ZMP
cdh7
Ensembl ID:
ZFIN ID:
Description:
cadherin-7 [Source:RefSeq peptide;Acc:NP_001070916]
Human Orthologue:
CDH7
Human Description:
cadherin 7, type 2 [Source:HGNC Symbol;Acc:1766]
Mouse Orthologue:
Cdh7
Mouse Description:
cadherin 7, type 2 Gene [Source:MGI Symbol;Acc:MGI:2442792]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa19774 | Nonsense | Available for shipment | Available now |
sa31281 | Nonsense | Available for shipment | Available now |
sa13502 | Nonsense | Available for shipment | Available now |
sa32930 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa19774
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000030547 | Nonsense | 223 | 787 | 4 | 11 |
ENSDART00000122029 | Nonsense | 223 | 787 | 4 | 13 |
ENSDART00000128466 | Nonsense | 237 | 801 | 4 | 11 |
The following transcripts of ENSDARG00000023542 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 27197213)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 27393409 |
GRCz11 | 2 | 27049043 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTGTGCGGACAGCTCTGCCCAACATGGACCGAGAAGCACGGGACCAATA[T/A]CTTCTAGTAATCCAGGCCAAAGACATGGTTGGCCAGATGGGAGGACTCTC
Long Flanking Sequence:
GTCAGAGTACAGCGGTCGGCGCGGGCCACAAAATATTGCACTGAGGGCCGCAAATGGCCCGCGGGCCGCGAGTTTGAGACCCCTGGCGTAAGGAAATAAAGATTTTTTTACTGACAGAATTTTTTAAGTCAGATTTGTATAGACATATTTTCAAACTGGAGAGGAACAAACTTTAGATCACATACAGTATATACAATATGTGTGTGTGTGTGTGTGTATACAATAAAAATTATCAAATAAAATTTATTAAATTATTGCAATTATTATAAAACAATAATATAGAGTACAATTTAAAGATCATGATCTCATAATGCTAACTAAAAAGCATAACCAAAAAACACCTTTGATTCACAAGTTATAGCCAACTCTTAATTAACATACATCATTAACGGTGCATATTTCATTAATTTTAATCAACTGCAGTTATTAAAACCTGATTTCTATGCAGGAATTGTGCGGACAGCTCTGCCCAACATGGACCGAGAAGCACGGGACCAATA[T/A]CTTCTAGTAATCCAGGCCAAAGACATGGTTGGCCAGATGGGAGGACTCTCAGGAACTACGTCGGTGACGGTCACTCTGACGGACGTTAATGACAACCCTCCCCGCTTTTCACGGAGTATGATTCTACTACCAGCTATAAAGCAGTCGCAGACCCGATCCATCATTAACGCATGCTGTCTCTCCTTTTAAATTGCAAGCAAACTATCTGAGCTGTTTAATGACTCAGGCTGATCTTGTATTATAGAGATCAAGCGCTCTGTGTAGTCGCTGCGTAATTATCAGGTAGATGATCTTCCGAATAGAACTGAACAATCTTCATTTTATAATAGAGGATTTTTTTTTTAAGATCATTGCCAGAGTTCTATTTTTAGCTGTGTGAATCTCTCCCCGCCATCAGGGAGTGTGTGAAGCTTAGACTATCCCCTTGCTTGCTATATCTATAGAGTGGCTTACCTGCTACGGAGCAGAGATACATTATTAGCTCAGACCTGGTGCTAACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31281
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000030547 | Nonsense | 280 | 787 | 5 | 11 |
ENSDART00000122029 | Nonsense | 280 | 787 | 5 | 13 |
ENSDART00000128466 | Nonsense | 294 | 801 | 5 | 11 |
The following transcripts of ENSDARG00000023542 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 27197844)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 27394040 |
GRCz11 | 2 | 27049674 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTATCAGTTTGCTGTGCCTGAATCCCTGCCTGTGGCGTCGGTGGTGGCC[A/T]AGATAAAAGCCTTGGATTCTGACATCGGACCAAATGCTGAGATGGACTAC
Long Flanking Sequence:
CAGCTATAAAGCAGTCGCAGACCCGATCCATCATTAACGCATGCTGTCTCTCCTTTTAAATTGCAAGCAAACTATCTGAGCTGTTTAATGACTCAGGCTGATCTTGTATTATAGAGATCAAGCGCTCTGTGTAGTCGCTGCGTAATTATCAGGTAGATGATCTTCCGAATAGAACTGAACAATCTTCATTTTATAATAGAGGATTTTTTTTTTAAGATCATTGCCAGAGTTCTATTTTTAGCTGTGTGAATCTCTCCCCGCCATCAGGGAGTGTGTGAAGCTTAGACTATCCCCTTGCTTGCTATATCTATAGAGTGGCTTACCTGCTACGGAGCAGAGATACATTATTAGCTCAGACCTGGTGCTAACAGCTGGGTGATAAGAAAGGAAAAAAAGAGAAATAGCATCATCAATAACCCGTGTGTGTTTGCCGGGCCTCTTTTGCAGAATCCTATCAGTTTGCTGTGCCTGAATCCCTGCCTGTGGCGTCGGTGGTGGCC[A/T]AGATAAAAGCCTTGGATTCTGACATCGGACCAAATGCTGAGATGGACTACAGAATTATAGAGGGCGACGGCCTTGGGGTGTTCAGGGTCACAACAGACAAAGATACCCAGGAAGGAGTCATAACTCTGCAGAAGGTAGGCCAGAGACAGCCTGAACCTTATATGTACTTTCAGCCTCATTGCTATGACTGCAAATAAGCGAAGGCGATAAATTTTTCATGCCTGCGAAGGGAGCGCGATAAGAAAATGTGGTAGATGTGAAATGCGTGTATCTTCTGATGCTGTCAGAGGTTGATCTAACAACCACTGGGATCATCTCAAATATGAGACAGCTTTGAGGTTTTGACAAAGTTAAAGCACGTACTGTAAGAATTCGATGTTAACAAGTCCTAATGGTTAGTGTACTCTGCTCTTACATCCATAGTTATGAAGCGCTGTTATCGACTGGTCGTGACCCTTATAACAACCTCCAGCCCACCTGCACTTGACCTCTGACATTTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13502
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000030547 | Nonsense | 605 | 787 | 10 | 11 |
ENSDART00000122029 | Nonsense | 605 | 787 | 10 | 13 |
ENSDART00000128466 | Nonsense | 619 | 801 | 10 | 11 |
The following transcripts of ENSDARG00000023542 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 27224241)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 27420437 |
GRCz11 | 2 | 27076071 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCCAGTCGTGTGGCACAGAGGCCTTCATGCTGTCAGCAGGACTCAGCACC[G/T]GAGCAYTCATCGCCATCCTTGCCTGCATCATCACCCTGCTTGGTAGGAAA
Long Flanking Sequence:
GTATTCATCTTGCTGTTCTTTACTCCCTCTTGGACGCTGTCTTAGGTCATTGAAACCATAAGTGCTGTGGATAAAGATGAACCACCCAGCGGGCACCGCTTCTTCTTCTCCCTCACCGCAGAGACAGCTGGGAACATGAACTTCACTCTCCGAGACAATAAAGGTATGCAATTTCATTGAGACAGTTTATAGTATCCTTGAAACTCAGCTCCTGTTCTTGTTCATGAAAAAGCTATTCATAATAATTTTTCCTTCTTTTTTTTTACATGATCCTCATCTTTCTGTCTGCAGACAATACTGCTTCTGTTCTGACGAAGCGGAGTGGTTTTCAGAGGAGGGATCAGTCTATGTATCGACTGCCGGTGTTGATAGTGGACAGCGGGACTCCTGCCCTCAGCAGCACTAACACGCTGTCTATTAGAGTGTGTGACTGCGACCCTGATGGGACGCCCCAGTCGTGTGGCACAGAGGCCTTCATGCTGTCAGCAGGACTCAGCACC[G/T]GAGCACTCATCGCCATCCTTGCCTGCATCATCACCCTGCTTGGTAGGAAAAACATACCTTTAAACTTCTTGAGCACATACACAAAAATGTCAGGATAGAAATATAATTTTCCTATTTTCTTATAATTGGCCTTGTAATTGATTTTGGGGAAATTTTTTTTATTATTATTATTTTATTATTATTATTATTATTATTTTATTATTATTATTATTAGTCCCTTTATTAATCCGGGGTCGCCACAGCGGAATTAACCGCCATATGATGATGATGATGATGATTATGATTATTATTATTATTTTTTTATTATTATTATTATTATTATTATTAATAATAATAATAATAATAATTAAAACGTATTATATAATTAGCTTTTTAATTGTATCTGAGTTGCCTTTTATGTTTAATTGTTTTTATTTATATATCAACACATTTTGTCAGGGATTTAAATTTAACTAATTGCTTAATTATTTACATTCATTCATTTAACAGACGCATTTATC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32930
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000030547 | Nonsense | 712 | 787 | 11 | 11 |
ENSDART00000122029 | Nonsense | 712 | 787 | 13 | 13 |
ENSDART00000128466 | Nonsense | 726 | 801 | 11 | 11 |
The following transcripts of ENSDARG00000023542 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 27242594)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 27438790 |
GRCz11 | 2 | 27094424 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCCCCTTACAAAATCACCCCAGACAACGGGATCTTCAGGGAGTTTATAT[G/A]GGACCGCCTGAAGGACGCTGACGTGGATCCTTCCGCACCGCCTTACGACT
Long Flanking Sequence:
TCTCATAATTTTAAAGTTTAAAGTTACAAGATACAGAGTTTGATATATTTATGGAAACCATTTTGCATTTGTTCATTATTTATTTAAAACAGACATCCTGTTGAGATTATAAATGTATTTACTGTTTGTTTGTCTCCTGTTTAATAAAAAGTATGAACTTTAAAAAAAAAAAGTTTTGCTCATCCTAGCACCATATGTTTCTTCTGTCTTGTTATTTGCAGTTCTGGTGCTGCTGATCGTGACAATGAGGAGGAGGAAGAAGGAACCTCTGATCCTGGATGAAGACCGGGACGTGCGGGAGAACATTGTGCGCTACGACGACGAAGGCGGGGGCGAGGAAGACACAGAGGCCTTTGACATGGTGGCTCTGCGAAATCTCAATGTAGTGCGGGACAGCAAAGCCCGACGAGACGTCACCCCAGAGGTGCCTACCCTTTACTGCTCCCGGCCTCCCCCTTACAAAATCACCCCAGACAACGGGATCTTCAGGGAGTTTATAT[G/A]GGACCGCCTGAAGGACGCTGACGTGGATCCTTCCGCACCGCCTTACGACTCCCTGCAGACGTACGCTTTCGAGGGCAGCGGCTCGGTGGCCGAGTCCCTCAGCTCCCTGGACTCCCTGAGCACAGACTCAGAGCAGAACTATGACTATTTGAGCGACTGGGGGCCTCGATTCAGGAAGCTAGCTGACCTGTACGGCCACGGAGACAGCAGCAATATATTCTCCTCCTAGCTGGGATTACAATTCTGCCAAGGTCTGCTCAATCAAGGACATAATGGAAATGAACAATGATCAAGAGAATACCACTGACTCACTGATGCTTGACAGAAGAGGGGAGCAAAAAAAAAAAAAGGGAACATTAAATGCACATAGTATGGGAGATATATCTGCAGAGAGCAGCAGTTTTGATAAAGAATAGACGGAGGAGATCGGAGTCAGAAGCACTTCTATTTAAATTGCAGTTAGACGCCAAGTGTGGACTTGTGTGGGGTGTGGTTTTAAG
Associated Phenotype:
Not determined