ZMP
otx1a
Ensembl ID:
ZFIN ID:
Description:
Homeobox protein OTX1 A [Source:UniProtKB/Swiss-Prot;Acc:Q90267]
Human Orthologues:
OTX1, OTX2
Human Descriptions:
orthodenticle homeobox 1 [Source:HGNC Symbol;Acc:8521]
orthodenticle homeobox 2 [Source:HGNC Symbol;Acc:8522]
orthodenticle homeobox 2 [Source:HGNC Symbol;Acc:8522]
Mouse Orthologues:
Otx1, Otx2
Mouse Descriptions:
orthodenticle homolog 1 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:97450]
orthodenticle homolog 2 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:97451]
orthodenticle homolog 2 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:97451]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa19590 | Nonsense | Available for shipment | Available now |
sa12472 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa19590
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000006538 | Nonsense | 31 | 338 | 2 | 4 |
Genomic Location (Zv9):
Chromosome 1 (position 51433527)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 1 | 50280406 |
GRCz11 | 1 | 50924205 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGGGGCTCGGCGGGGCAACCATGGACCTCCTGCATCCCTCTGTGGGATA[T/A]CCCAGTAAGAGCATCACATTTCTTTATGCAAAAGAGCAAGTAAATATCTA
Long Flanking Sequence:
TAATTCTGCCGCCAACTTTAAACAAAAGAAAAGATCAAACAGTCCGCGGCGTTTAGTCCGTCAGGAGCGCTTAACAGGGCATGACATGTAAATGGCCAATTAGTGTGTGAAGCCCTTGATTAGTCGAGTGTGAAAAAAGAGATCATCAATGGAAAGACATTAGTCATATTCGGACTGATCACTCTTGCGACATGCGTTTGATGTGTCTGTAGACCAATTAAATATGATGCTGCGTGCATTCGTTTATTATGATATTCGTTTATTTTATTTTCTGCTTAGTCCCTTTGGACCGCCAACGTTTTCAGCATATGTTTATCATTTTATAACTGTTTATTGCCCCGTTTATTATTATATATATTTTTAAATAATAATTTATATTTGTTGCAGGTGTCTCCCTGGAGCTCAACAATGATGTCATACCTCAAGCAGGCCCCGTATGCCATGAACGGGCTGGGGCTCGGCGGGGCAACCATGGACCTCCTGCATCCCTCTGTGGGATA[T/A]CCCAGTAAGAGCATCACATTTCTTTATGCAAAAGAGCAAGTAAATATCTACTTCTTTTTCTTTTCTTGTTTGCAATAGCATAGGACGACTTTAAAATTATTTTAAAGCATTTTGAGCGAAGAGTTTGCATGTTCGTGTGGGTTTCCTTCGAGTGCTCCGGTTTCCCCCACAGTCCAAAGACATGCGCTGACCTATGGTTGAATTGAATGAGCTAAATTGGCCGTAGAGTATGTGTGAGTGATTGCAAGGGTGCGTGAGTGTTTCTTAGTGCTGGGTTGCGGCTAGAAGGACATCCACTGAGTGAAACATATGCTGGATAAGTTGGCAGTTCATTCCGCTGTGGCGACCCCTGATTAATAAAAGGACTTAGCCGAAAAGAAAAGAAATGAATGAATATTTGAGAGAAAACGCAAGATGGTGAAAATCTTTAGACCTCATTTGGTTGTCTTTGTTTTTGTAGCGAATCCTCGTAAACAAAGAAGAGAGAGGACGACATTTAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12472
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000006538 | Nonsense | 85 | 338 | 4 | 4 |
Genomic Location (Zv9):
Chromosome 1 (position 51438171)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 1 | 50285050 |
GRCz11 | 1 | 50928849 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTGCAGACACCCTGAATAACCCATGTTGTATTTTWTAATGAACAGGTTTG[G/A]TTYAAAAACAGAAGAGCWAAGTGTCGCCAGCAGCAGCAGCAGAGCAGCAC
Long Flanking Sequence:
CAGCATTTACTTGTTTCAAACCGGTAAATGCCGGTATTACTTTCATTCTTTAGTTGAACACAAAGCAAGGTATTCTGAAGAAAGCTATAAACGTTGAATTGCATTGTTTTTTTGGGTTTTTTTTTTTTGGTTCATATGAACGTCAATGGTTACAGGTTTTCAGCTTTCTTCAAAAAAATAATAAATTCATAAAAGTTTAGAACCACTTGAGTGAATTAAAGCTGAGGAAATCATCGTTTTTATGTGAACTATTCCTTTAAGCTCATTTAACTCAATTCAGTTAAGTGTTTCAGTGTTAATCAGCCCTAAAGTATATTAAAGGTGTACATTTAATCAACTAATTTATACATTAATCAATTTAAGCCAACCCCAGAAGACAATACTTAATACTTTTTAAGGGCCTTAAATATCTCTGCATTGATTTATCAACTTTTAATACTTTTTAAGACCCTGCAGACACCCTGAATAACCCATGTTGTATTTTATAATGAACAGGTTTG[G/A]TTTAAAAACAGAAGAGCAAAGTGTCGCCAGCAGCAGCAGCAGAGCAGCACCAACTCAAAGATCCGTCCAGCAAAGAAGAAACCGTCTCCGTCCCGCGAGAGCCCGGGGTCTGAGAGCAGCGGCCACTTCACTCCCCCTGCCGTCTCTTCATCATCCTCATCCTCGTCTTCATCCTCGGGCTCCAACCCGTCTGCTCTTAGCGGAGTTGGTCTGATCAGCAGCTCGTCCTCAGGAACACCTGTCCCGTCCATCTGGAGTCCCGCACCAGTCTCTCCAGTCCCCGCACCCCCCTCCCTCCCTGATATCTCGCCTCCAGCCAGCGCATCCTGCATGCAGAGGGCTATGTCTAGTGGAGGGGGGACCACTGGCGTCCCGTCGTACCCCATGCCCTACAATCAGGCTCCCAGCTACGCCCAGGGCTACCCGACCTCAAACGCTGCTTCTTATTTCGGAGGCATGGACTGCGGATCCTACTTGGCACCCATGACCGGCCACGCCCA
Associated Phenotype:
Not determined