ZMP
rfx4
Ensembl ID:
ZFIN ID:
Description:
Transcription factor RFX4 [Source:UniProtKB/Swiss-Prot;Acc:A2BGA0]
Human Orthologue:
RFX4
Human Description:
regulatory factor X, 4 (influences HLA class II expression) [Source:HGNC Symbol;Acc:9985]
Mouse Orthologue:
Rfx4
Mouse Description:
regulatory factor X, 4 (influences HLA class II expression) Gene [Source:MGI Symbol;Acc:MGI:1918387]
Alleles
There is 1 allele of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa36604 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa36604
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000031752 | Nonsense | 675 | 735 | 18 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 14921075)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 15366493 |
GRCz11 | 18 | 15335005 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGTGTCTAATGAGCGGCTCTCCTCTCCTACACTCCAGTCCAGTGACCCCT[C/T]GATGGCCCGATGTGCCCTCTGCCAACAGCTGTTACTCCAGTCCCACCGTC
Long Flanking Sequence:
CATAAATAATGAAAATAAATTGTGATGTTACTACGGTAACACCTACTGCTACTACTAAGGATGTTGATAATAACTGCTACTTCTACTATTAAGTTATGCATGTGAATGTTTTATTATTTGTTATTTAAGTTGTTATTATAAGTGATTAAACTCACTTTTTTAGTTAATATGATAATAAATAAAATCTATAATATTGCATAATTCCTAAGAAATGCAATATACTAAAATACAGAGAGCCTATTCATTGATTTATAAGGGTACTCTACTTCATACACATTGCTTCATTCACACAAACACGGCTCATAGTGGATGATTTATTTACAAACTGCACAACATGAGCCTCGTCTGATTTATGAATGCTGGTCCTTACTTGTCTCTCTTTGTCTGTGTGTGTGTGTGTGTGTGTGTGTTTGTAGTATCCGCTCAACAGTCAGATGTCCAGAATGGAGTCGTGTCTAATGAGCGGCTCTCCTCTCCTACACTCCAGTCCAGTGACCCCT[C/T]GATGGCCCGATGTGCCCTCTGCCAACAGCTGTTACTCCAGTCCCACCGTCCACGCATCCCGCTACTCCACCGGAGACATGTACTCGCCCCTTGCCCCACGCAGGAACTCTGAATACGAGCACGCACAACACTTTCCAGGATTCGCCTACATTAACGGGGAGGCCACGACCGGATGGGCAAAATGATAAACCAGCGGTGGTCCATATTTAACACATTACAGAGAATGTATCTGAGAATGGCAACGGTGTTTTATTGGTGTGGTCAGTGTTTACAGTGCAAAGCTGCCAATAAAAGTTGATTCGCAATCATTGTGAGAGAAAACGGGACATCCTAAAAAAACGACTGAATGATTTAAGTTATTTATAAAGTCTAAATTTGGTATACTTTTAATAAAATATACATTCTATGCACAGATTAACACAGAACGAACAGAACATGTTAAATTGCCCGTTAAATATTTTTCTCCCATATTAGAAAGAAAATGCTTAATTTGGCTTAAT
Associated Phenotype:
Not determined