Busch Lab

ZMP

trim55a

Ensembl ID:
ENSDARG00000029596
ZFIN ID:
ZDB-GENE-040718-50
Description:
tripartite motif-containing 55 [Source:RefSeq peptide;Acc:NP_001002358]
Human Orthologue:
TRIM55
Human Description:
tripartite motif-containing 55 [Source:HGNC Symbol;Acc:14215]
Mouse Orthologue:
Trim55
Mouse Description:
tripartite motif-containing 55 Gene [Source:MGI Symbol;Acc:MGI:3036269]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa44543 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa7518 Missense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa44543
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000047055 Essential Splice Site 172 443 3 10
Genomic Location (Zv9):
Chromosome 2 (position 42226104)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 42275568
GRCz11 2 42124986
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAGACCTGTGAGGTCGCTCCACTTAAATCTGTCTATGAGTCCCAGAAAG[T/C]AAGACGTTTACCCATCGTTCTGCTTCCTCTCTCTCCACTGCTGTCTTCAT
Long Flanking Sequence:
TGGAACTTTTTTTTGTACATAGTGTAAAGCACAATTTTAAAATAAAATGAGAATGCACCTTATTTCATTAACAGCTAAGATGATCATGAAAAATATAGCAAAAATGAAAATGTCTTCTTTCCCAATGCTGGGTTGCAGCTGGAAGGGCATCTGCTGTGTAAAACATATGCTGGATAAGTTGGCGGTTCATTCCTCTGTGGCGGCCCCTAATGATGAATACAAGGACTAAGCTGAAGGAAAATGAATGAATGAATGAATGAAAAATATCTTCATAAGGATGCTCAAGGGTTTAGTCAGATCTGTCTGATTGTGTGTAAGCAGCAGTAAACCTGAGCCACAAGTGAAGGAAGAGGTGCTGATGTGCGAAGAGCATCAGGACGAGAGGATTAATATCTACTGCGTGACGTGCTCTGTTCCTACTTGTTCGCTATGCAAAGTGTTCGGGAGTCATCAGACCTGTGAGGTCGCTCCACTTAAATCTGTCTATGAGTCCCAGAAAG[T/C]AAGACGTTTACCCATCGTTCTGCTTCCTCTCTCTCCACTGCTGTCTTCATGATGACTGACCAGTTTATGTGTACATCTACAGACAGAGCTGTCCGATGGCGTTGGCCTGTTAGTTGGAAACAATGACAGAATTCAGGGAATTATCAGTCAGCTAGAGGAAACCTGCAGATCTGTGGAGGTCAGTGTGTTCTTTATTCTTTGTTTAAGAACAGGAACAATACTCAGTTTTTGTACCATAATGCACAACATAAACCTTTATGTAAAGTATTTAAAGTTTACCTTTAACTATTGAACTTTTTCAAGGTTAAAAGTTGTTGAAAGAAAGGTCAAGGTCCCATAATGCAATTCAAAAGCATTAATAAACGACAAAAAAGAACAAAAAAAAAAAAACATGAACCACAAAATACAGAACTGTTAATTAATAAAAATGAACTATTTTTATGTAGTGATGTCCGCGCATGTGTGTTTGTGTGCAGGAGAACGGTCGCAGGCAGAAGTCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7518
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000047055 Missense 283 443 7 10
Genomic Location (Zv9):
Chromosome 2 (position 42223300)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 42272764
GRCz11 2 42122182
KASP Assay ID:
554-4056.1 (used for ordering genotyping assays)
KASP Sequence:
GCAACCAAGTTTTTCTAGTGAAAKTTCTTATCAATATRTCTCTCTTACAG[A/T]ACACGAAGCCTCTGCTACAACAGTAAGAACCAGATATTTATCTTTATTCT
Long Flanking Sequence:
TGTCTCAGTAGTCCTTCATTAGCATAGAAAGAAATTTTCTCAGCTTACAGGGCTAATAATATCGACCTTAAAATAATGATAACTAAAATAATAAAAGTTTTTATTCCAGTAAAATTCAAATAAATAAGACTTTTTCCTGAAGATTAAATATAATAGAAAATATTGTGGGTGTCCTTGCTCCGTAAAACATCACTTGGGAAATAATTGAGAAATAATTCAAATGTCATGTTATTTTTTAACACTTTTCTCTACTACTAAGTATCTTTACGTTTTCATAATGTATAATACTATTATCATCTGTGCAGGTACAGAGAGCATCTGGATAACTCAGCTAAACTAGTGGAGACAGGAATTCAGACAATGGAGGAATCTGAAATGGCTATCTTCCTGCAGGTCTGTGAAGTTCTTCATTGTGATCTTGCATGCTTTTTTTTTAAAGGAATTAAATATGCAACCAAGTTTTTCTAGTGAAATTTCTTATCAATATGTCTCTCTTACAG[A/T]ACACGAAGCCTCTGCTACAACAGTAAGAACCAGATATTTATCTTTATTCTGCATCTAAACTCTTTTATTTAGTCAACTTATTCATTCTCGTCTCTTTAACCTCAGGATTGCAGAAAGCCGGAATGTGTCTCACTTAGAGAAGGTTGAGCGTGGATATGAAAACATGGATCATTTCTCTGCAAACTTCCAGTCGGAGCGAAGAGCAATCCTCAGTATAGACTTTATCAAGGGTAAACCAACTCTAATCCTTTCAGTTTAATTTTAGTCTGTCCCTTTATTGACCTTATTCTTATATGTTAAAGCAAGCACAGCCATCGGAACCTAATTGGCCTAAAAGACTTCTGTTCTCATTCACTTAAACTTAAAGAACAAGCTTGTTATGCTGACTGATTTTACAAACTGTTATTTTTATATATTTAGTCATAAGCACACTTGTTTGTAGAGAAAGTAGTTTGACCGTTTGTTATTCCAAGCCATTTTTCTTAGGGTTGCACATCATT
Associated Phenotype:
Not determined