Busch Lab

ZMP

cadm1a

Ensembl ID:
ENSDARG00000031075
ZFIN ID:
ZDB-GENE-080505-2
Description:
cell adhesion molecule 1a [Source:RefSeq peptide;Acc:NP_001107023]
Human Orthologue:
CADM1
Human Description:
cell adhesion molecule 1 [Source:HGNC Symbol;Acc:5951]
Mouse Orthologue:
Cadm1
Mouse Description:
cell adhesion molecule 1 Gene [Source:MGI Symbol;Acc:MGI:1889272]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa23937 Nonsense Available for shipment Available now
sa37308 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa23937
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065599 Nonsense 78 408 3 10
ENSDART00000111169 Nonsense 58 427 4 13
ENSDART00000112869 Nonsense 78 436 3 11
ENSDART00000145541 Nonsense 78 447 3 12
Genomic Location (Zv9):
Chromosome 21 (position 23565244)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 24250918
GRCz11 21 24287523
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGTCAAAAACAATGACGACTCCGTCATCCAGCTCCTTAACCCCAACAGA[C/T]AGACCATCTACTTCAAAGACGTCAGACGTGAGTATACATTCTCATACAGT
Long Flanking Sequence:
ATGGACAGACATAAACAAATAGTTGGACATGTAGAGAATTTTTAGGTAGATGGATGGGCGGAAAGATAAATGGATGGATGGATGGATAAATGGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAAAGATAGAAACACAAATCATTTTGATGGATGGATGGGTGGAAGGATGAAAGGACAGATAACATTTCTGTATTATCAGTCTGGTTTGAATATTACCAGCCATAAGCTCATATATTCCTATCTTTTAATCTCCACCTTCATGTCTCTCTCTTTGTCTCTCTGCAGTCCAAAGTCAGAATCTCATATCGGACAACGTCTCAGTAGTGGAAGGAGAGACAGCCACCATAAGCTGTCGAGTCAAAAACAATGACGACTCCGTCATCCAGCTCCTTAACCCCAACAGA[C/T]AGACCATCTACTTCAAAGACGTCAGACGTGAGTATACATTCTCATACAGTCCACACTCAAACAGTTCACCCGCCCCCAGTGAAGCGGAAGTGTTAATGCATCAGAGTAATCCGCTGTGCTTTTGAGGGCAGTCGATACAGAGACCCAGCTGGCTAGTGAGGGCATTTATTTTATTTTTTCTTCCTCAGTGATTTGCCTTGCTCTCGTGTGATCCGTTTTACCCAAGACCGCTCTGATATTTTCCTACAGCTGCACTGTGTAATTATAGCAGAGTCTTTCTAAAGGGTTTCATCTCTCCCACCCTTCGATAAAATATTGCACCCGCCGGTCCCATGTCATATGCAGAAAAGCACTTTGATGGTGGCATTTTCCTTGCACAAAAGTTGCAGTGGGAAACATTTTTAGGTAGCTCAAGCCAAGTGCTTTGGAGTTCAGTCCGAGTTCAATTCGGCACGTATCAGCTGGTGTCAATGGACATGACGCCTGTCTCTGCAATACTG
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa29592
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065599 Nonsense 175 408 5 10
ENSDART00000111169 Nonsense 155 427 6 13
ENSDART00000112869 Nonsense 175 436 5 11
ENSDART00000145541 Nonsense 175 447 5 12
Genomic Location (Zv9):
Chromosome 21 (position 23583885)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 24269559
GRCz11 21 24306164
KASP Assay ID:
2261-5629.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGATAACCTGCACCTCCATGGGCAGCAAACCCGCCGCAACCATCAGATG[G/A]ATGAAAGGAGACAAAGAGCTACAGGGTGGGTCAAGTCACATTGTGTACTC
Long Flanking Sequence:
ATTCTGATAAATGAAATGCATTTTTAGTACACAAAAAGCACTTATTTCCTATTTGTTCCAATTATCTTAATTATTCCAATCTTTTCACCGATAATGTTTCCTTGTTAAGATATGCCTGTGAACATTTCCAATTATCCAAGTCAGGGCTGAATGTTTCAACAGATTTGTTCTAGTCAACTGGATGTATTGCTTTCTGTTGCATAAGATGTTTCACCAGCGATCGTCTACTCATCAGAGTACATACTTCATCGCGGTTCACTCTTTTACTTTATTTTCTCTGATGTGTTCATCCTTCTGTGTTAGTCCATCACTGCACCCTGGGCTGAATGAGACTGTAGTGGTGCTTGATTTACAGAGCGCCTTGTAAAATCTGTCTGTCTTTTCTCAGTCCCACCAGGAAACCCAATCATAGAGTCCCGCGAGGACATCGTCAGCGAGGGCAACGAGACAGAGATAACCTGCACCTCCATGGGCAGCAAACCCGCCGCAACCATCAGATG[G/A]ATGAAAGGAGACAAAGAGCTACAGGGTGGGTCAAGTCACATTGTGTACTCACAAACAAACCCGCCGTTTACCAGGTTGTTTTTCTGCCGCAAACTTTCCTTTGATGCTTAATGTATTAAAAAACAATATGGTTTAAAACATCTTACAATTACTTTGATTAGTACTAGCAATAAGCAATATTGCATGTACATAATGCTTAGTTATACCACTGTTTTAGGTCACACTTTATTTTAATGTACAATAAAGACTATTAACAAACCATTAACATTTAGCTCTAGTAAACTACTAAATAGCTGCTTTTTAATAATTTGTAAGTTATTTGTTGGGTTTAGGTATTGGGTAGGATTAGGGATTTAAAATATAATTATATTTTAAGTACTAATAATCAGTTAATATATTAATAATATGCAGATAATAAGAAGTAATAATATAAATAATATTTAGTAGTAATAATATAAGTAGTAAATAATATAAATTGTTACTTAAACTTAAGTGATACC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37308
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065599 Nonsense 231 408 6 10
ENSDART00000111169 Nonsense 211 427 7 13
ENSDART00000112869 Nonsense 231 436 6 11
ENSDART00000145541 Nonsense 231 447 6 12
Genomic Location (Zv9):
Chromosome 21 (position 23602635)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 24288309
GRCz11 21 24324914
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGTGGTCTGCATTGTTGACCATCCAGCAGTCAAGGACTTTCAGGCACAG[A/T]AGTACCTCGAAGTGCAATGTGAGTGAGATTTTAGTGTTTTAGTCATTCTT
Long Flanking Sequence:
TTTGTATCAAATGTACATTCACTGAATGAGCTTATTTATAGAAAATCTGATCAAATGTGGACTCCTAAATCAATACACAGCTCTGTATTTGAGGGGTGTTTTTGAGTCGCACAGCCCCTCCCAGATGGTTACATTTCAGGTGTCGCAGCGGGGGGCCGTTTACTGCACACATGTCAATGATAAACGCCAGCGAGCTGCCATATGTCACACATGCGGTAGACATTGGGGAGTATGCTCACAGGACGGAACATATACCATGGCCTTCGATACATTTAGCCACCCGTTGTTTCTTGACAGGGATGATAATGAAAACGAATTCATTTTAATTTGCAATTCTGTGTTGGTTTCTGTCCCTCACAGGCAAGTCTAAGGTGGAGCTCACATATGACAAGATGTTCACTGTGACGAGCTGGCTGAGGTTAACAGTCACGAGAGAAGACGACGGTGTTCCAGTGGTCTGCATTGTTGACCATCCAGCAGTCAAGGACTTTCAGGCACAG[A/T]AGTACCTCGAAGTGCAATGTGAGTGAGATTTTAGTGTTTTAGTCATTCTTGTTAGATTAAAATGTTAGCATTGTAATTTGTTTGTAAGTGGTATGATATTTTATATTAGATTTTATCATGATAGGATATGATACAATACAATACGATACGGTACGATAAGGTATGGCATGTTTTATAGGACCTTGTGCCAATGTTTTAAATGAGCAATATCACATGACGAGCAGTGCTATATGGCTGAATATAGGCGTTTGTGGGACAAGTGCATTGGCTCGAGGCCACAGATACAGCCTTATCACAATGCTTCGAGTGTAATATTGCGTTTATACAACAGTTTGACGGCATAATCGTGTGTGTAAAAAAATCAAACACTGAGATTCTCAAACCGTTTTGTATGAGGAACTACTTTTTTTCCACTATACAAGTTTACAATTGCAGCTGACATCAGAACAGCAGAAACTATTGTTATTAATTCACCAATGTCACTTAGAGCTGATATTTGA
Associated Phenotype:
Not determined