ZMP
rab5c
Ensembl ID:
ZFIN ID:
Description:
ras-related protein Rab-5C [Source:RefSeq peptide;Acc:NP_958909]
Human Orthologue:
RAB5C
Human Description:
RAB5C, member RAS oncogene family [Source:HGNC Symbol;Acc:9785]
Mouse Orthologue:
Rab5c
Mouse Description:
RAB5C, member RAS oncogene family Gene [Source:MGI Symbol;Acc:MGI:105306]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa44559 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa44559
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000034536 | Essential Splice Site | 148 | 221 | 4 | 6 |
Genomic Location (Zv9):
Chromosome 3 (position 17291219)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 17497552 |
| GRCz11 | 3 | 17647352 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCAGGCAACAAAGCAGATCTGGCCAACAAGAGAGCCGTTGACTTTCAGG[T/C]AAACTTTTAAAACCAAACCGACCTGTATGGCTTCTAAAATTATTATTATT
Long Flanking Sequence:
CACAGTCCAAAGACGAGGTGTATAGGTGAATTGGGTGGGCTAAATTGTCTGTAGTGTATGTGTGTGAATGAGTTTCCCAGTGATGGATTGCAGCTGGAAGGGCATCTGCTGTGGAAAACATATGCTGAATAATTTGGCGGTTCAATCCGCTGTGGCGACCCCAGATAAATAAAGGAATTAAGCCAAAAAGAAAATGAATGAATGAATAAAATTAAATGAAAATAAATTACTTTATTTTCATGATTATTTGATTGAATAGAAAGTTTGAAGGAAATCATTTCTTTAACTAGAAATTTATTGTATAATTACAGTGTATATAATAATATATTTCGAAATTCTTAACTTTTTATTCATTATCTTTTCCCCTCTCTTTCAGGACACATTTACTAGAGCAAAGAACTGGGTGAAGGAGCTGCAGCGCCAGGCCAGTCCAAATATCGTTATTGCTCTGGCAGGCAACAAAGCAGATCTGGCCAACAAGAGAGCCGTTGACTTTCAGG[T/C]AAACTTTTAAAACCAAACCGACCTGTATGGCTTCTAAAATTATTATTATTATTATTATTATTATTATTATATGGTTTCCAAAAATTTTTAAAGTCTTAAAACATCGTAAATTTTAACTTACTTACTTATTAGGCCTTAAAAGTTCTACATTTACTGAAAAAAATGTCTCATAGGACTTAAATCCTTTTAAACAAGTCTTAATTTGTATTTGTTCATGTCTCCAATTACCAACAATCCATCTGTAAAATTAACCCAAACTCTATTTACCAATATGTTTATTTTTTTCAATGTCAAAAAATGTTAAAAAAAGTGCATGCATACAACTAGGCTTTGCTTGTTTTAACACATTATTTAAAATATGTGGCAAAGAAATAACTAATTACCGAAAAACCAAAAACCTCTTATCTGCATTATCAACTGGCCTATTAGAAAAATATCTTAGTGTTTAGTTCTGTATAAGTCTGAAATTGCATTCATAAAGGTCTAAAAGGGCTTAAATT
Associated Phenotype:
Not determined