ZMP
stau2
Ensembl ID:
ZFIN ID:
Description:
Double-stranded RNA-binding protein Staufen homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7ZW47]
Mouse Orthologue:
Stau2
Mouse Description:
staufen (RNA binding protein) homolog 2 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:1352508]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa113 | Nonsense | Confirmed mutation in F2 line | Not yet available |
sa24458 | Nonsense | Available for shipment | Available now |
sa44106 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa113
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028832 | Nonsense | 209 | 653 | 6 | 15 |
ENSDART00000122903 | Nonsense | 234 | 678 | 5 | 14 |
ENSDART00000142457 | Nonsense | 234 | 678 | 6 | 15 |
The following transcripts of ENSDARG00000026801 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 24 (position 12980373)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 24 | 12931821 |
GRCz11 | 24 | 13076240 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATTTTACGTGCAGCTGACAGTGGGGAACAACGAGTTTATCGGAGAGGGA[C/T]GAACTCGCCAAGCTGCCCGACACAATGCAGCCATGAAAGCCCTCCAGGCC
Long Flanking Sequence:
TGAAAATTGTATATAAATAATATAAATATATCAAGTTTATACAGGAACTAGTTGTTATAATAACTGAAACTCCTTTTTTTTTTTTTTTTACAGTGCTAATATTTTACATTCCCTTTATTTAACTTGATAGCATAGAATGGGCAGGAAAATCTACTTGGATTTTTGCATTGCTTCTTCCTTTTATCAAAGATTGTGCTTTTACACCTGCTATTCTTCCAAATGAGTTAGCAGCATGTTCAGTTTAGCTCTTGATAATTCCCGGTTGTGTTTATTGTTTCCATTCTAGAGCTCGCTTGGTAATAAAACTGCCAAGTTTCGATAAGATAATCCTCTTATAAATCAAAGGGCTTTTCCCCCCCTTTTACCTGCCTTTTTCTGTTTCACTCAACCTTTCGTTCTCTGTGTTTTGGCTCTTTCCCAAACGTAGGTACCATTACCCAGTGCCTAAGGTATTTTACGTGCAGCTGACAGTGGGGAACAACGAGTTTATCGGAGAGGGA[C/T]GAACTCGCCAAGCTGCCCGACACAATGCAGCCATGAAAGCCCTCCAGGCCCTGAAGAACGAACCCATTCCAGAGAGACCACCTCAGGTAACCTTTACTACTGGCCTGCTAACAGAACACACACCACCAACTTGATTTCACATTATATCTTACATTCACTACTTGGCAGATGCTTGAGGACTGCAGGATTGCTATTTTTGTTATTTATAATGAACGTATAGTGAAAAATAATGTGTATATAAAAAAGTGAGCTTGGTTTGTTTCTGATAGATGCCAAGGAGTTTGGTTATTATTTTTATTTAGTTTGAATTAAAACTAAAATAACTGAAACAAGTATAAACATTAAAACTATATAGCCATGTTAATAAAATTACTGACATTTTTACAAATTAAAATGAAAACAAAATACTTGTATCTTAAATTAAAGGCCGATACCACATACAGATACCACTCAAACAGTACTTCACTATATGGATGTGATGTGTTGTCCTACCTGACTTC
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa24458
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028832 | Nonsense | 384 | 653 | 9 | 15 |
ENSDART00000122903 | Nonsense | 409 | 678 | 8 | 14 |
ENSDART00000142457 | Nonsense | 409 | 678 | 9 | 15 |
The following transcripts of ENSDARG00000026801 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 24 (position 13009335)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 24 | 12960783 |
GRCz11 | 24 | 13105202 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGAGAAGGAGCCTGAATACATGCTGCTTTCAGAGAGAGGGATGCCTCGT[C/T]GAAGAGAATTCATCATGCAGGTAAGATTAATAAGAAAGCGAATCAAAAAG
Long Flanking Sequence:
AGTTGTTTTAATAAATAAAAACTGTATGCTTAAAGTTTCATATGTTGTCTTGTACAGAAAATGGAAAGCTGTAGATGTTCAGAACAACATGAAGGCCAGTAAATGATGTCTGAATATTAATTATTTGTGTGAACTGCCTTAATAATTTTAGTCGGTTCTCTTTTGTAAATTCAAGACCATTTGAAAGCATTTTATGTAACGCAGACTGTTTGTTTCTTCACTCAGTCAGTCACTCATTCACACACACTCATTCACTCTTTTGTCATTCTTTTGACAGAGTTACCGACATGAACATTAACCAGCCGTCCATCCGTCCGCCTGCTGCTTTATCAGTCTCTCATCCTCGTTCTCATTTTCTTTTTCATTCTCCTTTTCTCTATCAGACAGGACCAGAGTACGGACAGGGCATGAACCCTATTAGCAGACTGGCTCAGATCCAACAGGCCAAAAAGGAGAAGGAGCCTGAATACATGCTGCTTTCAGAGAGAGGGATGCCTCGT[C/T]GAAGAGAATTCATCATGCAGGTAAGATTAATAAGAAAGCGAATCAAAAAGTATAAAGCAAAAGAAAAAAAACTGAGGCCAAGAAGGGGGAGTGAAGGACAGATGAGTCCTGCACAAACACTGATAACCTCCCACTGTGCAATCCGTCTTAATCAGAAAGACTGTCACCTCCTCCGGCTCTGATTACCACTGACCTTCAGCTTTGTCAAAGTCAGCCAGAGATTTTTTTAACACACAAACACACAGACAGTTGCAAAGTCATTCATAAAAATGTATAAGTCTTAATGCATATGCTTAAGTTCCTAACATATACCCCTGAAAGACCCAAATTTATAAAAACAAAAAAAGCTAAGCAAAAAACAAAAAAACTTTTAGATGTTATTAAAGGCATTTAATGAAGTTATAATTTTAGCCTTTGGAGTAGCTGAAATACATTGATTCTAATTGCTGTCTGAACAAAAGTAACAGCATCTAGTTTTTTTTTTAAACAGGTGGTACTGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44106
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028832 | Essential Splice Site | 555 | 653 | 12 | 15 |
ENSDART00000122903 | Essential Splice Site | 580 | 678 | 11 | 14 |
ENSDART00000142457 | Essential Splice Site | 580 | 678 | 12 | 15 |
The following transcripts of ENSDARG00000026801 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 24 (position 13042305)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 24 | 12993753 |
GRCz11 | 24 | 13138172 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCAGCCTTCCCAACAGCTGGAGTACTTGGCTCACATTCAAGGTTTCCAG[G/C]TACAGAATAAATGAAGTGATTTTGCATATTTGTTTACCTCTCTCTTTCTC
Long Flanking Sequence:
TATATATATATATATATATGTTTTTATTGTATTGCTATTATTGAAAACCATGTTCCATTTTCTGTTTCTTTGATGAATGAAATAAATTAAATAAGAATATATAATAAATAGAATAAGAATTTTTATAAATATAATATACGTATCAGAAGTTGATGAAAATAATGAATGATAATATGCATGACTTTTTTATTGTAGCACAAAAAGGAATTCTTCACCTTTCCCCGGACGTGTATCAAGAAATGGAAGCAAGTCGCAACAAAGGAGTCCCCGGTGCTCCTGGAAACTTCCCAACAGCCAAAGAGATTGGCCAAGGGTCAGCAGGGCCATTCTGCACCCCATCGGTGGGCAACACTGCAACCATCGCGAAGGAGCTGCTGCTGAGCGGGACGTCACCCACCGCTGAAGCCCTCGTCCTAAAGGGAAAAGCACCTGCTTTGGCCTGTGGCTCCATCCAGCCTTCCCAACAGCTGGAGTACTTGGCTCACATTCAAGGTTTCCAG[G/C]TACAGAATAAATGAAGTGATTTTGCATATTTGTTTACCTCTCTCTTTCTCACTGTCCACTGTTAGGTCTGCCAAATTTCATAACATCATCTGCTTGGCTTGTGCTGTCCATCCATCTGGACGAAACTAAGGAAATGTGGAAGTGCTTGCTTTTGTCATTGCTATTCCTGCAGGCCAGGGAAGTCATTTTTCGCTGTAATATTTCCCTTTTCCTCTCTGTATACCATTACAGGCAGAGGATAACAACCTGTTTTTAGATGATTCATCTTCCACAGCCCTGTTTCTCCTTGGGCCACAAAATATTATCAAATTATTAAATATTAGTGTCATATGATTCTTAAAATGTATTTTAAAATGCTGATTTGGTTATTAAAAAGCATTTTGTAGTGTTTTTTGTTTTTCTGTCTTTTTTCATAATTGGACAAATATAACTTTTTAAAGAGCATTTTGTGTATTTGGAATGGTTTTTGTCTTGCATAAAAGCAGTCTTTTTTGATAAGT
Associated Phenotype:
Not determined