Busch Lab

ZMP

si:ch211-12e13.2

Ensembl ID:
ENSDARG00000023479
ZFIN ID:
ZDB-GENE-060526-27
Description:
Novel protein containing multiple low-density lipoprotein receptors domain class A, low-density lipo

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa20347 Essential Splice Site Available for shipment Available now
sa33533 Nonsense Mutation detected in F1 DNA Not yet available
sa16114 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa20347
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000007453 Essential Splice Site 546 1002 9 24
ENSDART00000134896 Essential Splice Site 546 1355 9 21
ENSDART00000147000 None None 201 None 4

The following transcripts of ENSDARG00000023479 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 9595707)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 8697579
GRCz11 5 9202217
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAGTCATGGTTATGTTCTGGAACCTGATGGCCACAGCTGCAAAATCACAG[G/A]TGTATATGTGCTGCAGTTCATAATGCTAATGTTTTTGTTGTTGTTGTTAA
Long Flanking Sequence:
CTGAGAAAAAAATTTAGAATCTATCTGGGAGCTTATTCCATTAACTATAAGGGATGGTGAATGAGGGCATAGGGAGCGATTTTTAATGTAGCATGGATATACTTGAAAATTTAAAGTTTAAATTTTTTTTTTATTATTTATTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATACTGTCTAGTTTGTGGCTCTGCCCCCAGTATGAATCTCTTATTGGTAATCAGCTTATCACTTACAGTTTTGTACTTTTGTTCACTCTTGCTTGTTCTCACTGAAGCGCTGCGGGTGCAGGATGGGCTATAAACCTGTGGATGATGGCCTGAGGTGTGCAGATGTGGATGAGTGTGTGGAGCGTCCAAACATCTGTTCACACCGCTGTAACAACACTCTAGGCTCTTTCCAGTGCTCCTGTAGTCATGGTTATGTTCTGGAACCTGATGGCCACAGCTGCAAAATCACAG[G/A]TGTATATGTGCTGCAGTTCATAATGCTAATGTTTTTGTTGTTGTTGTTAAACATGGACTCGATTTGAAGTAGTATGCATACTGGGCAGAAACACTTGACAGTTTATAAAGTTTGAAAGACCCTATGTTTTATACAAGTATCCTTTTAATATGTTTTGTAATTTTATATGACCCATTGCATGCTTGTTTGTTTCAATATGGAAGCTTGTTTCTTGTTTCTAAGGGTGTGCTTACTAGGTACAGTTGCCTTGAACCGTGCCGAAGCGCTGTTGTCCCCCCTCCTCTCCCCTGACGGCCAGCGCTCACATTGCATTTACCTTCCAAGACACAGCATGCTTTAGTTATATTGTCTTGTATTATTTTTAGTCATTTGATATGCTGTGACACGCAGTCAAATATTTTGCAGAACAGATCCACCACTTTTGACACAAATTATCTTAAGAGTCCTCGTGCTGCAGGTATTAGGAGGTTTGCTGAAGGTGCAGCTGTCGTGCAGTGAGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33533
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000007453 Nonsense 658 1002 11 24
ENSDART00000134896 Nonsense 658 1355 11 21
ENSDART00000147000 None None 201 None 4

The following transcripts of ENSDARG00000023479 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 9593075)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 8694947
GRCz11 5 9199585
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCAGATCAATGCTGTGAGGCTGGACAGTGAGATCGGCAGATCAACAGAT[C/T]GAGTCATGATCCTGGGAGAAGATCTGGGACAGCTGCGCTCCATCGCCCTG
Long Flanking Sequence:
TTTAAACATTAAAAAAAAAAAGTAAAATGATACAAGATACAAAAAAGTAATAAGAAACAATGTAAAAAGAGCCGTCTGTACTCAAATGCCATTTAGTCCCTTTCAAATCCACAAATGGCATTACTTAGACGCGCACAATATCATCAGTATGAAACTAAAGTTTTAAATAACGCTAAAAGGAGCAGTCTGTATTCTCAGCATCGTGCCCCTTTAAATTCACAAATATTAGTTATATGCTCAACATCATCTGTACAATGTGAAACAATTTTGATACTATGAACAACTTTGAATGTTTATCTTCTAAACTGTCACTGTTTTTAAGCACACTCGCTTTCAGATATCTTGAAAACTAACAATAACCTTACCAACATCTAAAAAAAGGTATCAGTGCAGACAGTCTTGCAGTGGACTGGGTGGCAAGGAACCTCTACTGGACTGACAGTGAAAACAGTCAGATCAATGCTGTGAGGCTGGACAGTGAGATCGGCAGATCAACAGAT[C/T]GAGTCATGATCCTGGGAGAAGATCTGGGACAGCTGCGCTCCATCGCCCTGATGCCACAGAAAGGGTTCGAAATGGCCATTCTTATGATTCCTTATTGGTTAAAGCAGTGTTTCTCAACCACCTTTCTGGAAGACCACCAGCTTTGCACATATTCCTAAGTCTCCTTAATTAAACACACCTAATTCAGATCATTGGCTTATTAGCAGAGACTAAAAGACTTGTAATGGGTGTGATGGACAAAGGAGACACCCAGTGTTGGCGGTCCTCCAGGAACATGGTTGAGAAACACTGGGCTAAAGGGATGGTTCACCCAAAAATAAAAATTCTGCTGTTATTCGCCCCCACAATCGCTGCACACCTTTTAAAAATTAAGAAATTTTAGGTGAAATGTGAGAGCTCTCTTATCCTACAATGACAGTAATAGCCCAGAGATGTTTAAAGTACAGAAAATGAACCAAAAACATTGTTTAAAAGTCGTTATGACTTCAGTGATTCAACTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16114
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000007453 Nonsense 712 1002 12 24
ENSDART00000134896 Nonsense 712 1355 12 21
ENSDART00000147000 None None 201 None 4

The following transcripts of ENSDARG00000023479 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 9591042)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 8692914
GRCz11 5 9197552
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGAATGGACGGTTCAGACAGACGTGTGCTGGTCAGTAAATCTCTGCGGTG[G/A]CCGGTCAGTCTGACCGTCGACTCSCTGCAWCAAAGGATCTACTGGACTGA
Long Flanking Sequence:
GGTGTGGGTTTGAGTAAAGTGTTTTTAAAGGTCTGATGTACATTTTCTCTGAATTTAGAACAAAAAAAATAATAATTTAGAGCTTTTCCTCACAAAATGACAATTGGTCAGAATAACTCCTGTGAAGTAAACTAACCTTAGGTCAAACAATATTGTGCTTAATTACTATAAATGTTCTCTTTTTGTTTTATTTTGACCATTAAATTTCATTTTCCATTTAGTGTTTTGACCATTTCAGTCAAAACATGCTTTAAATGTCAGAATTGTATTTCAAATAAGGAAGAACTGGAATCAGTAGTTTTATATAAAGCCAAAATCACATTTTGCACACACAACTGCTTATAATGAATCCAGGGAAACTAAGGCTTTGTTGTCATATGTTGATATTGTCCTCCTCCCAGAATAATGTTCTGGTCAGAAACTGGGGACGAGGCTCAGATTGAAAGAGCAGGAATGGACGGTTCAGACAGACGTGTGCTGGTCAGTAAATCTCTGCGGTG[G/A]CCGGTCAGTCTGACCGTCGACTCCCTGCATCAAAGGATCTACTGGACTGATGAGAAACTCAAGTGCATCGGTTCAGCTAACATTGACGGAGGAGATGTAAAGGTATCGGATGCAAGTTACTGATGCAACTTACAGATGAGGCTGTCATTCAAATAATATTAATACACAATAATTGTGGGTAACACTTTAGAACAATGGTCCATTAGTTAATGTATTTACTAACATAACCTATGTATGAATAATATTGTAAGTCATTTATTAATCATTGTTCAACATTAACCAATGCATTATTACAATCCAAAGTTGTGCTTGTTAACATTAGTTGATGAACAGTGTGGTGACAAGAACTAACGTTCTATAATATTAACAAAGTTGAATAAATACAGTAATTATTAATAAATGCATTAACTAATGGACCATTATTTTTAAGTGTTACCTAATGTTGTATTAATGTTAATGTATTTGTCGACAAACCACGAACAATACATTTATTACAATGT
Associated Phenotype:
Not determined