Busch Lab

ZMP

lbx2

Ensembl ID:
ENSDARG00000025131
ZFIN ID:
ZDB-GENE-001206-2
Description:
lady bird-like homeobox 1 homolog [Source:RefSeq peptide;Acc:NP_001007135]
Human Orthologue:
LBX1
Human Description:
ladybird homeobox 1 [Source:HGNC Symbol;Acc:16960]
Mouse Orthologue:
Lbx1
Mouse Description:
ladybird homeobox homolog 1 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:104867]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa605 Essential Splice Site F2 line generated Not yet available
hu3336 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa605
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031508 Essential Splice Site 109 257 1 2
Genomic Location (Zv9):
Chromosome 14 (position 5392662)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 5079659
GRCz11 14 5386493
KASP Assay ID:
554-0515.1 (used for ordering genotyping assays)
KASP Sequence:
GAGCAAAACATTTAAGGGTTTGGAAGTCAGCGTTATACAAGCAGCAGAAG[G/A]TAAAAAGTTCATAATTATTAACGAATTATCGCACTTGTTTTCAATGCACA
Long Flanking Sequence:
CGGGTGCCTTCCTGCATGTGACGCCTGAAGCATGGTGCTTTTGGAGAGCCTCTTCAGAGTGAGGAACAACAACGATTTTTTGTAAAGAAAGGAACAGACAAGGCTTTTGTATGTATAAACAAGTTTGAGCGAGCTAGGTGACTTCTATTCGAAATAGTTTCTTGGGACTGAGATGACCTCCAGCTCTAAAGACATGAAAGCAGGATCCGTTTTGCAGTCCAGCGGCGAGGAGAGGCGGCGGGGTCCCTTGGACCAACTCCCACCTCCGGCCAACTCCAACAAGCCTCTCACCCCGTTCAGCATTGAGGATATCTTAAACAAGCCCTCCGTTAAGAAGTCCGTCGGTAGTTTGTGCCCTCCGCGGGTGCTGGAGAAAGTAACCGGCTCGAGCGCATCTCGGAACGGGATCAGCGCCCCGTCCTCGCCGTTGTGCGCGCTGGAGGAGCTGGCGAGCAAAACATTTAAGGGTTTGGAAGTCAGCGTTATACAAGCAGCAGAAG[G/A]TAAAAAGTTCATAATTATTAACGAATTATCGCACTTGTTTTCAATGCACATATGGATTTTTAGTGACGCTTTTGGAAAATGCGAGCCATCATTTTATAAATGCATGTTTTACACGACATCGATTAAACAAAATAGCCTTTTACGAACACATACAAATGTATGTGTACTATTTCTTACTTGTTAGTCAAAAGGAGCATATTTATTTCGCTTTTAGGTAAAAAAGAAGATAACCTTAGCTTATTTATTAAATTCTTTGTCATAGCCTACATATTTTTAAACCGAATTTCAATAGCGGTTCGTAGAGTGTGATTGTCACTATTTCAGGAATTTCACCCACCGCCCTGAAAATCAAAACTTCTTAGATTCTCAAGCAAATATCCCCTCTTAAAACAAGCAATCATTTTCTCGAATTGCTATTTTTAATTCATTTTTTTTTTATGAAATGTTTTGCCTTATCCGTTAATGTCAGTAGCTAAATTACCCTTTTCTACAGAACGAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
hu3336
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031508 Nonsense 239 257 2 2
Genomic Location (Zv9):
Chromosome 14 (position 5394379)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 5081376
GRCz11 14 5388210
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCTCCCAGTCTTTCCCCAAGAGCCTTTCCACAGTCCCCATCCTCGTCC[A/T]GAGGCCAAACCACAGACGAGTTCTCAGAGGAGGACGAGGAAATCGAGGTG
Long Flanking Sequence:
TTACCAACTTATATGAAATTGTATAGATCTCTCTCTCTCACACACACACTGCCTGCATGCATTATTTCTGTCATGTGTTCCTGGAAATCAACTCTCCTTTCTTTCCATTTTAAGGTCGTGAACACATCAACGCCTTTGGCCAAAGACAGGCATCCAAAAAACGACGGAAGTCCCGCACAGCCTTCACCAACCACCAAATCTACGAGCTGGAAAAGAGGTTTTTGTACCAGAAATACCTCTCACCGGCTGACAGAGACCAGATAGCACAGCAGCTGGGGCTGACCAATGCGCAGGTCATCACCTGGTTCCAGAACCGACGGGCCAAGCTCAAGAGAGATCTGGAGGAGATGAAGGCGGACGTAGAGTCTCTCAAGAAAATCCCACCACAGGCATTGCAGAAACTGGTGTCCATGGAGGACATGGAAGACGCTCACGGTGGCTCGGGGCCCATTTCTCCCAGTCTTTCCCCAAGAGCCTTTCCACAGTCCCCATCCTCGTCC[A/T]GAGGCCAAACCACAGACGAGTTCTCAGAGGAGGACGAGGAAATCGAGGTGGACGATTAAACGCAGGCCCTTGTTTTCAGAGAAGGGCATTTTTCACGACTTTTTGCACGGAAGAACTTGAAATGCAAGGAACGTTTTCTGTCTCCCTTATTTTTAATTTATTGAAAGGACCTCTACATTCTGACGTCCAGATGGAAGACACGGTTTTAAGGAATACGCTTTCATAAGAAACACTTAGAGATAAATGGTACAGTATCAAGACTGCAAAAAGTGTATGTACATTTTAAGCTTTATTTCTCCATTTCTTTTCTCAAAGGAAACCTGTGCAATTGTTTACACCATTTATGACACACATTTATGAACGCTGTAGAAATTCTTAAGCCAAAAGTGATTTTCAATTCAGTTTTCAGCTGAGTAGAATTATATATTTATAAATAATTTCAGAACACAAGATGTCCTCAGAAACCTTTTTTTTCAGTCTTGGTTCTGCACTGTAATTTC
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
whole organism
ZFA:0001094
quality
PATO:0000001
normal
PATO:0000461