ZMP

pdcd5

Ensembl ID:

ENSDARG00000026072

ZFIN ID:

ZDB-GENE-040426-980

Description:

programmed cell death protein 5 [Source:RefSeq peptide;Acc:NP_957471]

Human Orthologue:

PDCD5

Human Description:

programmed cell death 5 [Source:HGNC Symbol;Acc:8764]

Mouse Orthologue:

Pdcd5

Mouse Description:

programmed cell death 5 Gene [Source:MGI Symbol;Acc:MGI:1913538]

Alleles

There are 4 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa18058	Nonsense	Available for shipment	Available now
sa29054	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa18058

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000039495	Nonsense	6	128	1	6

Genomic Location (Zv9):

Chromosome 18 (position 30993849)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	31126794
GRCz11	18	31105126

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TTTCTCTTTGAAAGTTCGGTGTGAATTTACAGAAATGGCTGATGAAGAAT[T/A]GGAAGCTATAAGACAGCAACGTATGGCCGAACTGCAAGCAAAACATGGGG

Long Flanking Sequence:

ACATGCACAGATGAATTGTTCAGCTGACAAAAACAATATGATTTCATGTGTACTTTAACGAATGTGTAGCATTTTACAGTACATATTATGAAAATATTTTAGTTTACATACCCTCTAATAAAAAAATAAAATCTTTCTTTTCTTAAACGGTCACTCCAATCCAATAGGTGGCGGTAGTTAGGTTGTTTTCCAGTCGCATAACGCTTCAAAAGAAGAAGAGGCCTTTCTACTAGCTGCATGCTATTTTTGGAAAGAAGTTCCTAACGTTGTCCGCCATAAAAAGAAATTTTACGATTCGATCTTCATAATAATTCAAAGCTGCGGGAGCTACTATACCAAACTCTGGATTTCTGCAGTGTCAATGACGTTCGACTAATCTGTTTATAAATAACACAACCTTTATCAAACGTAGCTTCTCTCACACAGGCAGAACACACAATTCGAATCGCATTTCTCTTTGAAAGTTCGGTGTGAATTTACAGAAATGGCTGATGAAGAAT[T/A]GGAAGCTATAAGACAGCAACGTATGGCCGAACTGCAAGCAAAACATGGGGTGAGAGAAACGGAAAGAAACGACCTAAATATAACATGTATATTAAACAACACATTCCAGATCCTAATATAAACCATATCTGTGCTCGTCATTGGTACTAGTCAGCACCACCAGCTAGTGTATTTAAACCTTCTTTGATCTTTTCAAGTTTCGTGTTCGCTGTCAATTCAGTCGTAACGAGTTAAATTATGACCATAGTAACATTATTAAAAAAAAGCAATTTCTACAATGTTAAGGAATACCTTATGTATGTATGTATGTATTTGTGTGTGTGTGTGTGTGTGTGTATGTATGTATATATATATATATATATATATATATATATATATATATATATATATATGTATATGTATATGTATGTATATATATGTATATGTATGTATATGTATGTATATATATATGTATATGTATGTATATGTATGTATATATATGTATATGTATGTATATATAT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa29054

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000039495	Nonsense	58	128	4	6

Genomic Location (Zv9):

Chromosome 18 (position 30981988)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	31114933
GRCz11	18	31093265

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TAAAAATCTGCAAATGTCTTTTGAAATCCTTTTTTCTTCTGCCCTTTTAG[T/A]GAGTAATTTGGCTCTTGTGAAGCCAGATAAAGCAAAAGCTGTGGAGAATT

Long Flanking Sequence:

CACTAGTGTAAACGGGGCCTAAGGTGCTATCTCTATACCTGCTAGGTTCGTTCACTCTTGAGAGGTTAATGAGGTGAGCCATCATGTGGTCGTACAATAGCCTTTGTTATTGGTTCAATGACAGTGTTATTTAATATCTTTGTTTCAATAATATGATTTTTCGATTTAAGAAAAATCCATTTTAAGATGAAAATTTTAATTGATATGAAAAATCACCCTTCTCTATATTGATCACAAAGAAAACGAGCTCATGCTTGAACATGGACAATGGACAAGCAGCAGCTGTCACTAAATTGTTTGTTTAAGTGTTAATCTACATTTTCTACAGTGTTTCTGAGACCATTAGAATTCCATCTTTAAGCAAGCTTTTTTCCTGTTAGGTTTTCTATTTTGGTGTACTATATGCATCTGCAATGATCTTTGAAAATGAACAACTGTTGTATTTAAAAATAAAAATCTGCAAATGTCTTTTGAAATCCTTTTTTCTTCTGCCCTTTTAG[T/A]GAGTAATTTGGCTCTTGTGAAGCCAGATAAAGCAAAAGCTGTGGAGAATTACTTGATACAGATGGCTCGGTTTGGACAACTTGGAGGAAAGGTAAGAAGTTAGATGCCAAAAGGAAAGATTATGATGTGACAAACACTTAAAATACTTGGTCTCCCATACTTAGAATGTTGTACTCTGCGTTTCACCCATTCAAGTGCTCACACATGGCTTTGAGTCAAGAACACGCTCCAGAGCATTGAGCTTCTTTTTTTTTTTTTTTGCTGTGGCACCTTAGTTGGGGTTTTTTTCATTACTCCCCCACCTACTGTCTCAGTTGGTATCCAGACTCTTTCGGCTATTTAACAATTAAGTCATGACTGAACTAAAGTAAAGCCTCATACATCCCCAATGCTGTGTAGGCCATGTGTTCAACAAAAGCATGTAAAAGTTGAAAATCCCAGAACTTATCTGAAAATGTACAATTGTGGCCACTTGAGTGCACTTCTCTCAAATATCAACA

Associated Phenotype:

Not determined