ZMP

syt9b

Ensembl ID:

ENSDARG00000029239

ZFIN ID:

ZDB-GENE-040822-6

Description:

synaptotagmin IX [Source:RefSeq peptide;Acc:NP_001003985]

Human Orthologue:

SYT9

Human Description:

synaptotagmin IX [Source:HGNC Symbol;Acc:19265]

Mouse Orthologue:

Syt9

Mouse Description:

synaptotagmin IX Gene [Source:MGI Symbol;Acc:MGI:1926373]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6802	Nonsense	Mutation detected in F1 DNA	Not yet available
sa38033	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa6802

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > G

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000049992	Nonsense	235	517	3	7

Genomic Location (Zv9):

Chromosome 25 (position 16217512)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	25	15764056
GRCz11	25	15860456

KASP Assay ID:

554-5430.1 (used for ordering genotyping assays)

KASP Sequence:

GACGGTCGACGAGCGGACAGTTGCGGACGCCTGCACTTCATCATYAAATA[T/G]GACTGTGACTTGGAGYAGCTCATTGTCAAAATCCACAGGGCCCAAGATTT

Long Flanking Sequence:

TTGTTTAAACTTTTTTGCAGCTTAGGTTAATATCATGACAATACAGAATGTCGTTATTAAAGCTTCTGCAATTTATCGTGACAAGAACATTTGATATGTTCTTAAGCCTATACTGTTAGGTGAGTCATGTTTTCCTGAATACATGAGCTGTAATCACTAACCCACCATTGATATTCATTCAGCAATTCCCAGTTGGCATTTGTCAGACAGTGTGGGCCCCTGTGACCTTCAGCTTTAATTAAACTCCGTCTCAGTCTCGTTATTCAGAAGATGTCTAGCATATGACATCCAACCCCTCCTTTCTTCAGGCACAACTCCATCCGGAGACAGATGAACGTCTCCAACCCGGATTTCAACATGGCCCAGTTCCAGAGACAAGAGTCCATCACGGGTCCAGGCCTGGGCCGCATTAAACCCGAGCTCTACAAGCAGCGGTCGGTGGACACGGACGACGGTCGACGAGCGGACAGTTGCGGACGCCTGCACTTCATCATCAAATA[T/G]GACTGTGACTTGGAGCAGCTCATTGTCAAAATCCACAGGGCCCAAGATTTACCTGCCAAGGACTTTACGGGAACTTCCGATCCTTATGTGAAGATCTACTTGTTGCCAGACCGGAAGACCAAGCATCAAACCAAGGTGCACCGCAAGACTCTGAACCCAATTTTTGATGAGGTTTTTCTGTTCCCCGTGGCATACGGCGAGCTTCCGACTCGCAAGCTCCATTTCAGCGTCTACGACTTCGACCGCTTCTCTAGACACGACGTCATCGGCCAAGTGGTGGTGGACAACTTTTTGGATCTACCGGACTTTCCACAGGAAACCAGGCTCTGCAGGGATATCCTTTATGTTAGTGCGGTAAGTCGTGCCTTTTTGTGTCTATATTAGTAGTTGACAAATAGACAGTAAAAATGCTTGATTGAAGAAACACTTTCTTTATATTTATGTAGTTTGAAGTCTGATGTTTGAGAAAATATAAGCTAACTTTTACAAACTTTAGGTCA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa38033

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000049992	Nonsense	385	517	4	7

Genomic Location (Zv9):

Chromosome 25 (position 16243759)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	25	15790303
GRCz11	25	15886703

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGCCAACTGCGGGTCGTCTGACGATAACCATAATTAAAGCCAGAAATCTT[A/T]AAGCCATGGACATCACAGGAGCGTCTGGTAAGTCTCGTCACCTCTAAATG

Long Flanking Sequence:

TGTGTGCGTCACTTTATTTGCCTTAAATTATTGCATGAAATGTTTTTGTTTCCATTCGACAGAGGACAAAAACATTGACAGCCTATTAAAATCCAGTGCTTAAACGAACACATGAATCAACCAAAGTAAACAAAACATGCATTTATGTACAGTAGAGTTATTGTTCTCTATCAATATCAACACTATTTTATACACTCAAAACAATAAACAGTAAAAGTCACTAAACTTTCTTTTTTAAAGTGTGACCCAGTATTTTGAAACCAGTTATGTTGTTTATATAATACGAATGAAGAATTGAATAGCCTGTAACAATAACCAGAAGCTCTGTAAATGTTATTTTATTTGCTCTAAATCAACTTCTATGATATGATTGTAAGAGTTAATGTTTCCTGTTTTTGTCTCTTCAGGATAATGTGGATCTGGGAGATCTTATGTTCTCTCTTTGTTACTTGCCAACTGCGGGTCGTCTGACGATAACCATAATTAAAGCCAGAAATCTT[A/T]AAGCCATGGACATCACAGGAGCGTCTGGTAAGTCTCGTCACCTCTAAATGACTCGATGTCTCAGTGGTAACGATTTGTTTTGGTGTCATCATGACATGGTAAAACACAGAGCACCCTAGGCTCTCTAAAAGAGCATTGATTTCATCGACTAAACGCTTGAGAAAGTGATGGGAGATTTTACATATGCAAGTAGTGCTAAGTGGGGTTGGGCAAAATCCACAATCTCTTTCTAAGGTCATTTATGCAAAGCACACAGGATGTTGCTTTGGAGTTGAAATCCCATTGGCAGGAAGAAGAATTGATTGTATATGGAAGGGTTTTTGCATCTTGATCCATCTCTAAAAATATATATGAATAATTAATATAATAATAGTTTTTAAAAATAATATTATTGTATTAGTATTTTATTTAATTAAATATATAAATAATTGAATTTTTAAATTATTATTAAATTAGCATTATTAGCCCAGATGTTAGTTTTAGGGCAACATTGCACTAAA

Associated Phenotype:

Not determined