Busch Lab

ZMP

zfr

Ensembl ID:
ENSDARG00000027109
ZFIN ID:
ZDB-GENE-030131-378
Description:
Zinc finger RNA-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q6PCR6]
Human Orthologue:
ZFR
Human Description:
zinc finger RNA binding protein [Source:HGNC Symbol;Acc:17277]
Mouse Orthologue:
Zfr
Mouse Description:
zinc finger RNA binding protein Gene [Source:MGI Symbol;Acc:MGI:1341890]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa40526 Nonsense Mutation detected in F1 DNA Not yet available
sa30863 Nonsense Mutation detected in F1 DNA Not yet available
sa33675 Nonsense Mutation detected in F1 DNA Not yet available
sa40525 Essential Splice Site, Nonsense Mutation detected in F1 DNA Not yet available
sa15440 Nonsense Available for shipment Available now
sa40524 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa40526
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362 None None 478 None 15
ENSDART00000074789 Nonsense 58 1074 3 20
ENSDART00000129415 Nonsense 58 1057 3 21
ENSDART00000026362 None None 478 None 15
ENSDART00000074789 Nonsense 58 1074 3 20
ENSDART00000129415 Nonsense 58 1057 3 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42757467)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40538732
GRCz11 5 41138885
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGCCGGCCGCTGGGGTTGCATACACCCACCCCACTACAGTGGCCAGCTA[T/A]ACTGTACATCAAGCACCTGTGGCAGCGCACACAGTGGCAGCAGCCTATGC
Long Flanking Sequence:
TTCAAGTGAAAGCCACCCTAAGTCTTTTAATCCATTACTGATTGGGTTTCCTCCCTTGACGTGTATCTTCCCTTTCAAGCCAATGGATTTAGTGCATTAAATCCAGAAATCTATTATGAATCTAACTGAAAGATAATCTGCTGTAGCTTCAGTTGGACATTAACATGAACACAAAATTGCGTTGAAGGTCATAAGTATAATCTTCTTGTTGAATTCGACCAAATTGAAATCAGTAAGTTATTTTACTCCATGTGTAAGCATTATAATTGTATCATTAGTGTAGCCGAGTCCTGATGCCATGTTTTTTGAAGTACCTTTTTGGATGTAGTAATTATTTAATAATAGTATTTTTGCTCAATTTCAAACGCCACTGTTCAGCATTGGCATTTGTAACAATGTAAGCTGTCAATGTTGTAATCCAGGGATTTTTGTCCTGTCTCCTGCAGTCAACAGCCGGCCGCTGGGGTTGCATACACCCACCCCACTACAGTGGCCAGCTA[T/A]ACTGTACATCAAGCACCTGTGGCAGCGCACACAGTGGCAGCAGCCTATGCCCCTACAGCCGCCACGGTTGCTGTTGCAAGGCCTGCGCCAGTCGCTGTAGCGGCTGCGGCTAATGCTGCAGCTTTTGGGGGATATCAACCAGCCCATGCTGCCACGGATTATGGATATGCTCAGAGACAGCCAGAAGTACCCCCACCACCACCTCCAGTCACCTCACAAAACTACCAGGTAAGAGGAAGGAGCATGCTTGTTGTAATATAGTTTGGGTTGGGCAAGATATTTATTTCTTTTTTTGCATAAATCCAAATCTGGATCACTGTTTTGCATTTTTTTTTCCTGTGCTTCTGAAGTGCATTTTTAAGTCAAATTAATTTTGAATAAGTACGAAATGAGATGAGCATTCTGTTTACTGTTGCAGGACTCTTATTCGTATGTGCGGTCCACCGCTCCTGCTGTAGCGTATGACAGTAAACAATATTACCAACAACCTGCAGCTACTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30863
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362 None None 478 None 15
ENSDART00000074789 Nonsense 58 1074 3 20
ENSDART00000129415 Nonsense 58 1057 3 21
ENSDART00000026362 None None 478 None 15
ENSDART00000074789 Nonsense 58 1074 3 20
ENSDART00000129415 Nonsense 58 1057 3 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42757467)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40538732
GRCz11 5 41138885
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGCCGGCCGCTGGGGTTGCATACACCCACCCCACTACAGTGGCCAGCTA[T/A]ACTGTACATCAAGCACCTGTGGCAGCGCACACAGTGGCAGCAGCCTATGC
Long Flanking Sequence:
TTCAAGTGAAAGCCACCCTAAGTCTTTTAATCCATTACTGATTGGGTTTCCTCCCTTGACGTGTATCTTCCCTTTCAAGCCAATGGATTTAGTGCATTAAATCCAGAAATCTATTATGAATCTAACTGAAAGATAATCTGCTGTAGCTTCAGTTGGACATTAACATGAACACAAAATTGCGTTGAAGGTCATAAGTATAATCTTCTTGTTGAATTCGACCAAATTGAAATCAGTAAGTTATTTTACTCCATGTGTAAGCATTATAATTGTATCATTAGTGTAGCCGAGTCCTGATGCCATGTTTTTTGAAGTACCTTTTTGGATGTAGTAATTATTTAATAATAGTATTTTTGCTCAATTTCAAACGCCACTGTTCAGCATTGGCATTTGTAACAATGTAAGCTGTCAATGTTGTAATCCAGGGATTTTTGTCCTGTCTCCTGCAGTCAACAGCCGGCCGCTGGGGTTGCATACACCCACCCCACTACAGTGGCCAGCTA[T/A]ACTGTACATCAAGCACCTGTGGCAGCGCACACAGTGGCAGCAGCCTATGCCCCTACAGCCGCCACGGTTGCTGTTGCAAGGCCTGCGCCAGTCGCTGTAGCGGCTGCGGCTAATGCTGCAGCTTTTGGGGGATATCAACCAGCCCATGCTGCCACGGATTATGGATATGCTCAGAGACAGCCAGAAGTACCCCCACCACCACCTCCAGTCACCTCACAAAACTACCAGGTAAGAGGAAGGAGCATGCTTGTTGTAATATAGTTTGGGTTGGGCAAGATATTTATTTCTTTTTTTGCATAAATCCAAATCTGGATCACTGTTTTGCATTTTTTTTTCCTGTGCTTCTGAAGTGCATTTTTAAGTCAAATTAATTTTGAATAAGTACGAAATGAGATGAGCATTCTGTTTACTGTTGCAGGACTCTTATTCGTATGTGCGGTCCACCGCTCCTGCTGTAGCGTATGACAGTAAACAATATTACCAACAACCTGCAGCTACTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33675
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362 None None 478 None 15
ENSDART00000074789 Nonsense 134 1074 3 20
ENSDART00000129415 Nonsense 134 1057 3 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42757241)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40538506
GRCz11 5 41138659
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACAGCCAGAAGTACCCCCACCACCACCTCCAGTCACCTCACAAAACTAC[C/T]AGGTAAGAGGAAGGAGCATGCTTGTTGTAATATAGTTTGGGTTGGGCAAG
Long Flanking Sequence:
AAATCAGTAAGTTATTTTACTCCATGTGTAAGCATTATAATTGTATCATTAGTGTAGCCGAGTCCTGATGCCATGTTTTTTGAAGTACCTTTTTGGATGTAGTAATTATTTAATAATAGTATTTTTGCTCAATTTCAAACGCCACTGTTCAGCATTGGCATTTGTAACAATGTAAGCTGTCAATGTTGTAATCCAGGGATTTTTGTCCTGTCTCCTGCAGTCAACAGCCGGCCGCTGGGGTTGCATACACCCACCCCACTACAGTGGCCAGCTATACTGTACATCAAGCACCTGTGGCAGCGCACACAGTGGCAGCAGCCTATGCCCCTACAGCCGCCACGGTTGCTGTTGCAAGGCCTGCGCCAGTCGCTGTAGCGGCTGCGGCTAATGCTGCAGCTTTTGGGGGATATCAACCAGCCCATGCTGCCACGGATTATGGATATGCTCAGAGACAGCCAGAAGTACCCCCACCACCACCTCCAGTCACCTCACAAAACTAC[C/T]AGGTAAGAGGAAGGAGCATGCTTGTTGTAATATAGTTTGGGTTGGGCAAGATATTTATTTCTTTTTTTGCATAAATCCAAATCTGGATCACTGTTTTGCATTTTTTTTTCCTGTGCTTCTGAAGTGCATTTTTAAGTCAAATTAATTTTGAATAAGTACGAAATGAGATGAGCATTCTGTTTACTGTTGCAGGACTCTTATTCGTATGTGCGGTCCACCGCTCCTGCTGTAGCGTATGACAGTAAACAATATTACCAACAACCTGCAGCTACTCCAGCTGTGGCTGCTGCAGCAGCCCAACCACAACCCACTGTTGCTGAATCCTACTATCAGACTGGTACGTTGGACTCTTTTTGGCAATTTAAATGAATTGGTGCGGGGGGGGGGGCTTTTTGTAACAACATTTTTTTATTAAATCATCTTCTGACTGTTTATTCCATGAGAGCATATAATGCTTTTGTTTTAATTTTTACAATAATCTAAATTGTATGTACTTTTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40525
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362 None None 478 None 15
ENSDART00000074789 Nonsense 276 1074 6 20
ENSDART00000129415 Essential Splice Site 276 1057 None 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42755956)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40537221
GRCz11 5 41137374
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCATACTCGGGCTATGAAGCGGCAGTGTATTCGGCTGCCTCCTCTTACTA[T/A]CAGCAGCAGCAACAGCAGCAAAAACAGGCAGCCGTTGCAGCAGCAGCCAC
Long Flanking Sequence:
CTCCATTTACCCAGTGTCCTCTGCAGTACAGCCGGTCGCAGCTGCAGCGGCAGCCTCTGTAGTGCCCTCTTACTCTCAGAGTCCCACCTACAGCACCAATGCAGTCACGTACTCCGGTAAGAACATCAAAGTTGTATTATAAAACATCAGTTTCAGTTCCCATAAGTCATCAACAGCATTTATCTGATGCAATACTTTATTTAGAGTTGAAGTGAAACGTCTTTCCGTTATATCATGCTTTGTTATTGAGTGTAGAATTCATTAACATGGCTTTTTTGTTCTTGGTTTCTTTGAGTTTAATACAGAATCAAATCCATGAGGTTGGGATTAAAAGTTTAATACTGCACCAATTGAGCCAGTGAATCTAGGCTTATAGATTTACAGTACAATCCTGTCAGTCTCCATCTGTCCTAAAGCCAATAATTGCTCTTCTCTCTATGCTCAGGAACATCATACTCGGGCTATGAAGCGGCAGTGTATTCGGCTGCCTCCTCTTACTA[T/A]CAGCAGCAGCAACAGCAGCAAAAACAGGCAGCCGTTGCAGCAGCAGCCACTGCCGCATGGACCGGCAGTACATTTACCAAGAAAACTCCCTTCCAGAACAAAACTCTGAAACCTAAACAGCCCCCTAAACCACCGCAGATACATTATTGTGATGTTTGCAAGATCAGTTGTGCTGGACCCCAGGTATTTTATTTTATTAAAGTTATTACTTTTCATTTTTAAGTATTGGTGTCATGTGTAAATGGATGCACTGTACTAAAATATTGTCGGAATATGCTCCGTACAGTGTAGAAGGCCAAAATAATATGCAGCTACATTAAGTGTATATCCATAAGAACACAGGAGAATACTTGTCAATAACAGATGTACCATACCCAAATGTTATTTATAATATTCACTTTCATACTATGTAGAACCTAGTAGGACAACTACCTTGTACATGTATCACCTATTCTGCAGTATATGATTACTGGCTCAGTGATGCGAGTCAGGTGAACTTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15440
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362 Nonsense 331 478 7 15
ENSDART00000074789 Nonsense 669 1074 12 20
ENSDART00000129415 Nonsense 652 1057 13 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42752597)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40533862
GRCz11 5 41134015
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGCTCAGGCGCTAYGAAGAAGATATGTATTGGCGGCGCATGGAGGAAGAA[C/T]AGCACCACTGGGAGGACAGGCGAAGAATGCCYGATGGAGGGTATCCACAA
Long Flanking Sequence:
GTGGAAACAATGAAATATGTTTTTGTTTTTCAGGTTAGGAATGATGAAGGCAAGGTTATCCGGTTCCACTGCAAACTGTGTGAATGCAGTTTCAATGATCCCAATGCCAAGGAAATGCATTTGAAAGGAAGGAGACACCGACTGCAGTACAAGGTTAGTGAGTCAACAGTTCGGCTTCTGTTTTTCTTATTATGACTATAACTTCAGTGTCGCTGATTGTATATTCCACTGTTGTAGAAAAAGGTTAACCCAGATCTCCAGGTGGAAGTGAAACCAAGCATCCGTGCCAGGAAAATTCAAGAGGAAAAAATGAGGAAGCAGATGCAAAAGGAAGAATACTGGAGAAGACGCGAAGAAGAGGAGCGCTGGAGGATGGAGATGAGGTGTGACACTTGTTTCCTTGTATGAAATAAAGAGCATTTTGTGAGGCTTCCTAATTATTACTTTGTTTGCTCAGGCGCTATGAAGAAGATATGTATTGGCGGCGCATGGAGGAAGAA[C/T]AGCACCACTGGGAGGACAGGCGAAGAATGCCTGATGGAGGGTATCCACAAGGTCCCCCTGGACCTCCTGGCCTACTTGGTGTGAGGCCTGGGATGCCCATTCCACAACCACAAGGACCAGTGGTAAGACATGACAACTTGAGTCCAGTACGGTTTCCATCATTCGTCATTTGAAGACGATGCTTTCTCCTAAGCTTTCCACTTAAATGTCTTCATACATTATACTAGATTCGTCAAAACTGTAGTTTAACATCTAGTTTTTGATGCAGCCACCACGTCGTCCTGATTCCTCAGACGATCGGTATGTGATGACCAAACATGCAGCTATTTACCCCTCTGAGGATGAGCTCCAGGCCATCCAGAAGATCGTATCAATCACCGAGCGAGCACTTAAGCTTGTGTCTGACATCATCACTGACCAAGATGCTGGTGCAAGTGCAAAGGGCAAAGAAGAGGACAAGGAAAAGAAAGAGCCTCCCAAAGACAGGTGGGAAGAGAGCA
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa26539
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362 Nonsense 351 478 7 15
ENSDART00000074789 Nonsense 689 1074 12 20
ENSDART00000129415 Nonsense 672 1057 13 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42752537)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40533802
GRCz11 5 41133955
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGGAGGACAGGCGAAGAATGCCTGATGGAGGGTATCCACAAGGTCCCCCT[G/T]GACCTCCTGGCCTACTTGGTGTGAGGCCTGGGATGCCCATTCCACAACCA
Long Flanking Sequence:
CGGTTCCACTGCAAACTGTGTGAATGCAGTTTCAATGATCCCAATGCCAAGGAAATGCATTTGAAAGGAAGGAGACACCGACTGCAGTACAAGGTTAGTGAGTCAACAGTTCGGCTTCTGTTTTTCTTATTATGACTATAACTTCAGTGTCGCTGATTGTATATTCCACTGTTGTAGAAAAAGGTTAACCCAGATCTCCAGGTGGAAGTGAAACCAAGCATCCGTGCCAGGAAAATTCAAGAGGAAAAAATGAGGAAGCAGATGCAAAAGGAAGAATACTGGAGAAGACGCGAAGAAGAGGAGCGCTGGAGGATGGAGATGAGGTGTGACACTTGTTTCCTTGTATGAAATAAAGAGCATTTTGTGAGGCTTCCTAATTATTACTTTGTTTGCTCAGGCGCTATGAAGAAGATATGTATTGGCGGCGCATGGAGGAAGAACAGCACCACTGGGAGGACAGGCGAAGAATGCCTGATGGAGGGTATCCACAAGGTCCCCCT[G/T]GACCTCCTGGCCTACTTGGTGTGAGGCCTGGGATGCCCATTCCACAACCACAAGGACCAGTGGTAAGACATGACAACTTGAGTCCAGTACGGTTTCCATCATTCGTCATTTGAAGACGATGCTTTCTCCTAAGCTTTCCACTTAAATGTCTTCATACATTATACTAGATTCGTCAAAACTGTAGTTTAACATCTAGTTTTTGATGCAGCCACCACGTCGTCCTGATTCCTCAGACGATCGGTATGTGATGACCAAACATGCAGCTATTTACCCCTCTGAGGATGAGCTCCAGGCCATCCAGAAGATCGTATCAATCACCGAGCGAGCACTTAAGCTTGTGTCTGACATCATCACTGACCAAGATGCTGGTGCAAGTGCAAAGGGCAAAGAAGAGGACAAGGAAAAGAAAGAGCCTCCCAAAGACAGGTGGGAAGAGAGCACTCTTAATAGTTTTCAAAGCAGAGAAAGCTAAAGGCTGCAGCTATACATGTCCTCTTGTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40524
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026362 Essential Splice Site None 478 None 15
ENSDART00000074789 Essential Splice Site 1014 1074 None 20
ENSDART00000129415 Essential Splice Site 997 1057 None 21

The following transcripts of ENSDARG00000027109 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 42745643)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 40526908
GRCz11 5 41127061
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCATTCATGGAAGAGCAACAGAGAGAGGACATTACGTCAAGCGCTCAGG[T/A]AAAATAACTTTTGTCAGTCAAATAAAAGACTCTTTATTTCATTCAAGGGT
Long Flanking Sequence:
TTAGGAATTCTTGTTTTTTTGCACTCTGTCTCCTTTTATAACCTTTGGTGTGGTTTAGCAATGGTTTTCAAATTACAAGCAACTAAATTAAATGGTGTTAAATTAAATTCAAGGCTATGGAGCTACTGGTGGAGAAGGCCATCAGCAGTGCCTCTGGACCAATGAGCCCTGGAGATGCTCTGCGAAGAGTCTTTGAATGTATTTCCTCAGGCATCCTGCTATCAGGTAAGATCTGAATGTATTGATGCAATTCCCCCCTAAAACATGGCTAAGAGACATTGAAAATGCAAATGTTTTTAATGACATGGATTAGTAGGAGAGTTGGTCAAACTCTACACAAACTCTACTTTTTTATTTGGATGCTTAGTTCAGTATATGCTCGACTTTTCCTTGTAATGCAGGTGCTCCAGGATTGATTGACCCCTGTGAGAAGAATCCAACAGATACACTAGCATTCATGGAAGAGCAACAGAGAGAGGACATTACGTCAAGCGCTCAGG[T/A]AAAATAACTTTTGTCAGTCAAATAAAAGACTCTTTATTTCATTCAAGGGTACATTTTATACTTTTAAGTTTGGTTCACTTATAGTTCAATTCCAGTGAAAGGTATGGTTCGGTTTAATAACCATGGTTCGCTAATCCATGTATTCTGTTATTTCCATAACCATAAACCTACTAACTTGAGGTATGTTTGCTCAAACCACTTTTGGCAGTAACATAAGTATGTTATCCATAAACGCAATTGAATTTCTCAACCGATTACTTTAACCAGAGGTAACAATGGAAAGCAAAACCCAAAAAGCAGATTGCCACACCTTTCTCCTTCTATTTAAGGGCGAGTTACATTCTTTAAGCTAATCGACCAACCCCACCCCCACTCTATTTGTGTGCGTGCGTATAGTGTTATTTTTTATATATATATATATATATATAAATATATATATATATATATATATATATATTTATATATATATATATATATATATATATATATATATATTTATA
Associated Phenotype:
Not determined