ZMP
si:ch211-130o18.2
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate hyperpolarization activated cyclic nucleotide-gated potassium ch
Human Orthologue:
HCN3
Human Description:
hyperpolarization activated cyclic nucleotide-gated potassium channel 3 [Source:HGNC Symbol;Acc:1918
Mouse Orthologue:
Hcn3
Mouse Description:
hyperpolarization-activated, cyclic nucleotide-gated K+ 3 Gene [Source:MGI Symbol;Acc:MGI:1298211]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa25085 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa6545 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa25085
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000039325 | Nonsense | 247 | 639 | 2 | 7 |
Genomic Location (Zv9):
Chromosome 19 (position 9822878)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 9281417 |
| GRCz11 | 19 | 9200342 |
KASP Assay ID:
554-7763.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAAATCATCCTAGACCCGCAAATCATCAGCCGGCGTTACCTGCGAGGATG[G/A]TTCCTGGTGGACTTCATCTCCTCCATACCAGTGGACTACATCTTCCTGAT
Long Flanking Sequence:
AAACTGTTATCATACCATAAAACAATGTTTATTTATTTATGCTTGTAATTTATTATCATTTATGCAGATGCACTGCATATAAAAAGACTTCAGACCATCCCGGTCAATCTAAATCAATGAAATCTTTCCAGATAGAGCTATTCAGGTCATCTGGTGAAATAATTGTGGCAAAATAAAGCATTGCAGTGTTCAATCTTTCCAATATCATGCAGCCCTACACAAATCCATTCTTTGTTCCTTACATCATGCATCTCCACAAACAGGTTTTACTGGGACTTGGTGATGCTTTGCCTGATGATGGGAAACCTGGTCATCCTTCCCTGGGGCATCACCTTCTTTGAGGACCAGAACACCCTGCCGTGGATCACCTTTAATGTGGCCTCTGACACACTTTTCCTGGCCGACCTCGTCTTCAACTTTCGCACTGGCATTATGGAAGGTGACAACTCTGAAATCATCCTAGACCCGCAAATCATCAGCCGGCGTTACCTGCGAGGATG[G/A]TTCCTGGTGGACTTCATCTCCTCCATACCAGTGGACTACATCTTCCTGATAGTGGACATAGAGTCCCGGCTGGAGTCAGCGGAGGTGTATCGCACCGCCAGGGCTTTACGCATCGTCCGCTTCACCAAGATCCTCAGCTTGCTCAGACTGCTGCGCTTGTCCAGACTTATACGGTACATTCATCAGTGGGAGGAGGTGAGCAATGGATTAGGGAAATCAAGATTAGGATTGCCAAAATGGTTAGCTTACACTTTTTAGTTTATGTTTTTTTAAGATCAAGATTGATGTATTAACTTGGTCCTCCTGAGAAGTTACTTTTCTTTTTGCATAGCATAACGAAGACTTTGTTGGCTATTTTTAAATATTAATCAAATATTTTTTTGAAATATGTAGTAAACAGTAATTTATTCGCAAATGCAATCGTTTAAATTTCCAAATTTTGGTTAACATAATGAAGACTTTATTGGCTATTAATTTTAGCTATTAGTCACATTCAGACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6545
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000039325 | Essential Splice Site | 439 | 639 | 4 | 7 |
Genomic Location (Zv9):
Chromosome 19 (position 9827634)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 9286173 |
| GRCz11 | 19 | 9205098 |
KASP Assay ID:
554-5427.1 (used for ordering genotyping assays)
KASP Sequence:
CCAACCTGGTCCAGTCTTTRGATGCTTCCCATCGTCAGTACCAAGAAAAG[G/A]TACAAGCTRATAAGTTAAGSCTTTTTGAGACATCGTTTTCTTCTTTTGAC
Long Flanking Sequence:
TGCATGGGATGCGCACTCCAGAATCTCGCCGGAAGTAGTAAGTCATCCGGATACTTCTCGCATACTGATCTTCGAATTCTACGAATTCGACATACTACTCGGCTCGCATACTGATTTTAGCGTACTATATAGTATGGGAGTAGGCGGTTTCGGACGCAGCCTGTATGTTGATATCTATTGAATTAGTTTTAGTAATGAACTGCTAAATTTATTTTTGTAAACTACATTTGGATATTAATAACGACCTTGATAAAAATTTACTATTTTTCTTTGTATATCAGAATTCCACTTGGGACGTGCAATACTCCTACGCCTTGTTTATGGCCATGAGCCACATGTTGTGTATTGGATATGGTGCTCAGGCTCCCGAGGGACCCACTGATGTCTGGCTCACAATGATCAGCATGATAATTGGCGCCACTTGCTATGCCATGTTCTTGGGCAATGCCACCAACCTGGTCCAGTCTTTAGATGCTTCCCATCGTCAGTACCAAGAAAAG[G/A]TACAAGCTAATAAGTTAAGCCTTTTTGAGACATCGTTTTCTTCTTTTGACAACAGTTTGGTTGTTTGGTTTGTTACAGTACAAGCAGGTGGAGCAGTACATGTCCTTCCACAAGCTGCCAGCTGACATGAGGCAGCGGATCCATGATTATTATGAGCACCGCTTTCAGGGCAAGATGTTCGATGAGGAGAATATCCTGGAAGAGCTCAGCGACCCACTAAAAGAGGTTACTTTTAGACTTTTTCTTTTCAATTTAGTAATAGGAGGATTACTTTTTATTTAAATGTTCTTATTAGGGCCGCACAATTATCATTATTGCGATTATAGTTTATGAAATATATTTAATGCAGACCTGTGATGAATTACATTTATTTTATGTATTGGTTGTTTATCTAAATTAGACCGTTCAGATGGGATCTTATTGTCTTTGACCTCCCCGACCCAATAGTTGCTGCTATGCTATTAGTTGGAGTGAACCCAGAGCTGAAAATAAATGCTTGT
Associated Phenotype:
Not determined