Busch Lab

ZMP

si:dkey-60b12.7

Ensembl ID:
ENSDARG00000029671
ZFIN ID:
ZDB-GENE-060503-266
Description:
Xenotropic and polytropic retrovirus receptor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:A8DZH4]
Human Orthologue:
XPR1
Human Description:
xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:12827]
Mouse Orthologue:
Xpr1
Mouse Description:
xenotropic and polytropic retrovirus receptor 1 Gene [Source:MGI Symbol;Acc:MGI:97932]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa39767 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa31254 Nonsense Available for shipment Available now
sa6825 Nonsense Mutation detected in F1 DNA Not yet available
sa17172 Nonsense Available for shipment Available now
sa19670 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa39767
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050597 Essential Splice Site 75 693 3 15

The following transcripts of ENSDARG00000029671 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 6738085)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 7161655
GRCz11 2 7033261
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCCAAACGTGTGAGAAGGAGCTGGCCAAAATCAACACGTTTTATTCTGG[T/A]AAGAAAGTGTAATCATGAGACGTGTTTGAAGCAAAGCTGACGGTTTGTCT
Long Flanking Sequence:
GATCACGGATCGCAAAAAAAAAAAAAGGATTACTTAATCTGCATCAATTTTATCCAGATTAAACCTTTTGAAAAACCGGGTGACCAATTTCCTTTCAGCTGTCAAATGGTACACGTATATTATAATATTATCCTGCAATAAAATCCCTATGATGTTCATCATAAGCATAAGATGTAATTGCCACCTGGTTAGTTGAATCTGCTTAACTGCTACAGTACCACATAACAAACCACATAACATTATACATTATAGCCTTTCGCTACGTCAATATTTGGATTTACTCATCTCTGGCTGCTAACAGAATACTTCCTAAATAATAACCTTGAAATTTCTAGCATTGCTGCTTTTGTTTTCATTAAATCAGGATTACTTTCTCACACTTGTTTCTTGCTTTCAGTCACCGATGAAGACACCGTCAAGAGATACTATGCCAAGTTTGAGGAGAAGTTCTTCCAAACGTGTGAGAAGGAGCTGGCCAAAATCAACACGTTTTATTCTGG[T/A]AAGAAAGTGTAATCATGAGACGTGTTTGAAGCAAAGCTGACGGTTTGTCTCTGATGCCTGCTGTTTTCATTTCTTGTCATTATTAGTATTTACACTGACGGATTACCCATCACACAGAGATTTGACTTGAATGAAAACAGACATTAAAGCTTCAGAGTCCAAGCCGGGACTGGCATTAAACCAGGTGGTTTTATTAAAGAGTGTTATTTCATTGTACCCCTGCAATTAACCACCTGTCTTCTCTTTCAGTCAATCCCGCTGTTCACATTGGTGCTTTTTAGACCTGCAAATCAATTATTTTGCTCTCAGAAGTTTCATTCATTATCTTGCTTTGCTTTCACAAGGCATGGCTTGAGATTGCCATCATTTTGTTTGCATATGCTGCCTGAAACGTAATATTTTGCGACCTAAAATGTATATTTTAGAAGCATTTTGCACAGACATCTGTGAGTGATTCAGCACACCACAACTCTCTTACTCTCTTACTTTTTTTAGAAGCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31254
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050597 Nonsense 159 693 5 15

The following transcripts of ENSDARG00000029671 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 6744540)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 7168110
GRCz11 2 7039716
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATTCTCTCTTCCATTCAGAATCTAAACTTCACAGGTTTCCGGAAGATTT[T/A]AAAGAAACATGACAAGATCTTTGAGACTTCTCGAGGCGCAGATTGGCGCG
Long Flanking Sequence:
TAATTTGTTAGTTGTAACTAGAGTGTAAATGTATAATAGAATCTGTGAATATAATACGTTGTTTATATTTTTTGTTGGGTGCACCTAAATTTTCGAAGTTAGGAGCAAGGTGCTACCAAGAAAAAAGGTTAATTTCGAGTACTTCAGAGACTATTAAGCAGGTGTGAGTTGAAGGTAGTTGGAGTTAAACTGTGCAGAGATGCGGCCCTCCAGGAACTGAGTTTGAGACCATTGCTCTAACACATATGAGCACATAGAAGTATTTGGACCTCTTTTGCTTGCAGTCTGGATGAATCCCTAAATGATTGAAAACATTTTATATTAACGTAACACTTTCCCATCAGTTGTGACCCAGTTTTTGAGTAATTCCAATTTAAGTCAAGCAGTTTTATTTATTTATTTTTTTTCAATTTCTAATAAGCTTTTAATCTACATCATGTTTACTGTGTTAATTCTCTCTTCCATTCAGAATCTAAACTTCACAGGTTTCCGGAAGATTT[T/A]AAAGAAACATGACAAGATCTTTGAGACTTCTCGAGGCGCAGATTGGCGCGTGGCCCATGTGGAAGTGGCTCCTTTTTACACCTGTAAGAAGATCACACAGCTCATCTCTGAAACTGAGGTACCATTGCACTTAAAAACACTCATTCCAATTTAAAATATATGATGTTTTTAAGATAAGGAAATGTAATGTCTCACTGTTTTAAAATGAATTTAATTGCCCTTTATACAATATAAGAAACACACTTTTGCTATGAAGCATCACACTAGCGCAACGCTTGGTTATTCTGACTGAATGTTCTGAAATTTGCAGACACTTGTTACCACAGAGCTGGAAGGAGGCGACCGACAGAAAGCCATGAAAAGGCTCCGAGTTCCTCCACTGGGAGCTGCGCAGGTAGAATAACCTGAGACCTTCACTACAACACATTTTCATTAATGCCATTAAAAGCACATGAAGATCTCACCTTCCTGTGCTCTTTTTCTTAGCCTGCACCAGCATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6825
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050597 Nonsense 445 693 11 15

The following transcripts of ENSDARG00000029671 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 6750846)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 7174416
GRCz11 2 7046022
KASP Assay ID:
554-5468.1 (used for ordering genotyping assays)
KASP Sequence:
TGTCAATGTGTTTTTGTTTACAAATCAGGTGAACGAATTTGTTACTCGTA[T/G]TCATATGGAGTACGAGCTGTAATCAAGTGTTTGCCTGCCTGGTTCCGGTT
Long Flanking Sequence:
TCATTGGTAGAACAGCCCAGACAAAAGTATAGATGCTCATCATTTTGTTCATGGTATGTGGCTTGGGGTAACAGTAATCACTTGGTGCAGAAGAATAAATCAGGCTTTAGCATTAAATATACTGTTTAATGTATTAAACACCATTACATTTGTAAATAGTTTATTAACTTCCTCTCTTTTCTAGTGCTTTATTTTCCACCTTTTTCTGTTCGTAGTTTCGAGTGGTCACCGCTCCATTTCACAGAGTGGGCTTTGCAGATTTCTGGCTGGCTGACCAGCTCAACTCTTTAGTGGTTGTTCTGATGGACCTGGAGTACATGATCTGCTTCTACAGTTTGGAGCTGAACTGGACCATGTCCGAGGGAGAGCTGTGGATTAAAGAGGGTAAACATGGGCACATCAATGTCCTTGCAGATTCAGAAATGTTCTATTGGACAGCTACTCATGACCTGTCAATGTGTTTTTGTTTACAAATCAGGTGAACGAATTTGTTACTCGTA[T/G]TCATATGGAGTACGAGCTGTAATCAAGTGTTTGCCTGCCTGGTTCCGGTTTGTGCAATGCCTGAGACGTTACCGGGACACTAAGCGTGCCTTCCCTCACCTGGTCAACGCTGGCAAATACTCCACTACTTTCTTCGTAGTCATCTTTGAGGCGCTCTTTAAAACGCATTCAGGTAAGCACACGAGCTGTTACATTCTTACTCTAAACATCAAATGCTTCAGATGCCATGTGCAATTCTGTGTTTACCCAACACAACTTTGTTGTTTCCACTCAAAACATGTGAAATATGCGGTATGTTGTGTAGAATGCAGCTGATGATACTGTTAATAGAGCTACAGCGGACTTCATTCAGCTAAACACACTGTCCTGTGCTCATGATCTCTTCTCTGTTACCATTAGGAGACGAACGCTTTGTCTTCCTTTACATCATGATTGCCTGCAGAATTGTTAACTCCTGCTACACCTTATTGTGGGACCTGAAGATGGACTGGGGTCTGTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17172
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050597 Nonsense 450 693 11 15

The following transcripts of ENSDARG00000029671 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 6750859)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 7174429
GRCz11 2 7046035
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGTTTACAAATCAGGTGAACGAATTTGTWACTCGTAKTCATATGGAGTA[C/T]GAGCTGTAATCAAGTGTTTGCCTGCCTGGYTCCGGTTTGTGCAATGCCTG
Long Flanking Sequence:
AGCCCAGACAAAAGTATAGATGCTCATCATTTTGTTCATGGTATGTGGCTTGGGGTAACAGTAATCACTTGGTGCAGAAGAATAAATCAGGCTTTAGCATTAAATATACTGTTTAATGTATTAAACACCATTACATTTGTAAATAGTTTATTAACTTCCTCTCTTTTCTAGTGCTTTATTTTCCACCTTTTTCTGTTCGTAGTTTCGAGTGGTCACCGCTCCATTTCACAGAGTGGGCTTTGCAGATTTCTGGCTGGCTGACCAGCTCAACTCTTTAGTGGTTGTTCTGATGGACCTGGAGTACATGATCTGCTTCTACAGTTTGGAGCTGAACTGGACCATGTCCGAGGGAGAGCTGTGGATTAAAGAGGGTAAACATGGGCACATCAATGTCCTTGCAGATTCAGAAATGTTCTATTGGACAGCTACTCATGACCTGTCAATGTGTTTTTGTTTACAAATCAGGTGAACGAATTTGTTACTCGTATTCATATGGAGTA[C/T]GAGCTGTAATCAAGTGTTTGCCTGCCTGGTTCCGGTTTGTGCAATGCCTGAGACGTTACCGGGACACTAAGCGTGCCTTCCCTCACCTGGTCAACGCTGGCAAATACTCCACTACTTTCTTCGTAGTCATCTTTGAGGCGCTCTTTAAAACGCATTCAGGTAAGCACACGAGCTGTTACATTCTTACTCTAAACATCAAATGCTTCAGATGCCATGTGCAATTCTGTGTTTACCCAACACAACTTTGTTGTTTCCACTCAAAACATGTGAAATATGCGGTATGTTGTGTAGAATGCAGCTGATGATACTGTTAATAGAGCTACAGCGGACTTCATTCAGCTAAACACACTGTCCTGTGCTCATGATCTCTTCTCTGTTACCATTAGGAGACGAACGCTTTGTCTTCCTTTACATCATGATTGCCTGCAGAATTGTTAACTCCTGCTACACCTTATTGTGGGACCTGAAGATGGACTGGGGTCTGTTTGATCGAAACGCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19670
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000050597 Essential Splice Site 555 693 12 15

The following transcripts of ENSDARG00000029671 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 6751404)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 7174974
GRCz11 2 7046580
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACGCAGGGGAAAACACCCTCCTCAGAGAGGAGATCGTATATCCACAGAAA[G/A]TAGGAACACACACATACTCATTTAAATGATTTTGCAGAGAACAATTCACC
Long Flanking Sequence:
TGCCTGAGACGTTACCGGGACACTAAGCGTGCCTTCCCTCACCTGGTCAACGCTGGCAAATACTCCACTACTTTCTTCGTAGTCATCTTTGAGGCGCTCTTTAAAACGCATTCAGGTAAGCACACGAGCTGTTACATTCTTACTCTAAACATCAAATGCTTCAGATGCCATGTGCAATTCTGTGTTTACCCAACACAACTTTGTTGTTTCCACTCAAAACATGTGAAATATGCGGTATGTTGTGTAGAATGCAGCTGATGATACTGTTAATAGAGCTACAGCGGACTTCATTCAGCTAAACACACTGTCCTGTGCTCATGATCTCTTCTCTGTTACCATTAGGAGACGAACGCTTTGTCTTCCTTTACATCATGATTGCCTGCAGAATTGTTAACTCCTGCTACACCTTATTGTGGGACCTGAAGATGGACTGGGGTCTGTTTGATCGAAACGCAGGGGAAAACACCCTCCTCAGAGAGGAGATCGTATATCCACAGAAA[G/A]TAGGAACACACACATACTCATTTAAATGATTTTGCAGAGAACAATTCACCGCATTCACATTTACACTTGTGTTGATTTACCGTGTTCTTTCTCAACAGGCTTACTATTACTGTGCCATAGTAGAAGACGTAATCTTGCGCTTTGCGTGGACCATTCCACTTTCTCTTGAAGTTGTCTATGATCGTCCTGTTATTTCCAATATTTTGGGCACTGTTCTCCCACCGCTGGAGGTCTTCAGGTGGGAAATCCAGCATATATACATCGTCACTCACTAACATATTCCAACCTACAACTTTAGGTTAAATGATGATATTTTTTGACATCATAGCTGTATTTCAGCATTCGCTATATTGATCAGAATCCATGACTGAATTTATCAGTTCAGTTTATCTGGTTTCTACCCCATCACTAGTCATGTTTCCATCCAAAGATGAAAATTCAATTTATTGAATTAATTTTTTTATGCTCAATCATCGTTTCCATCCAACGCTTCCAAGAGA
Associated Phenotype:
Not determined