Busch Lab

ZMP

lrrc42

Ensembl ID:
ENSDARG00000030591
ZFIN ID:
ZDB-GENE-030131-4992
Description:
Leucine-rich repeat-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:Q6P5J6]
Human Orthologue:
LRRC42
Human Description:
leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:28792]
Mouse Orthologue:
Lrrc42
Mouse Description:
leucine rich repeat containing 42 Gene [Source:MGI Symbol;Acc:MGI:1925059]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa18299 Essential Splice Site Available for shipment Available now
sa15849 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa18299
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000045056 Essential Splice Site 323 407 6 7
Genomic Location (Zv9):
Chromosome 2 (position 26758067)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 26954263
GRCz11 2 26609897
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAAGTGCCAAAGAAWGACCCCAAAYCAAGAACAAATGCCCTTCGTTTCTG[T/C]AAGTTTATTCATATTATTTATTATATTTGACTTTATATATTTAATATTAT
Long Flanking Sequence:
ATTTGGTTTTTATGCAATTGTATTCTAATTTACACACTTGTGTTTCTGTTGATTAGAGAATCACATCACTGAGAAAGGGCTCAGATATCTAACATGCTTTAAAACACTACAGAAACTAGACCTATCTGGAACAAAAGTGATGGTAAGACATTGAAAAAGAGAACCTCATTGACACTGAATGGGCTGTTGACGTTTTCCTAAAGGTCTTCTATGATCATGTCTTGCAGATGGACGTGTCCTTGAAAGGTTTCTTCCGGATGATGGGAATGGCCCTCTCTGAGACTCCTCTGATGGACTTCACACACACTGCCTGCAAAACAGAAGGCTGGGCTGAACAGGTAACAAATGCATCGTTTTATAGTGTTGCTGTTGTAGAGGTTTACACTGGGCTCTTGTGTCACTGTTTACATCTTTAACCAGGTAATAAACCAATGGGAAATCACAGCAGCAGAAGTGCCAAAGAAAGACCCCAAACCAAGAACAAATGCCCTTCGTTTCTG[T/C]AAGTTTATTCATATTATTTATTATATTTGACTTTATATATTTAATATTATATTTATTTCATTTACCCATCCATCCATCTGTCTATTTATCTATCTGTCTGTCTGTCTGTCCGTCCATCTGTCTATCTATCTATCATCTATGCATCCATCTGATTGTCTGTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCCGTCCGTCCGTTCATCTATCCATCCATCCATCTGATAGTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCGTCCGTCCTTCCGTCCATCTATCTGTCTGTCTGTCCAAAATACCATAGCAACACTAGCAATCACCCATAATCTCATAACTGGTTAGCGGTCACATAGAATAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15849
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000045056 Nonsense 336 407 7 7
Genomic Location (Zv9):
Chromosome 2 (position 26758871)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 26955067
GRCz11 2 26610701
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTTTTTTAGATGGAAGAGAAAAGTTYGTCAGAGARATGTTAAACTCCTG[G/A]TCTGAAACAAGTGACGCCACAAACAAAGATAAAGCTGTGCCCATTCACTT
Long Flanking Sequence:
TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCGTCCGTCCTTCCGTCCATCTATCTGTCTGTCTGTCCAAAATACCATAGCAACACTAGCAATCACCCATAATCTCATAACTGGTTAGCGGTCACATAGAATATCCTAACAACCACATGGCAGTCAGTTTGAACTCATTTAGTCATTTAGCAGACGCTTTTATCTAAAGCAACTTACAAATGAGGACAAGGAAGCAATTTACACAACTATAAGAGCAACAATGAATAAGTGCTGTAGGCAAGTTTCAGGTGTGTAAAGTGTAAGAGGCAAAGCATTAGTAATATAATTTTTTTCCCAATGTTCAGGCTAGGCAACATTAAAGTTTGCCCTTCATATGGTTTTTTCCTTTTTTTTTCTTGTTTTTTAGATGGAAGAGAAAAGTTTGTCAGAGAGATGTTAAACTCCTG[G/A]TCTGAAACAAGTGACGCCACAAACAAAGATAAAGCTGTGCCCATTCACTTTTGTAAGGTTGATGATTGTGTGCAGAGTTCACCTTCAGGGGAGACACATTCAACACACAAGAGCAGGAAGAGGAGACTGTCAACAGAGGAAGAGCAAAGTGCAGCTCCAGTGGCAAAGCGTCTGCCTCTGTCTGTGGAAGATTTACATCTGCTGAATAGTTACTGAGTGGAAACACACAGTCATGGGATGTTTCTGCAGCGCTGTCCTCTGTGAGGAAGGTGACACTGATGTGCTTTTAGATTAGATCATTTACTATTAAAAACGGCTGCTTTATTTTTGTACATAAGTCTGCATTTCTTCAAGCATGTTCAGTTGATGCCAAATATGGATTTATGGGAAATAGTTTTGGCTTATAGCCATGGGTGTAAAAATGTACATGGTTTAATTCATTAAATGGTGCTTCCATGATACTTAAAACTAATTAAGAGTTGAAATTTTAAAGCTATATG
Associated Phenotype:
Not determined