ZMP

cdh1

Ensembl ID:

ENSDARG00000024371

ZFIN ID:

ZDB-GENE-010606-1

Description:

cadherin 1, epithelial [Source:RefSeq peptide;Acc:NP_571895]

Human Orthologues:

CDH1, CDH3

Human Descriptions:

cadherin 1, type 1, E-cadherin (epithelial) [Source:HGNC Symbol;Acc:1748]
cadherin 3, type 1, P-cadherin (placental) [Source:HGNC Symbol;Acc:1762]

Mouse Orthologues:

Cdh1, Cdh3

Mouse Descriptions:

cadherin 1 Gene [Source:MGI Symbol;Acc:MGI:88354]
cadherin 3 Gene [Source:MGI Symbol;Acc:MGI:88356]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa41032	Splice Site, Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa41032

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Splice Site, Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000097719	Splice Site, Nonsense	366	864	9	16
ENSDART00000147057	None	None	123	None	3

Genomic Location (Zv9):

Chromosome 7 (position 56222590)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	52831920
GRCz11	7	53101572

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TAATTTTATTTGATTAAAACTCTCATACTGTATATTTCTTTGCTTTAGTA[C/A]ACTGTATCTGTCCCAGAGAATCAAGTAGGGGTTGAAGTGGCCAAACTTCC

Long Flanking Sequence:

ATGACAGTCACAGCCACTGATGCAGATGATAAAGAAAACACTGACAATGCTGATATCAGTTATGTCATTATAAGCCAAGATCCACCATCTCCAAAACCTAACATGTTTGCTATCAATCCTGTAAGTGGAGGGATTTCTGTGCTGGAAAAAGGCCTGGACAGAGAGGTGAGAAATGTTTTTTTGATTAATCTCAGAGCAGTTGCTGAATTTATTCTAGCAAGTTCATTCATCTTCCTCTTTCAGCAATGGTTCAGATATACTTTGGTTATTACGGCCACTGACATGAACGGAGAGGGTTTGTCAACCACTGGCACAGCAGTTATTACTGTAACTGACAGCAATGATAACGCACCTCTGTTTGAGCAATCCTCGGTAATGTGTATTTATTCATTTACTTTTTTCATACTAATTTTATTTTTTATTTTTTAGGATTCTATAACTAAAATAATCTAATTTTATTTGATTAAAACTCTCATACTGTATATTTCTTTGCTTTAGTA[C/A]ACTGTATCTGTCCCAGAGAATCAAGTAGGGGTTGAAGTGGCCAAACTTCCAGTTACTGATGGAGATGAACCTGAATCAACAGCCTGGTCAACTAAGTATCAGATCATTGCTGGTGACAAGGGTGGGTTTTTCAATATCAGCACTGGACCCAGTCGTCTAGAGGGCATCATCACCACTGTGAAGGTACTGTGTGTTAATAGTGTCTGCCCAGGCAGTTGTTTGAGATTGCATACATATAAAAGGTGAATTACTAATATTATTATTATTTTTTTTCTTTCCCTTTTAGCCTCTGGACTATGAGAAGACCAAGCAGTACATTCTGTCTGTGATTGTTGTGAATGATGATAAATTTGTTGGTCCTTTGCCTACTTCAACTGCCACAGTCACTGTGAATGTAAAAGATGTGAACGAACCACCTGAGTTTATTCCAAAGGAGAAGTTTATTTCCAGACCTGAAAATTTACCTGTTGGTAGTAATTTGATCCCTTTTACAGCCATTG

Associated Phenotype:

Not determined