTTCTATTTAAAATACAAAATAATCAATGTCAATATTTCAGAAAGGATTGATTTTACTAGAATTTGTTGTTTGCTCATAATAATCTTTTATGTTTGTTTAAATTAATAAAGCATCGGGATGTTTTTTGTCTATTGCTTTTTTTTTTTTTTTTTTTTGA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa21179

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000033846	Nonsense	84	396	2	5
ENSDART00000136250	Nonsense	43	134	2	3
ENSDART00000148020	Nonsense	115	427	2	5

Genomic Location (Zv9):

Chromosome 8 (position 3254297)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	8	3028746
GRCz11	8	3087495

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCGCCGTGGACAAGCAATGGCACATGCGCTGTCTGAAGTGCTGCGAGTGT[A/T]AACTGAACCTGGAGTCTGAGCTCACCTGCTTCAGCAAAGACGGAAGCATC

Long Flanking Sequence:

TATCTGTTGTATCCTCTTTATATGCATGATCCTCCGTTGTCACGGGAAATGTTAAAAAAAATTAAAGTAGCCTATATATCGGCTCTTATTCACTCTAAACTTGTGTATTTATCTTCTGAATTTGTTCTCACGCCCCTCCCATTCTATACACAAGTGAGCACTATTTTACTCTTAGCATGTTTTTTTATACCCAGCAAATGCGTAAAATAGTGTTTACACTCATCCCTAAAGCCATTACCATTATAATTTACAAATCTGCCTTTTAATATCATTGCTGCAACATAAGAGAGAATGGTGGAGAAAAAAAATCTGTGTTTGTGTAAGATTGGGATTTGAGTTCGTGCATTTAATGAGTCTGTGTGTTTCCGCAGAACATGCCTTCAATCAGCGGGGATCGGGTGGCTCTGTGCGCCGGCTGCGGAGGCAAGATTTCGGATCGCTACTACCTGCTCGCCGTGGACAAGCAATGGCACATGCGCTGTCTGAAGTGCTGCGAGTGT[A/T]AACTGAACCTGGAGTCTGAGCTCACCTGCTTCAGCAAAGACGGAAGCATCTACTGCAAAGAAGACTATTACAGGTGAGCCAACTCATTTGGCTACGTAAAAAGTTGATTTTAAGTTCATTTTTTCGCATTAGGAGTTTAGTTTTCGTTGTGGATAAATAATAAAAAGACAAAAGTTGTATTTTGTAAAGATATGCATTTGTTTGTAGATATATTAGATCTATTTTCTTACTTCAATTTAACGAAAAACAAAGACGCAACTAATTTCCATTGTGGGCATAACAATAATGTTGTTTTAATGTATTTTTTTTCTATTTAAAATACAAAATAATCAATGTCAATATTTCAGAAAGGATTGATTTTACTAGAATTTGTTGTTTGCTCATAATAATCTTTTATGTTTGTTTAAATTAATAAAGCATCGGGATGTTTTTTGTCTATTGCTTTTTTTTTTTTTTTTTTTTGAAATATGATGACGCAATAGGCCTCAAAATTATGTTAC

Associated Phenotype:

Not determined