ZMP
TRAF2 (2 of 2)
Ensembl ID:
Description:
TNF receptor-associated factor 2 [Source:HGNC Symbol;Acc:12032]
Human Orthologue:
TRAF2
Human Description:
TNF receptor-associated factor 2 [Source:HGNC Symbol;Acc:12032]
Mouse Orthologue:
Traf2
Mouse Description:
TNF receptor-associated factor 2 Gene [Source:MGI Symbol;Acc:MGI:101835]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa40445 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa40444 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa40445
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000043466 | Essential Splice Site | 201 | 502 | 5 | 11 |
Genomic Location (Zv9):
Chromosome 5 (position 30400095)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 28161884 |
| GRCz11 | 5 | 28762037 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCAATGATTTGTGAAGGCTGTGCCAAGAAAAAAATTCCCAGAGAGAAAG[T/A]AAGTAAATGCTATTTAGGCCATTTACATGTATCAATGTTATGTCACAAAG
Long Flanking Sequence:
CCGAAACTTGTATTATTGTTGGCGAGTGAAAGAGTCGTTCATAACGGAGATTCATTCACAAACAAATCGCTCCCTCTGTCATTATGAGAAGTGAAAGCAGGAGAGGTGTGTGCACGTATTAGATCAAGTTTAACAGGGAGGGTGAATAGTACATTTCTGTACACACAAACACAAGCTTTTTGTCAGGAATGCCCATGTGGTCACTGATCCATCAATGTAGAAAAGTGATGTAAAACTAAAATTTTCATAATTAAAAAAAAAATTACTTATTAACATCCAGGATAACTCTCGTTCATAGTTATATGTGTATATCTCTGGCTCTCTCAACCACAACCCCCCCTAGTTTTCATGTAGTTGAAGCTTTACTTATTGTCAACAGAATGTCTAAAGGGAAACATCAGAATAAACTGCCACTGTTTTTTAGGCCCATGATGAGATCTGCCCTAAATACCCAATGATTTGTGAAGGCTGTGCCAAGAAAAAAATTCCCAGAGAGAAAG[T/A]AAGTAAATGCTATTTAGGCCATTTACATGTATCAATGTTATGTCACAAAGTCAACTTAAACAAATGTTTTTCAGTCATTTTCATAAATATTTCTTTCTACAGTATGTGGACCACATTAAACTGTGCACCAAATTCAGAACACCCTGCAGATTTCATGTTGTCGGCTGTGATATGACGGTAGGCAAACTCTTTCAATATATAGTTCACATTCAGTTTATTCAACAGCTGCTTTCAGCATCAAGCTTTCCAAGTTCTTGTAAATGGAATGTGATAAGTGATATGTTAATTGAAACAAATCAGCAATGGAGACTTACCCACAATCATACTGAACAAGCAGACGTGTCTGCAAAAGGAGTTCTAACAGAATGAATCTGTGAATGCCAAAGCCCACGTTTAAACATAAGTCCCATTATCATCCAGTATATTAAAGAAATTGGAATCAGAATTGGTGAAATGTCAAGTTACCTGATATGTTGACATATTATTTGATAAGTTGTATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40444
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000043466 | Nonsense | 357 | 502 | 9 | 11 |
Genomic Location (Zv9):
Chromosome 5 (position 30396607)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 28158396 |
| GRCz11 | 5 | 28758549 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTAAGATGAGGGAGATGTCTGCTGCCACCTATGATGGTGTGTTTGTATG[G/A]AAGATCTCAGACTTCTCGAAGAAGAGACAGGATGCTGTAGCTGGACGAGC
Long Flanking Sequence:
ATGTCCTTGGGGTCTTAAACTCTTAAAATGTCCTAAATTTAAAAAACAAAATTGTAGGCCTTAAAAAGCTTGTAAATTTTAATAATAAAAAAAAAAAAGACATTATGTTGAAAAAAGTACATGTATGTAACTAGACTTTAATTGTTTTGGCGCATTATTTAACATATGGGACTATGATAAAATTATTTTTATATATAGAAAGTAACCAGGGCATTAAAACGTCTGAAATTTTATCCATAATGGTCTTTAAAAGATCTTCAAAAGTTTTAAATTTAACTTGATGAATCTCAAGCAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGTGAAGCAGATAATTCTTGTTTTTCCCCCAGAAATGTTTGATTCAGTACTGGATGTTTGTACAGGTACGGCAGTTGGAGAGGACGGTAGGCCTTAGGGATCTCTCCATCGTGGAGATGGAGGCTAAGATGAGGGAGATGTCTGCTGCCACCTATGATGGTGTGTTTGTATG[G/A]AAGATCTCAGACTTCTCGAAGAAGAGACAGGATGCTGTAGCTGGACGAGCACCTGCTATGTTCTCACCTGGTACTTTTACTTGTTATTCTTCTATATGTTTTTGTAATATTTAGGAATATTGTGAGTAAAGCCCTCTAAAATCCAATTTATTTTTGACCAAATTCCATTTTATTTAATTTTAAATTTTAGTAATCAAAAAGCTTGTCTGATTAATTGAAATAAAAAAAAAATTACAGTTCACAATTTACAATTGCAAATATAGAATTTTTAAACTCTATGGCAGGCATTTTTTTCCTCAAAGTACATTTTACATTCTGATTAATGATTGCATTACACTAATACTAATGTGAGTGTGTAAAAAAAACTAAAAAAATTATATATATATATATATGTGTGTGTGTGTGTAAGTTAATGTATTGTTACTACTGCTTTAAGTACAGTTGTATTAGGTCATTTTTCCTGTATTTTCCATTAAGCTCAATTAACTTGGCCTGTTGTC
Associated Phenotype:
Not determined