ZMP
lsm4
Ensembl ID:
ZFIN ID:
Description:
U6 snRNA-associated Sm-like protein LSm4 [Source:RefSeq peptide;Acc:NP_956990]
Human Orthologue:
LSM4
Human Description:
LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17259]
Mouse Orthologue:
Lsm4
Mouse Description:
LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:135469
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa41776 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa41776
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000037824 | Essential Splice Site | 115 | 143 | 4 | 6 |
Genomic Location (Zv9):
Chromosome 11 (position 6947674)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 6855168 |
| GRCz11 | 11 | 6865007 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGAAAGGGCAGAGGAGGTGGACCTGGAAGAGGCGGCGGACCTGGCAGAG[G/A]TCTGATGCTTTTATATTCATACAATAGATCATATCATATAATCATTCCAG
Long Flanking Sequence:
AATAATTAAGCTTTTAAGTTAATCTGCTTTTCTTTTCAGCTGGTGGAGTTAAAGAATGGCGAGACATACAACGGCCATCTGGTCAGCTGCGACAACTGGATGAATATAAACTTGAGAGAAGTTATTTGCACTTCACGGGTAAATACGACTTCATTCAGATGAAAACGTCTTTGGGAGACTATTGATTCCTTACAAAATTAAGCAAAACACTTGTTTGTTTTATTTAAACAAATCTGCAGGTTATTTATTTGTCTTGCTGAAATGTGACGGCTGTTTTTCTGCCTGCTCTGATTTGCAGGATGGAGATAAGTTTTGGAGGATGCCAGAATGCTACATAAGAGGAAGCACCATTAAATACTTGCGAATCCCTGATGAAATTATAGATATGGTGAAAGAGGAAGTGGTGTCAAAGGGCCGTGGCCGGGGTGGCATGCAGCAGAATAAGCCACAAGGAAAGGGCAGAGGAGGTGGACCTGGAAGAGGCGGCGGACCTGGCAGAG[G/A]TCTGATGCTTTTATATTCATACAATAGATCATATCATATAATCATTCCAGATATATATACAGTTGATGTCACATTTATTAGCCCTCCTTTTCCCCCAAGTTCTGTTTACTGAGAGATTTTTTTCAGGACATTTCTAAACAATAGTTTTAATAACTCATTTCTAATAACTCATTTCTTTTATCTTTGCCATGATGACAGTAAATATTATTTGATTAGATCTTTTTCAGGATGCTAGTGATCAGCTTAAACTGCCATTTAAAGGCTTGATTAGGTGAACTAGGCAGATTAGGGTAATTAATGGTAATTAATTGCTTAAGGGGGCTAATAATATGATAATAAATAATAATAAATAATGAAAATAAAATGGTAAAAAACTGCTTTCATTCTAGCTGAAATAAAACAGACTTTCTCTAGAAAAAAATATTATCAGACATACTGTGAAAATTGATTTGCTTCATTAAATGTCACTTGAGAAATCTTTGAAAAAGGATAATTAATTC
Associated Phenotype:
Not determined