Busch Lab

ZMP

tnw

Ensembl ID:
ENSDARG00000024829
ZFIN ID:
ZDB-GENE-990415-262
Description:
tenascin W [Source:RefSeq peptide;Acc:NP_571111]
Human Orthologue:
TNN
Human Description:
tenascin N [Source:HGNC Symbol;Acc:22942]
Mouse Orthologue:
Tnn
Mouse Description:
tenascin N Gene [Source:MGI Symbol;Acc:MGI:2665790]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa1797 Missense F2 line generated Not yet available
sa19810 Essential Splice Site Available for shipment Available now
sa25854 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa39871 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa1797
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000029006 Missense 11 844 2 14
ENSDART00000077178 Missense 11 932 2 15
ENSDART00000123700 Missense 11 504 2 15
ENSDART00000125298 Missense 11 930 2 17

The following transcripts of ENSDARG00000024829 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 35277072)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 35573782
GRCz11 2 35556239
KASP Assay ID:
554-1789.1 (used for ordering genotyping assays)
KASP Sequence:
CTGCTTTCTTTCAGAAACCATGGCCGTTAGATTAAACCGGCTGAAAAGAG[G/T]CCTTTTTCTACTGGGGACGCTCTTTATGGTGTCCCAYATTGTGCTCTCAG
Long Flanking Sequence:
AAAGCAAACACATCCCAGGTGGCTCTCTCCAAATGTTCATTTTCTCTTTTATAGAACATACTGCTTTTTATGTATTAAAAGCTCTGAATGACATAATTGTCACGGAGATTACATCATTTAGTTAGAAGGATTTTCTGCTCCCAGAAGCCCTTGTGGTTGAGCATGTGCAATTAATGGTTTGGATGGAATGTGCTTGGCAAACATATGGTTTGCCCAGGTCCTGCTGTAGGATCAGACATCTCTAACTCTGGCCTTGTAAAACAGATTTCGCTCCATTAAACATAATGCGATGTCTTGCGCATTGATTTTTCGTGTGGGCAGCATGCAAATCAAGCTACTTACTGGAAGGTGAAACCGCAGACCATAAGGAAAGTTTGATATTTTGAGAAAGAAACGCTTGTAAATTCAACCACACGATCATCGTAAGATTCTCCAAGGGTTCATGTCTTTCTGCTTTCTTTCAGAAACCATGGCCGTTAGATTAAACCGGCTGAAAAGAG[G/T]CCTTTTTCTACTGGGGACGCTCTTTATGGTGTCCCATATTGTGCTCTCAGAGGAGGCGGTGAATGCAGAGAAAGAAGTCACTTTCAGCCACGTCTACAGGATTGACTCCAGTTGTAAGCAGGGTTCTCAAGTAGGTCAACTTTCCCAGGACCAGGCCTCAGAAGGACAGTTAGTCACAGTGAATGGAGAGAATGACATTGTCTTCAAGCACAGCATACGCCTCCAGCCGGCCGGTTGTGGATGTGCAGATTCGGAGGATTTCAAAGCTCTGCTGTACCGTGTAAATGGCCTGGAGGAGGAAGTCAACTACTTAAAGAGCCAGTGCGCTCAGGGCTGCTGCAAAGGAGGGGCAGGTAGTAGTCCAAACATGAAGATCGCACCTTGTCTTTGAGAAACTAAGAAATGGGGCATATACTGTATACCCAAATACGCCCCAAATTTAGTAGAGTCGAGTCAGGTTTTAGTCTAAATCTATAACTGGCATCGTAACCATCTGCTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19810
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000029006 Essential Splice Site 610 844 9 14
ENSDART00000077178 Essential Splice Site 698 932 10 15
ENSDART00000123700 Essential Splice Site None 504 10 15
ENSDART00000125298 Essential Splice Site 698 930 10 17

The following transcripts of ENSDARG00000024829 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 35237281)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 35533991
GRCz11 2 35516448
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTACAGAGGCTCAAAGAGGAGTAAAATAGTGGAGACAACATTCAGTACAG[G/A]TAGAGTTGAACAATATATCAATTGAGCATTGATATCGCAACATGTGAACG
Long Flanking Sequence:
TTTGGACAGCTTTAAATATAATTTTGGCAATAGATTTTTTAACCCTCAGATTACAGATTGTTCATATAGTTTTATTTCAAACAAATAATGTACAATCCTAACAAACCAGACATTGTTTATTATTATTATTATTATTATTATTATTAATATTATTATTATTTACATGTAATGCGTAAATCTTATTTTTCAAAAAATGGGCACTTGGTTTTGTGGTCCTGGGTCATTTGATAGATATCCATGAGTAAATGATTTATTATGAGCTAATAAAGTGTTCACTTTTTATTAATTTACGTCATTTTAAGTTTCATTTTAGCCAAAATGAGTTCTTTATACGACTGATTTTTTCTGCTTTGTTTTTTAGACTGTGGAAAAAACGTTGACTGCACGAGAGAACAGATTTGCTCTCTCAGGCCTTGAAATGGGAAAGAAGTACATTGTCACCCTTATTGCCTACAGAGGCTCAAAGAGGAGTAAAATAGTGGAGACAACATTCAGTACAG[G/A]TAGAGTTGAACAATATATCAATTGAGCATTGATATCGCAACATGTGAACGTGCAATAGGATTAGATTAAAAAATAAAGACATTATTAAATATTATTTTGTAATTATTTATACAATGATGAACATGTTATTTTACATTTGATTGTTCAATTTCTGTACTTCAGTACTGTTATAAAACCATTAATCACTCTTTATTTATTTATACATCCGTGTATTATAAATGTAATTGATTATAATTATAATAAATATAATTTATGCACAGCATAGAAAAAGACTTGGTCATCTAAGTTCATGTATATTAATGAAATATTTTCAAATAAAGCTATTCAAATCATCTGGTGAAATTATATTTATATCACAACATATATTGCAGCAAAACAACACATCACAATGTCAGATTTTTCCAATATCATGCAGCCCTAAATACAGGTAACATGCCATGTCCCTTTATTCACACGATTACAACACTCATAGTGTATCAACATACCTTATCCAAGTCTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa25854
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000029006 Essential Splice Site 694 844 None 14
ENSDART00000077178 Essential Splice Site 782 932 None 15
ENSDART00000123700 Essential Splice Site None 504 None 15
ENSDART00000125298 Essential Splice Site 780 930 None 17

The following transcripts of ENSDARG00000024829 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 35233050)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 35529760
GRCz11 2 35512217
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTGGTTCAATCTGATATAGATTTGGCCTGTTTTTCTGTTGTTGTTGAAC[A/T]GGCTTGGACAAGATCCACGAACTGACCAACACTCCAACACAGTATGAGGC
Long Flanking Sequence:
ACACCACTGGTCATTAAACGCTTCTATTTAATGATCCTTTACACAACCCTGTCTTTCACTTATAATATAACATGTATGCTCCTTCCTTTGGGTGAGAATGCTTTTGTGAATGCCATTTGCTCACCTTATCATCATGCCATTGACAATATGCCACTGAGGTAGACACATCTTGCATTATTAAGTTTAACATTGATTGTTTAATTGATCGTTAATTTAGACAGAGATAGATGTAGAAATTGACAACCCTAAAGTAACCCATCTAACAAATTATTCATTGTTTCACCCAAAGGTCTTCCAGAGAAGAAACACAGGCAAAGTAGATTTCATGAAGAAATGGAGAGACTACATGAAAGGCTTTGGGGAACTGACAGAAGAATTCTGGCTTGGTATAGGCCTATATCCAACAAAGTTCATACACTAATGAAAACTATCACTTAGCCACATCATTTACTTGGTTCAATCTGATATAGATTTGGCCTGTTTTTCTGTTGTTGTTGAAC[A/T]GGCTTGGACAAGATCCACGAACTGACCAACACTCCAACACAGTATGAGGCGCGTTTTGATCTGGGCTCAGGATCAGATCGGAAATATGCTGTCTATGATAACTTCAAAGTAGCTCCATCCAAACAGAAGTTCAAACTTACCATTGGCAGCTACAAGGGAAATGCTGGTGAGCTGGAGTTTGTGTAATCCGGTTTACCACGTCGTATGAAGCCAAGTCTTGTTATTATTAATAACACGTTCCGTGCAGGTGACGCCATGACCTACCACCAGGGGGCGCCTTTCTCCACGGTCGATTCAGACAATGACATTGCTCTTGGGAACTGTGCTTTAACCCACCAAGGTGCGTGGTGGTACAAAAACTGCCATCTGGCCAATCTCAACGGCAGATTTGGGGACAACAGACACAGCATGGTGAGTGCTGAGGAATTTGTTATGAAGCCGGTTGTGAAAATTGTGAGTTTGTGTGTAGTGAGATGTAGTGACCAGCAGAGGGAGCTCTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39871
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000029006 Essential Splice Site 748 844 12 14
ENSDART00000077178 Essential Splice Site 836 932 13 15
ENSDART00000123700 Essential Splice Site None 504 13 15
ENSDART00000125298 Essential Splice Site 834 930 15 17

The following transcripts of ENSDARG00000024829 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 35232883)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 35529593
GRCz11 2 35512050
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCCAAACAGAAGTTCAAACTTACCATTGGCAGCTACAAGGGAAATGCTG[G/A]TGAGCTGGAGTTTGTGTAATCCGGTTTACCACGTCGTATGAAGCCAAGTC
Long Flanking Sequence:
TCTTGCATTATTAAGTTTAACATTGATTGTTTAATTGATCGTTAATTTAGACAGAGATAGATGTAGAAATTGACAACCCTAAAGTAACCCATCTAACAAATTATTCATTGTTTCACCCAAAGGTCTTCCAGAGAAGAAACACAGGCAAAGTAGATTTCATGAAGAAATGGAGAGACTACATGAAAGGCTTTGGGGAACTGACAGAAGAATTCTGGCTTGGTATAGGCCTATATCCAACAAAGTTCATACACTAATGAAAACTATCACTTAGCCACATCATTTACTTGGTTCAATCTGATATAGATTTGGCCTGTTTTTCTGTTGTTGTTGAACAGGCTTGGACAAGATCCACGAACTGACCAACACTCCAACACAGTATGAGGCGCGTTTTGATCTGGGCTCAGGATCAGATCGGAAATATGCTGTCTATGATAACTTCAAAGTAGCTCCATCCAAACAGAAGTTCAAACTTACCATTGGCAGCTACAAGGGAAATGCTG[G/A]TGAGCTGGAGTTTGTGTAATCCGGTTTACCACGTCGTATGAAGCCAAGTCTTGTTATTATTAATAACACGTTCCGTGCAGGTGACGCCATGACCTACCACCAGGGGGCGCCTTTCTCCACGGTCGATTCAGACAATGACATTGCTCTTGGGAACTGTGCTTTAACCCACCAAGGTGCGTGGTGGTACAAAAACTGCCATCTGGCCAATCTCAACGGCAGATTTGGGGACAACAGACACAGCATGGTGAGTGCTGAGGAATTTGTTATGAAGCCGGTTGTGAAAATTGTGAGTTTGTGTGTAGTGAGATGTAGTGACCAGCAGAGGGAGCTCTCAATTTACAACACTGAGGGGAGGATATAAAGCCAAAGCACTTACAAGCAATTGCCCAATAATTCAGAAAAAAAGCAGTGTCCTGAATCTATCAGCTCTCATATGTTCACAAATAAGACAATACTTTCAAGTTGTTTGGAGATTTATGTTCCCATTAGAGGCCTTATTT
Associated Phenotype:
Not determined