ZMP

tspan9

Ensembl ID:

ENSDARG00000025299

ZFIN ID:

ZDB-GENE-060503-632

Description:

Novel protein similar to vertebrate Tetraspanin family [Source:UniProtKB/TrEMBL;Acc:Q1LXC5]

Human Orthologue:

TSPAN9

Human Description:

tetraspanin 9 [Source:HGNC Symbol;Acc:21640]

Mouse Orthologue:

Tspan9

Mouse Description:

tetraspanin 9 Gene [Source:MGI Symbol;Acc:MGI:1924558]

Alleles

There are 4 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa39192	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa23241	Nonsense	Available for shipment	Available now
sa6503	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa39192

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000040500	Essential Splice Site	7	241	2	7
ENSDART00000146692	None	None	227	None	6

Genomic Location (Zv9):

Chromosome 18 (position 10508608)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	11091854
GRCz11	18	11060572

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GGGTTATTGTCCATCTGGTATCTGTGGCACATATTGAATGTAGTTGTACA[G/T]ATGTTCCAGAACGCATCAGTATCTGATAATCTGTTCTTTCTGTCTGCAGT

Long Flanking Sequence:

AATCATTAACTGGATACCTTGCTCTATGTGAATCATTTGAATCATAAGTAATTGGCTCACTATGAGCGGCTCATTTGAATCAGTAATTCCTTAACCGGAGACTTTGCTCTATCTGGATCATTTGAATCATAAGTAATTGGCTCGCTAGGAGTGACTCATTTGAATCAGTGAGTTATTGACTCCTGAACAGTTGCATCAGATATGTTCAATTCACAAATTAAAACATTCATTCTGGAATGTGAACTGATTCAGCAGATTAACTGAAAAGATTCTGCTCCTCCTGACCATTTTACTGGTTGATAAATAAAATACTTTAAAAAATGTAGTGAAGTTCAAAAGTACAACAATTTGTTATGAATTGTAGTGAAGTAAATGTTTCCTAAAAATACTCGGATAAAGTATAGATACTCAAAAATTGTACTTGGGTAAAGTAGTGTCAGTACATTTGTTGGGTTATTGTCCATCTGGTATCTGTGGCACATATTGAATGTAGTTGTACA[G/T]ATGTTCCAGAACGCATCAGTATCTGATAATCTGTTCTTTCTGTCTGCAGTTGTGTGGCTGTGGGCTGCTGGGAGTTGGAATCTGGCTGTCTGTTTCTCAAGGCAGCTTCGCCACCTTCTCCCCCTCCTTCCCCTCTCTCTCCGCTGCCAACATGGTCATCGCCATAGGCGCCATCGTCATGGTGACGGGCTTCCTCGGTTGCCTGGGCGCCATCAAGGAAAACAAGTGCCTGCTTCTGAGCGTAAGTTTTGCCACTCCTACACACGTTTACATTCCTGAAGTGTGAAGACAAACTAATAGAACTGAATGAAACTGTATATAGCAGCATACAAATAGTCAAACTATAGTTGAAGGGGTCATGTGCTTTTTACTGGTCCTTTAGCCTCTGTTTATGCATGAAAGGTCACATCACAATATTTAAAAGGTTTATAATTTTGACTTAATGGGGTGAGGACTAGTTGAGTTTCCTTAGTAGATCTAGTTTCAGAGGTCTAATATTT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa23241

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000040500	Nonsense	40	241	2	7
ENSDART00000146692	Nonsense	26	227	1	6

Genomic Location (Zv9):

Chromosome 18 (position 10508510)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	11091756
GRCz11	18	11060474

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGTTGTGTGGCTGTGGGCTGCTGGGAGTTGGAATCTGGCTGTCTGTTTCT[C/T]AAGGCAGCTTCGCCACCTTCTCCCCCTCCTTCCCCTCTCTCTCCGCTGCC

Long Flanking Sequence:

AGACTTTGCTCTATCTGGATCATTTGAATCATAAGTAATTGGCTCGCTAGGAGTGACTCATTTGAATCAGTGAGTTATTGACTCCTGAACAGTTGCATCAGATATGTTCAATTCACAAATTAAAACATTCATTCTGGAATGTGAACTGATTCAGCAGATTAACTGAAAAGATTCTGCTCCTCCTGACCATTTTACTGGTTGATAAATAAAATACTTTAAAAAATGTAGTGAAGTTCAAAAGTACAACAATTTGTTATGAATTGTAGTGAAGTAAATGTTTCCTAAAAATACTCGGATAAAGTATAGATACTCAAAAATTGTACTTGGGTAAAGTAGTGTCAGTACATTTGTTGGGTTATTGTCCATCTGGTATCTGTGGCACATATTGAATGTAGTTGTACAGATGTTCCAGAACGCATCAGTATCTGATAATCTGTTCTTTCTGTCTGCAGTTGTGTGGCTGTGGGCTGCTGGGAGTTGGAATCTGGCTGTCTGTTTCT[C/T]AAGGCAGCTTCGCCACCTTCTCCCCCTCCTTCCCCTCTCTCTCCGCTGCCAACATGGTCATCGCCATAGGCGCCATCGTCATGGTGACGGGCTTCCTCGGTTGCCTGGGCGCCATCAAGGAAAACAAGTGCCTGCTTCTGAGCGTAAGTTTTGCCACTCCTACACACGTTTACATTCCTGAAGTGTGAAGACAAACTAATAGAACTGAATGAAACTGTATATAGCAGCATACAAATAGTCAAACTATAGTTGAAGGGGTCATGTGCTTTTTACTGGTCCTTTAGCCTCTGTTTATGCATGAAAGGTCACATCACAATATTTAAAAGGTTTATAATTTTGACTTAATGGGGTGAGGACTAGTTGAGTTTCCTTAGTAGATCTAGTTTCAGAGGTCTAATATTTACTGATATATACTGATTTTTTTTTCAAAGTTTGCAAGACAAAACAAACAAAAGACAAAGAAACATCCAAATGTGAATTAGGTGCATTTCTATCAAACT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa6503

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000040500	Essential Splice Site	219	241	7	7
ENSDART00000146692	Essential Splice Site	205	227	6	6

Genomic Location (Zv9):

Chromosome 18 (position 10464311)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	11047557
GRCz11	18	11016275

KASP Assay ID:

554-4236.1 (used for ordering genotyping assays)

KASP Sequence:

TGCATGCAGTATATGTCATGTTAACCTTTCTCCTGAATTTTGTCATTTCR[G/T]CTCCTGGGAATGGCCTTTTCCATGACACTGTTCCATCAGATCCACAGAAG

Long Flanking Sequence:

AAAAAAAACTTCATAAACAGTAAATAGTAGTAAAAAAACATTTTAAACAATAAATAGTAGTAAAAAAACATCGTAAACAGTAGATAGTAGTAAAAACATTGTAAACAGTTCACAGTAGTAAAAAACATCGGAAACAGTAAATTAGTAGTAAAAAACATTGTAAAGAGTAAATAGTAGTAAAAAAACATTAAAACAGTAAATAGTAGTAAAAAACATTGTAAACAAAGTAAATAGCTGTAGAAAGCATTGTAAACACAGTAAATAAATCATAAAACAGTTAGTAGTAAAGAAATTGTAAAACACAGTTAGAAGTGAAAAGCATCGTAGTGTAAATAGTAAAAAACATAAACAGTAAATTCTCTCTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCAAACCTATCTGTTTGCTGACCTGCATGCAGTATATGTCATGTTAACCTTTCTCCTGAATTTTGTCATTTCA[G/T]CTCCTGGGAATGGCCTTTTCCATGACACTGTTCCATCAGATCCACAGAAGCGGGAAAAAGTATGACGCCTAACGAGGCCGTTTCTCAAGGGAGGAGCCCTGGTGCATTATGGGACAAACTGTGGAGAACTCTTCCTCCCCTTGTATCTAACTCTCCCCACCGGCCAACCCAACTCGGCCAACTCTTCCCATTAATTCCCAAGCTTAAACCATCCTGTATAGACTTCAGTCAAGGGCCGTCTCCAGTCCGCTCTTTCTCCCTGCCAAAGACAGAAAAGAGCGGCTCTTTCGGCCATCATCCTCCCCTGTGAGGCTTCTGACTTGCTTCATCTCCTCTAAAACCTTTATTTTGTGCTTGAACTAACTAACGACTGCAGGATGGAGAATAATGACGACAAACTGCGTGACTTTTACTAATACCGTAAATCTTTCCACCCAGAGCGAAGACATCAGACTGGAGACTTTTTTGAAAAAGCTTATCTTCATCTCCATCGATGGTGT

Associated Phenotype:

Not determined