ZMP
ldlr
Ensembl ID:
ZFIN ID:
Description:
low-density lipoprotein receptor [Source:RefSeq peptide;Acc:NP_001025454]
Human Orthologue:
LDLR
Human Description:
low density lipoprotein receptor [Source:HGNC Symbol;Acc:6547]
Mouse Orthologue:
Ldlr
Mouse Description:
low density lipoprotein receptor Gene [Source:MGI Symbol;Acc:MGI:96765]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa33138 | Nonsense | Available for shipment | Available now |
| sa16375 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa33138
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000046297 | Nonsense | 371 | 911 | 8 | 18 |
| ENSDART00000146955 | Nonsense | 371 | 870 | 8 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 19133910)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 19162272 |
| GRCz11 | 3 | 19312012 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCAACCCAGACACCTGCAGCCAAATCTGTGTCAACCAGATGGGTAGTTA[T/G]AAGTGTGAGTGTGAGGATGGCTACCAGATGGACCCAGCCAGCAAGGCCTG
Long Flanking Sequence:
GTTCATTTTTGTAAGTGCATTAACTTTAAAAAAAGATCTACAATATATACATTTTTCCCAATTCACAGACTCTAATGAGTGTCTTTACAACAACGGTGGCTGCTCTCATATCTGTAATGACCTGAAGATTGGTTATGAGTGCTTATGTCCTACTGGCTTCCGGTTGGTGGACAAGAGACGCTGTGAAGGTAAGAAACTGAAATTGGTTCCCATACTGAAATGGTTCAAAGTACGTGCCACCTCAGAAATTTGTGCTGATCCAGTTCAAACAACTATTGAATTTAGACTTTAAATTTGTTTGCTTTTTAAAAGTTGGATATAAGCTTTGAGTTTGCTTAGTGAGTTGACATGCTTGCTAACTTCAATGATTTAGTGATTTTACAGACACCAGTTTGATGCAACAAAACGACCCTTTAACTTTATTTGATTTCTTCAGACATCGATGAGTGTGCCAACCCAGACACCTGCAGCCAAATCTGTGTCAACCAGATGGGTAGTTA[T/G]AAGTGTGAGTGTGAGGATGGCTACCAGATGGACCCAGCCAGCAAGGCCTGCAAAGCTATTGGTACAAGTTTTACCCATCCACCTGGACTTTTAATATGGCCTCAATCTGACAATCTCAAACTTTAATATATATTTCAACAGGAACTATCGCCTACCTATTTTTCACCAATCGCCATGAAGTAAGGAAGATGACTCTGGATCGCAGTGAATACATACGCGTCATCCCCCGCCTGAAGAACGTTGTTGCACTAGACATGAATATTGCTTCCAGAGATATCTACTGGTCGGATTTATCCCTGAAAAAAATATACAGGTAAAAAGATCTTTGAAGATCTTCATCAAACAGACGTGTGGAAATCATTTGCTTGTAACCGAACAGACTGGTGCCTGGTGTAATTGTATCAGCTCTTCATTTCCAGAGCCCCAATGGATACAGCGGACAACTCATCCCAACACAGCATTGTGGTTGGCAGTGACTTAGATGCACCAGAAGGTATCGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16375
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000046297 | Nonsense | 657 | 911 | 14 | 18 |
| ENSDART00000146955 | Nonsense | 697 | 870 | 14 | 18 |
Genomic Location (Zv9):
Chromosome 3 (position 19136226)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 19164588 |
| GRCz11 | 3 | 19314328 |
KASP Assay ID:
2259-3287.1 (used for ordering genotyping assays)
KASP Sequence:
TAACAGATTCTCACCCAAATACACATGTGCCTGTCCAGATAATATGATGT[T/A]GGCCAGAGATATGCGGAAATGTGTACCAGGCAAGTCAAATTTAGTAATTG
Long Flanking Sequence:
GTCGGCGTACTCTAATCATTGACCAAGGCAAACTTGCGCACCCTCTGAGTCTCACTGTTTTTGAGGTATGTATTTGGGAAGTTCTTGTTAAAAGACACCTTGTTTAGGAGTAACCCTCAATGCTCACCCAAGCTTTCCTCATCTTCAGGAGAAAGTGTTTTGGACGGATGTAAGCAATAACGCCATTTTAAGTGCGAACCGCGTCACCGGAGGAGACATCACAAAAGTGGCCGAACACCTCTCATCTCCAGAGGACATTGTTCTTTTCCACAACCTCAAACAACCTACTGGTGTGTTAGCCAGAGAATAATCAAAAATTTGCCTTTAGAGTACTTTCCGAATCACTATTAACTAAGTTGGTTTCTTTATTCTTCATGTCCTCCCAGGAATCAACTGGTGCAGGATCAATAACGGTGGCTGTGAGTTCTTGTGCCTTGCTGCCCCTCAGATTAACAGATTCTCACCCAAATACACATGTGCCTGTCCAGATAATATGATGT[T/A]GGCCAGAGATATGCGGAAATGTGTACCAGGCAAGTCAAATTTAGTAATTGTTGTTAGGATTTTCAATTCCTACAGGATACCGATTCCTACATTCAAAATTTTTGTTTTTCTTTTAAACAGCTGTAGTGACAGCTGCAACTCCTGTCAGGCCTGAAATACCCACAACCATTCGTCCTCAAGTTCCTTCAGAAACGACACCAAAACCTGCTAGGCCTTCCACTACCAATTCACAACCTTTACCTACTCCGGCTCCCAAGATCCCTAACAGACCCACTCAAGCTGCCACTTTGGTGCCTTCACAGGCCACAACTAAACTTCCCTTTTTCACCCAGACAGGTATGTCCTGCTTTACCACTGAAGAAACTCAAACCTGAACTCAAGACCTCAGAAATTCTTGAACCCCTACTCAAAGATATTACAGTGAATCTGTAATTTGTGAAAACAAATTGTGATTTCTCTATTAGATGTCCACTTTGGTGATGTTAAGGCTGTCTCTGATA
Associated Phenotype:
Not determined