ZMP
zgc:91836
Ensembl ID:
ZFIN ID:
Description:
probable tRNA pseudouridine synthase 2 [Source:RefSeq peptide;Acc:NP_001002200]
Human Orthologue:
TRUB2
Human Description:
TruB pseudouridine (psi) synthase homolog 2 (E. coli) [Source:HGNC Symbol;Acc:17170]
Mouse Orthologue:
Trub2
Mouse Description:
TruB pseudouridine (psi) synthase homolog 2 (E. coli) Gene [Source:MGI Symbol;Acc:MGI:2442186]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa2286 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa2286
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000039091 | Nonsense | 121 | 341 | 5 | 8 |
| ENSDART00000134293 | Nonsense | 132 | 343 | 5 | 8 |
Genomic Location (Zv9):
Chromosome 6 (position 40957263)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 41028863 |
| GRCz11 | 6 | 41026399 |
KASP Assay ID:
554-2534.1 (used for ordering genotyping assays)
KASP Sequence:
GGYAATAATTTTATAATAACTGTTGTGTTTATTTTATATATGAAGGACTA[T/A]ACGATTGAGGGCGAGTTTGGAAAAGCCACCGATAATTTCAGTCACACTGG
Long Flanking Sequence:
TCTTCTGGAGTGTTAGGTGACCAAACAATTAAAACCCTAAATTATGAAGTGTTTAAATATGTAATGTTCTCGATGCTCAGTTCTCTGATTTCTTTGTCTCAGTATTAGGTGTTGGGAAAGGAAATAGTGTCCTGGAGAATCTGTGCAAATCACATGTAACCAGGGTAAAGGTTTTTTTTTTTAATGCTATTCTGTTGGATGCATTCATTGCTTATTTTTATATTTGTCCTAAATTGATATACTAGTCAACACTTGAATTGGTTCATCACCTTTAATCAAGATGTCCTAAAAATATTGAACAGCACCCATTTTTGTTTTAGGACAATTTTGGAAAAAAAAAATTTGATCCACTTCATATGTTGACTACTGTATATTTAACTAATAGATTTTTATTTTATACTATCTGATTTTTAACTTAACCCTGTAGATGTTTACTATACATGCATTTATGGCAATAATTTTATAATAACTGTTGTGTTTATTTTATATATGAAGGACTA[T/A]ACGATTGAGGGCGAGTTTGGAAAAGCCACCGATAATTTCAGTCACACTGGTCGGGTCATTGAGAAAACTACATATGGTAATATGTTTATTACACTATCAAAATTATTAACCTTAATATCAAGAAACTGCAGTGCTTCCCACACATAGACTTTACTTGGACAGGCTGCCCAGGTATATTAAGTGACACCTTTTTTTTTACTATTATCATCCTTTTAAACTTTTTTTGTATCTGCCCAATATAAACAAACATCCGTGAGCGATTAAGTAGTGGATATTCTTCGATCCTTTACCCATTTCGTACTGCTCGTTCTGTGTGCACGAGAACTGTCAAAACTCCCACAGACAGTCTCACATGTTCTGGAGACCCACAGAGACCCACACCTTTTTGCCTTCGGGTGGAGTTTTTAAATCCTCTAAAATGTCCGGGATTTGGTTTTGTTTTTTAAGCTGTCATTAATTTTATGTGCACAGCTGCTAGAGCAAGAAAAATATTAAATAAT
Associated Phenotype:
Not determined