Busch Lab

ZMP

cdh7

Ensembl ID:
ENSDARG00000023542
ZFIN ID:
ZDB-GENE-061019-3
Description:
cadherin-7 [Source:RefSeq peptide;Acc:NP_001070916]
Human Orthologue:
CDH7
Human Description:
cadherin 7, type 2 [Source:HGNC Symbol;Acc:1766]
Mouse Orthologue:
Cdh7
Mouse Description:
cadherin 7, type 2 Gene [Source:MGI Symbol;Acc:MGI:2442792]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa19774 Nonsense Available for shipment Available now
sa31281 Nonsense Available for shipment Available now
sa13502 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa19774
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000030547 Nonsense 223 787 4 11
ENSDART00000122029 Nonsense 223 787 4 13
ENSDART00000128466 Nonsense 237 801 4 11

The following transcripts of ENSDARG00000023542 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 27197213)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 27393409
GRCz11 2 27049043
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTGTGCGGACAGCTCTGCCCAACATGGACCGAGAAGCACGGGACCAATA[T/A]CTTCTAGTAATCCAGGCCAAAGACATGGTTGGCCAGATGGGAGGACTCTC
Long Flanking Sequence:
GTCAGAGTACAGCGGTCGGCGCGGGCCACAAAATATTGCACTGAGGGCCGCAAATGGCCCGCGGGCCGCGAGTTTGAGACCCCTGGCGTAAGGAAATAAAGATTTTTTTACTGACAGAATTTTTTAAGTCAGATTTGTATAGACATATTTTCAAACTGGAGAGGAACAAACTTTAGATCACATACAGTATATACAATATGTGTGTGTGTGTGTGTGTATACAATAAAAATTATCAAATAAAATTTATTAAATTATTGCAATTATTATAAAACAATAATATAGAGTACAATTTAAAGATCATGATCTCATAATGCTAACTAAAAAGCATAACCAAAAAACACCTTTGATTCACAAGTTATAGCCAACTCTTAATTAACATACATCATTAACGGTGCATATTTCATTAATTTTAATCAACTGCAGTTATTAAAACCTGATTTCTATGCAGGAATTGTGCGGACAGCTCTGCCCAACATGGACCGAGAAGCACGGGACCAATA[T/A]CTTCTAGTAATCCAGGCCAAAGACATGGTTGGCCAGATGGGAGGACTCTCAGGAACTACGTCGGTGACGGTCACTCTGACGGACGTTAATGACAACCCTCCCCGCTTTTCACGGAGTATGATTCTACTACCAGCTATAAAGCAGTCGCAGACCCGATCCATCATTAACGCATGCTGTCTCTCCTTTTAAATTGCAAGCAAACTATCTGAGCTGTTTAATGACTCAGGCTGATCTTGTATTATAGAGATCAAGCGCTCTGTGTAGTCGCTGCGTAATTATCAGGTAGATGATCTTCCGAATAGAACTGAACAATCTTCATTTTATAATAGAGGATTTTTTTTTTAAGATCATTGCCAGAGTTCTATTTTTAGCTGTGTGAATCTCTCCCCGCCATCAGGGAGTGTGTGAAGCTTAGACTATCCCCTTGCTTGCTATATCTATAGAGTGGCTTACCTGCTACGGAGCAGAGATACATTATTAGCTCAGACCTGGTGCTAACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31281
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000030547 Nonsense 280 787 5 11
ENSDART00000122029 Nonsense 280 787 5 13
ENSDART00000128466 Nonsense 294 801 5 11

The following transcripts of ENSDARG00000023542 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 27197844)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 27394040
GRCz11 2 27049674
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTATCAGTTTGCTGTGCCTGAATCCCTGCCTGTGGCGTCGGTGGTGGCC[A/T]AGATAAAAGCCTTGGATTCTGACATCGGACCAAATGCTGAGATGGACTAC
Long Flanking Sequence:
CAGCTATAAAGCAGTCGCAGACCCGATCCATCATTAACGCATGCTGTCTCTCCTTTTAAATTGCAAGCAAACTATCTGAGCTGTTTAATGACTCAGGCTGATCTTGTATTATAGAGATCAAGCGCTCTGTGTAGTCGCTGCGTAATTATCAGGTAGATGATCTTCCGAATAGAACTGAACAATCTTCATTTTATAATAGAGGATTTTTTTTTTAAGATCATTGCCAGAGTTCTATTTTTAGCTGTGTGAATCTCTCCCCGCCATCAGGGAGTGTGTGAAGCTTAGACTATCCCCTTGCTTGCTATATCTATAGAGTGGCTTACCTGCTACGGAGCAGAGATACATTATTAGCTCAGACCTGGTGCTAACAGCTGGGTGATAAGAAAGGAAAAAAAGAGAAATAGCATCATCAATAACCCGTGTGTGTTTGCCGGGCCTCTTTTGCAGAATCCTATCAGTTTGCTGTGCCTGAATCCCTGCCTGTGGCGTCGGTGGTGGCC[A/T]AGATAAAAGCCTTGGATTCTGACATCGGACCAAATGCTGAGATGGACTACAGAATTATAGAGGGCGACGGCCTTGGGGTGTTCAGGGTCACAACAGACAAAGATACCCAGGAAGGAGTCATAACTCTGCAGAAGGTAGGCCAGAGACAGCCTGAACCTTATATGTACTTTCAGCCTCATTGCTATGACTGCAAATAAGCGAAGGCGATAAATTTTTCATGCCTGCGAAGGGAGCGCGATAAGAAAATGTGGTAGATGTGAAATGCGTGTATCTTCTGATGCTGTCAGAGGTTGATCTAACAACCACTGGGATCATCTCAAATATGAGACAGCTTTGAGGTTTTGACAAAGTTAAAGCACGTACTGTAAGAATTCGATGTTAACAAGTCCTAATGGTTAGTGTACTCTGCTCTTACATCCATAGTTATGAAGCGCTGTTATCGACTGGTCGTGACCCTTATAACAACCTCCAGCCCACCTGCACTTGACCTCTGACATTTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13502
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000030547 Nonsense 605 787 10 11
ENSDART00000122029 Nonsense 605 787 10 13
ENSDART00000128466 Nonsense 619 801 10 11

The following transcripts of ENSDARG00000023542 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 27224241)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 27420437
GRCz11 2 27076071
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCCAGTCGTGTGGCACAGAGGCCTTCATGCTGTCAGCAGGACTCAGCACC[G/T]GAGCAYTCATCGCCATCCTTGCCTGCATCATCACCCTGCTTGGTAGGAAA
Long Flanking Sequence:
GTATTCATCTTGCTGTTCTTTACTCCCTCTTGGACGCTGTCTTAGGTCATTGAAACCATAAGTGCTGTGGATAAAGATGAACCACCCAGCGGGCACCGCTTCTTCTTCTCCCTCACCGCAGAGACAGCTGGGAACATGAACTTCACTCTCCGAGACAATAAAGGTATGCAATTTCATTGAGACAGTTTATAGTATCCTTGAAACTCAGCTCCTGTTCTTGTTCATGAAAAAGCTATTCATAATAATTTTTCCTTCTTTTTTTTTACATGATCCTCATCTTTCTGTCTGCAGACAATACTGCTTCTGTTCTGACGAAGCGGAGTGGTTTTCAGAGGAGGGATCAGTCTATGTATCGACTGCCGGTGTTGATAGTGGACAGCGGGACTCCTGCCCTCAGCAGCACTAACACGCTGTCTATTAGAGTGTGTGACTGCGACCCTGATGGGACGCCCCAGTCGTGTGGCACAGAGGCCTTCATGCTGTCAGCAGGACTCAGCACC[G/T]GAGCACTCATCGCCATCCTTGCCTGCATCATCACCCTGCTTGGTAGGAAAAACATACCTTTAAACTTCTTGAGCACATACACAAAAATGTCAGGATAGAAATATAATTTTCCTATTTTCTTATAATTGGCCTTGTAATTGATTTTGGGGAAATTTTTTTTATTATTATTATTTTATTATTATTATTATTATTATTTTATTATTATTATTATTAGTCCCTTTATTAATCCGGGGTCGCCACAGCGGAATTAACCGCCATATGATGATGATGATGATGATTATGATTATTATTATTATTTTTTTATTATTATTATTATTATTATTATTAATAATAATAATAATAATAATTAAAACGTATTATATAATTAGCTTTTTAATTGTATCTGAGTTGCCTTTTATGTTTAATTGTTTTTATTTATATATCAACACATTTTGTCAGGGATTTAAATTTAACTAATTGCTTAATTATTTACATTCATTCATTTAACAGACGCATTTATC
Associated Phenotype:
Not determined