Busch Lab

ZMP

taf1b

Ensembl ID:
ENSDARG00000028937
ZFIN ID:
ZDB-GENE-041008-2
Description:
TATA box-binding protein-associated factor RNA polymerase I subunit B [Source:RefSeq peptide;Acc:NP
Human Orthologue:
TAF1B
Human Description:
TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa [Source:HGNC Symbol;Acc
Mouse Orthologue:
Taf1b
Mouse Description:
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B Gene [Source:MGI Symbol;Acc:MG

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa13173 Nonsense Available for shipment Available now
sa30716 Nonsense Mutation detected in F1 DNA Not yet available
sa29382 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa13173
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000049224 Nonsense 285 576 9 15
ENSDART00000062377 Nonsense 287 562 9 14
Genomic Location (Zv9):
Chromosome 20 (position 29549276)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 29620489
GRCz11 20 29523368
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTGGCAAAGATCATGAAGTTGCCGTCCTTCCCAACAATTTCTCAGGATTG[T/A]CTTTTCCACCCAGTTCCACTCACTGTCCGCTATCTGCTAGAGGCAAACCT
Long Flanking Sequence:
AACACAAATGAATCACGAAAATTAAAAGACTAAGCCAACATCAAAAATCAAACATTAATCTTAAACAAATTAAATAAATCAAATTACCTTATTTTCCCTTAAGCCAAGAGCTAAAACTCATAAATGGGGAATCCGTGAATTAGCCGTTTACCCGTGCCTTTTTGCGGTGTTTAATAAACAATAAATAACAAGAAAGACATCTGATTTTGCAATCATCTGTTTCTTGCAGGATGGTCGCAGAAGGCCATATTCCTTACTTGCACCTTCACGAAACATTTCCAGCAGAGATGAGAATGTTCGGGAAAGATGTCCAAATCTTTCGGGTTCTGGTGAGGAACATATAAACAGTTCTCACTTCACCACTCATGAATCATTGTGTTTCATTCTATACCAACTTCTCTTCTTTAGTTCTTTCCATCTTATGCGTTCATCAAAAAAGAAGCTTTAGTTCTGGCAAAGATCATGAAGTTGCCGTCCTTCCCAACAATTTCTCAGGATTG[T/A]CTTTTCCACCCAGTTCCACTCACTGTCCGCTATCTGCTAGAGGCAAACCTTCCAGGTGAGTGTTTTTTTTTCACTGTAGTGGAGACGTTGTGGTAAATTATGAAAATGGATTTCAAACAAATCTATCCAACCCATATAATCCTCTTTTTTTGTGTGTGTTTGATACACTCCTGACTCTGCATGTTCATTTTAGATGCTCTTCATGTTTGGGTCCAGAAGGTTATAACTGGAGCTGGTATGGATAGCGATTCCTTTCTGACGTTTGACCCCACTGATAAGAAGCCTCATCTCTTGAGTTATGATGTTCAAGCAGTAGCTGTCATTATTGTGGCCATGAAGCTCCTTTTCAAGTTGGATGATCATGTGGAATGGTTTGTCACTTCTTTATTTTCTGTAAAGCTCCACAGTTAATTTGGATTTAAAGCAATCTTATTCCCACACGACACTAACTATTTTTTCATTCAAAAATGCTAATTAAATTTATGCGCAAAGCTGGATTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30716
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000049224 Nonsense 383 576 12 15
ENSDART00000062377 Nonsense 369 562 11 14
Genomic Location (Zv9):
Chromosome 20 (position 29545966)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 29617179
GRCz11 20 29520058
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATTGGTAACGTGTTCTCGCATGCTTATCAGTCTTCAGTTTAGAAAGATG[G/A]TTTAACATCGTACAGCCTGTTTTAGAGCAAGCCAGACTCAAGGAGGAACA
Long Flanking Sequence:
ATTAAAACACTCAAAATTCAATGAAAGAGGTGATCATCACTTTTATGTGTTCAAGTGCATAGTGCGGAGGATATCCTATAGTCTTGAGGCAATCAGATGTAAATCACAGTATTAAGAAGATTTGACCTGACCAATTTTCTATCAGTTATTTTGTTATGCCATTAGGTGTTAAAGTTATTTGTTTTTTAATTATTTCAAAATAATAAAAGTCTGAGTTAATCTGGCAGTTTTTTTTTTTATTTAATTAGAACAAATTTTTCAGGCAAATAAAATGTTACAATAATTTAGGATTTCAGATTTTTTTTTCTAAAAAAAAAAAGTTGTATGCGTTATCTAACTGTTTATTCTTTTCATTATTGTCTCAAGGAAATTATCTCATGATGCAGCCAAGAAGAAGAATAATAAAGGTAAAACCATTTCACTAGATATTTATTTTTGCATATCATATCATATTGGTAACGTGTTCTCGCATGCTTATCAGTCTTCAGTTTAGAAAGATG[G/A]TTTAACATCGTACAGCCTGTTTTAGAGCAAGCCAGACTCAAGGAGGAACAAGAAGAAGCTCGGTAAAACACAATCATCCCAGTAATCTCTGTGACTTTATTGACAGCTCATTCACTGCAAACACTTCTGCTCTTCTCTGCTCTTTCAGACGGCAGTGGAATTTTGCTAACCCTTTCATCACAAATCTGAAGCGCAAGTCCCTAGTTCTCAAAAAGAGACGTAAGCTGATTAGAACACATCTCAGTGAATTTATCCTCAGTCCTTTAGTGTGTTTTTATCTGATCAAATGCTGTCCACCTTTATATCATCTCCAGGTGTGACTGATCATTTGCAGCAGAGATTTCAGAAGTTTGCAGATCCTGCACCAGAACAGTCCACGTCCACGACAAACTCTCACACCAGCTTCCGCTTCAGCTGGGGAGAGGAGGAGGGTTCAGATGGACCCAGTATGTTTAACCAGAATTTGGACTGTACTGTTAAGGCAAAAGCGGTCAATGGCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa29382
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000049224 Nonsense 562 576 15 15
ENSDART00000062377 Nonsense 548 562 14 14
Genomic Location (Zv9):
Chromosome 20 (position 29540446)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 29611659
GRCz11 20 29514538
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCTCAACGTTGAGCGACGCTTCTTAAAGAAAAATTATCGGCTCGACAGT[C/T]GATTGACTTCTTCTCATCTGAAAAAGAAAAAAGGTCCAATTTTGTAACTC
Long Flanking Sequence:
AATTGCAATATTGTTCAAGAAAATCTTGACTGGTTTCTTTTGGCCATATCGCACAGCCCTATTCTGAATGCAGTCAAATAAATACATGTTTATAATATTTGTAAAAGCTTCATATATTCTTTTTCAGGACTGTCAGCCTATTTTACATCATTTCTGAATGTAATTTCAAGCCATATTACTTGCCCTTTTTTTCATTCTCCTATCTCTCAATTTTTATGAACTTATTATTACTCAGATTTAACTCAGAACTTAATTTCTTGAAAATATAGTCCTGTATACTTTGTATGTTTGCTCGCTAGTATATTGATTTAATCTCCCTTTTCTCTTTTTACAGTAAATGTGTTAGTCATTTCTCAAAATTTGAGCCCAGTTTACCTCGGATGTTCGTGTGGGTGCTTGATCTCTTCTCGTTCATTCTGGGTGTCCTTCAGTCTGACGTGTACGAAGAGGTCCTCAACGTTGAGCGACGCTTCTTAAAGAAAAATTATCGGCTCGACAGT[C/T]GATTGACTTCTTCTCATCTGAAAAAGAAAAAAGGTCCAATTTTGTAACTCATGCTGGTGGAGAGAATATCACAAACACAGACTGAATTCAGCATACCAGCTTCCCAGATTCCTTTTCTTCTCCTCTCAACAGCAGGAAGACTGGTCAGACTTTCATAGTGATGCCTTGTCATTTTCAGTAGTGTCTTGCAGAGTTTAGTTCTGTGAGTTTGGGAATTAACAGTATCTGTTGCCTTATAAAAAAAGACAGGTTTGCCTTGTATGCATGGTGTTGTTTTGATTAAAGAAATGCAACACTTACATTGGTTGTAGCTCCACAAATGAACCAACAGGGGGAGTAATGAACCTTACAATTGAGTGCTGATGGATTCTTTTGTCCTGCAATTCTCAAACATTTTGTCTAATGTTTGAGCAAAATGCGTAGCAAAACTAATTCTGCTGAAAGGCTGAAGTAGTTTTGTATATGAGCAGTCTTTTTACTTTATTTACTCTTTTAACTAT
Associated Phenotype:
Not determined