Busch Lab

ZMP

si:dkey-22i16.2

Ensembl ID:
ENSDARG00000029898
ZFIN ID:
ZDB-GENE-090312-66
Description:
hypothetical protein LOC100001558 [Source:RefSeq peptide;Acc:NP_001139095]
Human Orthologue:
CNGA1
Human Description:
cyclic nucleotide gated channel alpha 1 [Source:HGNC Symbol;Acc:2148]
Mouse Orthologue:
Cnga1
Mouse Description:
cyclic nucleotide gated channel alpha 1 Gene [Source:MGI Symbol;Acc:MGI:88436]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa14137 Essential Splice Site Available for shipment Available now
sa18298 Nonsense Available for shipment Available now
sa4861 Nonsense F2 line generated Not yet available
sa6600 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa14137
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048225 Essential Splice Site 10 547 None 3
ENSDART00000134649 Essential Splice Site 160 697 None 7
Genomic Location (Zv9):
Chromosome 1 (position 44279224)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 43195540
GRCz11 1 43896704
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCATAATCACATTCCCTGTCATGTACAATTGGACAGTTATAATTGCACGG[T/C]AATAATCTGATGTTCATAAGATGAAGAACAYAAATAGAATACAWAAAAGA
Long Flanking Sequence:
GAAAAAAGAGAAAAAAGAAAAGAAGGAGTACGTAGAATACCTGAACAAATCAGTCTATAAACAATGTCCAAATGTTTTATGGTATTAACCTGTGTGTCATCCTGAAGGAAAAAGGAAAAGAAAGAGAAGAAAGAAAAGAAGGAGAAGAATCAAAAGAACGAGAAGCAAAAAGATAATGAGAAAGAAAAGGAAAAAGAAAAAGAGAAGGAGAAGGAAAAAGAAAAGGAGAAGGAAAAAGAAAAGGAGAAAGAAAAGGAAAAGGAGAAAGAAAAGGAAAAGGAGAAAAAGGAAGGGTTGGTCTCATGCTTTTTATTAGCCGTTTCTAATCTGTGATCATCAAAAGTTCAAAGCAATCACCGTTGATTATTTCTCATGTCAACTTCATTTTCTCCAGGCCCAAGGAGGTGTTTGTGATTAACCCCGCGGGACTTCTGTACTATCAGTGGCTGCTCATAATCACATTCCCTGTCATGTACAATTGGACAGTTATAATTGCACGG[T/C]AATAATCTGATGTTCATAAGATGAAGAACACAAATAGAATACATAAAAGAATCTCCTTTACTCCCTTCAACCCATAAGCTAATAAATGCATCCATACCAGACAGAGCAGATGCATTTTAAATACTCTGGAGTGTATTCATATGATGTCTGTTCACACAGAGCTTGTTTTGAGGAGCTTCAGCATGAATATCTACTGACGTGGTTCCTCCTGGACTACACCTCTGACCTGCTTTACTTGGCTGATATGGCATTCAGAGCACGAACAGGTACTGTACATCACTTGTTATTTCAGATGTTTCAATGAAGGCATAAACCTGTGATACGACTTGTTCCAAACCTGTTTGAGTTTATTTTGTTTGAGATAATTTGAAAAATGCTGGCTGCTAGCACCCATTGACTTCCATAGTATTTTTTCCTACAATGAAAGTCAATGGGTCCCGGCAATCAGCATTTTTCAAAGAGAGAGTAAACAATGAAAGAGGGGAACTACCACTTTAATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18298
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048225 Nonsense 35 547 2 3
ENSDART00000134649 Nonsense 185 697 6 7
Genomic Location (Zv9):
Chromosome 1 (position 44278989)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 43195305
GRCz11 1 43896469
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAATATCTACTGACGTGGTTCCTCCTGGACTACACCTCTGACCTGCTTTA[C/A]TTGGCTGAYATGGCATTCRGAGCACGAACAGRTACTRTACRTCACTTGTT
Long Flanking Sequence:
AAGAAAAGGAGAAAGAAAAGGAAAAGGAGAAAGAAAAGGAAAAGGAGAAAAAGGAAGGGTTGGTCTCATGCTTTTTATTAGCCGTTTCTAATCTGTGATCATCAAAAGTTCAAAGCAATCACCGTTGATTATTTCTCATGTCAACTTCATTTTCTCCAGGCCCAAGGAGGTGTTTGTGATTAACCCCGCGGGACTTCTGTACTATCAGTGGCTGCTCATAATCACATTCCCTGTCATGTACAATTGGACAGTTATAATTGCACGGTAATAATCTGATGTTCATAAGATGAAGAACACAAATAGAATACATAAAAGAATCTCCTTTACTCCCTTCAACCCATAAGCTAATAAATGCATCCATACCAGACAGAGCAGATGCATTTTAAATACTCTGGAGTGTATTCATATGATGTCTGTTCACACAGAGCTTGTTTTGAGGAGCTTCAGCATGAATATCTACTGACGTGGTTCCTCCTGGACTACACCTCTGACCTGCTTTA[C/A]TTGGCTGATATGGCATTCAGAGCACGAACAGGTACTGTACATCACTTGTTATTTCAGATGTTTCAATGAAGGCATAAACCTGTGATACGACTTGTTCCAAACCTGTTTGAGTTTATTTTGTTTGAGATAATTTGAAAAATGCTGGCTGCTAGCACCCATTGACTTCCATAGTATTTTTTCCTACAATGAAAGTCAATGGGTCCCGGCAATCAGCATTTTTCAAAGAGAGAGTAAACAATGAAAGAGGGGAACTACCACTTTAATTATTTAATTTTAAGACTTTTAAGACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAACTTGCTGGAATTCCTTATCATGATATAATAAATTTTATTCCAATCATTTATCCCTATCTTGTATGTTTTTTTCTTTTAACCAGGTTACCTGGAACAGGGCCTGCTTGTCAAAGACGAGAAGCTCCTCCTCAAGCGCTACACCGACAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa4861
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048225 Nonsense 87 547 3 3
ENSDART00000134649 Nonsense 237 697 7 7
Genomic Location (Zv9):
Chromosome 1 (position 44278429)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 43194745
GRCz11 1 43895909
KASP Assay ID:
554-3541.1 (used for ordering genotyping assays)
KASP Sequence:
CCGCCTCGATGTCATCTCTATGCTACCCACAGACATCTTTTACTTTATTT[T/A]GGGGTTGGACTACCCAGAAATCCGCATAAACAAGTTGCTCCGGCTGAACC
Long Flanking Sequence:
GTTTCAATGAAGGCATAAACCTGTGATACGACTTGTTCCAAACCTGTTTGAGTTTATTTTGTTTGAGATAATTTGAAAAATGCTGGCTGCTAGCACCCATTGACTTCCATAGTATTTTTTCCTACAATGAAAGTCAATGGGTCCCGGCAATCAGCATTTTTCAAAGAGAGAGTAAACAATGAAAGAGGGGAACTACCACTTTAATTATTTAATTTTAAGACTTTTAAGACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAACTTGCTGGAATTCCTTATCATGATATAATAAATTTTATTCCAATCATTTATCCCTATCTTGTATGTTTTTTTCTTTTAACCAGGTTACCTGGAACAGGGCCTGCTTGTCAAAGACGAGAAGCTCCTCCTCAAGCGCTACACCGACAGTCTCCAGTTCCGCCTCGATGTCATCTCTATGCTACCCACAGACATCTTTTACTTTATTT[T/A]GGGGTTGGACTACCCAGAAATCCGCATAAACAAGTTGCTCCGGCTGAACCGCATGTTTGAGTTCTTCAAAATCTCTGAAACCATGACCAACTACCCCAACATCTTCCGCATCTGCACTCTGGTCATGTACATCATCATCATCATCCACTGGAACGCCTGCCTCTACTTCTCCTTCTCCAAGTCTATTGGGTTCGGCTCGGATGCATGGGTGTATCCTGCTCTCACCGAGCCTGAGTTTGGAGAGCTCATGCGGAAATATTCCTTCAGCCTCTACTGGTCCACACTTACTCTCACCACCATTGGAGAAACGCCATCTCCAGAGCTCGACTCTGAGTTCTTCTTCCATGTAGTTGACTTCCTGGTTGGCGTCTTGATCTTTGCCACCATTGTAGGTAACATTGCAACAATGATCTCAAATATGAACGCAGCCCAGGCTCAGTTCCAGGCTAGGATTGATAATATTAAGCAGTACATGCATGCACGGCATGTCAGCAAGGAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6600
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048225 Nonsense 179 547 3 3
ENSDART00000134649 Nonsense 329 697 7 7
Genomic Location (Zv9):
Chromosome 1 (position 44278152)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 43194468
GRCz11 1 43895632
KASP Assay ID:
554-5153.1 (used for ordering genotyping assays)
KASP Sequence:
GAGCCTGAGTTTGGAGAGCTCATGCGGAAATATTCCTTCAGCCTCTACTG[G/A]TCCACACTTACTCTCACCACCATTGGAGAAACGCCATCYCCAGAGCTCGA
Long Flanking Sequence:
CACACACACACACACAACTTGCTGGAATTCCTTATCATGATATAATAAATTTTATTCCAATCATTTATCCCTATCTTGTATGTTTTTTTCTTTTAACCAGGTTACCTGGAACAGGGCCTGCTTGTCAAAGACGAGAAGCTCCTCCTCAAGCGCTACACCGACAGTCTCCAGTTCCGCCTCGATGTCATCTCTATGCTACCCACAGACATCTTTTACTTTATTTTGGGGTTGGACTACCCAGAAATCCGCATAAACAAGTTGCTCCGGCTGAACCGCATGTTTGAGTTCTTCAAAATCTCTGAAACCATGACCAACTACCCCAACATCTTCCGCATCTGCACTCTGGTCATGTACATCATCATCATCATCCACTGGAACGCCTGCCTCTACTTCTCCTTCTCCAAGTCTATTGGGTTCGGCTCGGATGCATGGGTGTATCCTGCTCTCACCGAGCCTGAGTTTGGAGAGCTCATGCGGAAATATTCCTTCAGCCTCTACTG[G/A]TCCACACTTACTCTCACCACCATTGGAGAAACGCCATCTCCAGAGCTCGACTCTGAGTTCTTCTTCCATGTAGTTGACTTCCTGGTTGGCGTCTTGATCTTTGCCACCATTGTAGGTAACATTGCAACAATGATCTCAAATATGAACGCAGCCCAGGCTCAGTTCCAGGCTAGGATTGATAATATTAAGCAGTACATGCATGCACGGCATGTCAGCAAGGAGCTTGAGGACCGGGTTATCAAGTGGTTTGACTACCTGTGGACAAACAAGAAAGCACAAGATGAGCGAGAAGTACTGAGGTACTTGCCAGACAAGCTAAGAGCGGAGATTGGCATGAACGTACACTTGGATACACTCAAGAAAGTGCGTATTTTTGCAGACTGTGAGGCCGGGTTGCTGATTGAGTTGGTGTTGAAACTTCGCCCTCAAGTTTTCAGCCCCGGGGACTACATCTGTCGAAAAGGTGACATCGGTCGTGAGATGTACATCATAAAGGATGG
Associated Phenotype:
Not determined