ZMP
apobl
Ensembl ID:
ZFIN ID:
Description:
apolipoprotein B, like [Source:RefSeq peptide;Acc:NP_001025233]
Human Orthologue:
APOB
Human Description:
apolipoprotein B (including Ag(x) antigen) [Source:HGNC Symbol;Acc:603]
Mouse Orthologue:
Apob
Mouse Description:
apolipoprotein B Gene [Source:MGI Symbol;Acc:MGI:88052]
Alleles
There are 11 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa18137 | Nonsense | Available for shipment | Available now |
sa43475 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa37070 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa12118 | Nonsense | Available for shipment | Available now |
sa43476 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa16833 | Nonsense | Available for shipment | Available now |
sa6637 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa6638 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa37071 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa10039 | Nonsense | Available for shipment | Available now |
sa32301 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa18137
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Founder:
SL4_10_E11
KASP Assay Location:
Project idt12, Plate 3, Well G02
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028709 | Nonsense | 1336 | 3730 | 23 | 27 |
ENSDART00000133353 | Nonsense | 1336 | 3730 | 23 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31302873)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 31374086 |
GRCz11 | 20 | 31276965 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTGCCATGATTGAAGTCACRGGAACAAGTCCAGTGGATCTACTCTCCTTC[A/T]AAATAGAAGGTACTTGTATGYTTTCATATTTTCTGTTAATCACNTTTTTG
Long Flanking Sequence:
TCCTGAATGCGTGAGTGATTCAGAAACAGCTAAACTAATTTTAAATGCAGAACCATTATGAATTATAAATGTTTTGTTACACATTGTACTAATTTATGACATTACATTAATTAAAAAATATTCTGTATTTTAACAGTGAGGGTGCTGCTAAATACAAGTTTGGCCAGAATTATTACACCATAACCATACCTGTTCCTCTTGGTGGAAAAACTTCAAGAGATTTCAACCTCCCTGCTGCTCTGGAAACACCAGTACTGAACGTACCACAGCTTGACCTTCAGGTTAAATCCATTAATATCCCACTTCCAGTGTTCTTTATACCAGAGAGTCTGTCTCTGTCACTACCTCTTGTGGCAAAGGCGGAGGTGTCCAGCAAGCTGAGCAGCAACTTCTATGACATGGAAGCAAAAGCTTCTGCAGGGAGTGAACTTGTAGATAAACCAACCTATTCTGCCATGATTGAAGTCACAGGAACAAGTCCAGTGGATCTACTCTCCTTC[A/T]AAATAGAAGGTACTTGTATGCTTTCATATTTTCTGTTAATCACTTTTTTGTAATCTGTAAAAAATAAATATTGAATGTTGTTCTGTTTATGTTTAGGATCAACCTTCCTGGTAGGTAGACTTGGAGAATCTTTGAAGACTGAGATGAAATCCTCCCTTAATCACAAGCTCCTTGAAGCCAGTGTCAATTATTTTGAGGAAATAACAACTGGAGAAAAAATCACAATGAAATCAAGCAGCAAGATGGAGGCGAAAAGTCCCTTTGGTCTGAAGATTTCTCTGGAACACACGGGCCAGGTTGGACTCGATGAAGATGAGATCTCTGGAGATGGAAATCTGTTGGGCTCTATCAAGGCTGGTCCTTTGAATGGTGAAGTTGCTCTCAGACAATCACTTATCCTTCTTCCATTCAAGCCAGAGCTGAAAATCGACTCTTCTCTGAAAGTAGACTTAGAACAAATCCAAGCAGAGAACATAATTGAAGCAGCTTTTGCCAATGGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43475
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Founder:
SL7_04_D4
KASP Assay Location:
Unknown
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028709 | Nonsense | 1591 | 3730 | 24 | 27 |
ENSDART00000133353 | Nonsense | 1591 | 3730 | 24 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31303726)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 31374939 |
GRCz11 | 20 | 31277818 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACATGTGCAGCCTTTCCCTGACCAGAAACGGCCTAGTCACAATTGGCT[C/A]AACCTTACTAGAGTGCCCAGACATGCCTTTGACACTGCAGAACAAATTCA
Long Flanking Sequence:
GGCTGGTCCTTTGAATGGTGAAGTTGCTCTCAGACAATCACTTATCCTTCTTCCATTCAAGCCAGAGCTGAAAATCGACTCTTCTCTGAAAGTAGACTTAGAACAAATCCAAGCAGAGAACATAATTGAAGCAGCTTTTGCCAATGGAGAGCTCTCTTTCACATCTAAATCAACAGCATTCCAGGACAATCTCATACATGTTGCTGAACTTGCCTATAAAGAATCACAGCTTGCTCTGAAGTCAGATGCAAGGGCAAAGGCTTTCGGCCTAAACATCCAAAATGTAGCTGAGGCTAGTGCTAGTTTTAATTTAGTTAACGTTAAGATTGACACTAATGTTGACACTTTGTTTGGAAATCGTGTCCGTTCCCAGTTTATAGCAGCACTGGACGCCAATGGGCTGGATGTAAAAAGTGATGCCTCTGCAAATCTGGATGAACACACAGCTTCTCACATGTGCAGCCTTTCCCTGACCAGAAACGGCCTAGTCACAATTGGCT[C/A]AACCTTACTAGAGTGCCCAGACATGCCTTTGACACTGCAGAACAAATTCAATGGAGCCCTTGACACTTCAGGGCTTTCATTGTCAGTTGAAACAAAAGGTAAATTCGTTGAAGTGACAATTGAAAACACAAATTCTCTGTCTGCCTCCCTGTCCTCAGTAGATTTCATTTCCAAAGCTAATAGCGATGATGGAACATATGTGCATGACTTCTCCCTTCAGCTTCAGCCATATAGTACCTCGTTGAAAATTAGCAATAATCTGAATGCTCTGAACATCAAACTGATTAATGAGGCACAGTTTAAGGCACTTCCATATGCAGCAGATCTGACTGGCAGTTGGAAGCTTTCCTCTGGAACAGATGAGCTTAAGAACACATATGAGATCAAATATGAAGATCTGGTTGCTACAGCCAAGTGTGGTCTCACTGGAAAACTCATGGGATCTCACATGAGCCAAAACACAGAAATTGAAGTTGCTGGACTTTCAGTTACATACGGCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37070
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Founder:
SL6_08_A12
KASP Assay Location:
Unknown
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028709 | Nonsense | 1800 | 3730 | 24 | 27 |
ENSDART00000133353 | Nonsense | 1800 | 3730 | 24 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31304352)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 31375565 |
GRCz11 | 20 | 31278444 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACGTTGATGCAATGGTCAATGCAGATGGGGATTTGTATCTGTATGGAAAA[C/T]AAAGCGCACAAGTCTACTCTAAATTCCTTATGAAGGCAGAACCACTTGCT
Long Flanking Sequence:
ACACAAATTCTCTGTCTGCCTCCCTGTCCTCAGTAGATTTCATTTCCAAAGCTAATAGCGATGATGGAACATATGTGCATGACTTCTCCCTTCAGCTTCAGCCATATAGTACCTCGTTGAAAATTAGCAATAATCTGAATGCTCTGAACATCAAACTGATTAATGAGGCACAGTTTAAGGCACTTCCATATGCAGCAGATCTGACTGGCAGTTGGAAGCTTTCCTCTGGAACAGATGAGCTTAAGAACACATATGAGATCAAATATGAAGATCTGGTTGCTACAGCCAAGTGTGGTCTCACTGGAAAACTCATGGGATCTCACATGAGCCAAAACACAGAAATTGAAGTTGCTGGACTTTCAGTTACATACGGCAGTGAATCCAATTTCAACTCACAGTATCTCCGCTTCAATAGCGACTTACATGCCGCTGCTGTTCCCTTCAGATTCAACGTTGATGCAATGGTCAATGCAGATGGGGATTTGTATCTGTATGGAAAA[C/T]AAAGCGCACAAGTCTACTCTAAATTCCTTATGAAGGCAGAACCACTTGCTTTTGCACACTCACATGAATGCAGAGTCTCAACAACTTACAACCTGTATGATGATCTGGTATTCGAAACCAACCTTGATAATAAAATTGATACTGTGCTGACACCGTCTGAGCAAAAGGCCACAGTGAGAGTAAAATCTAAGTTCAACAACCATGAGTTTAACAAAGACTTGAGTGCTTACAATACCCCTGAAAGACTTGGAGTTGAAATGTCTGGATCCATCATCACCAACATCTTCAATACAGTTGACTCTGACAATCAAGACCACTTTTTCTCTGCCTTCCTAAAATATGATAAAAACAGCAACAGCCGTGCCTTAAGTCTGCCATTTATTGATGAGTTTCCATTTGACCTGCAACACATGAAACTTGCAGTTTTGAGGATTGTTGAGGCCATGCAGAGTTATATCAACAGAGAAGAAATCATTGTAGAAATTCAGAAACTGGCCACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12118
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Founder:
SL4_04_E8
KASP Assay Location:
Project idt12, Plate 2, Well G08
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028709 | Nonsense | 1967 | 3730 | 24 | 27 |
ENSDART00000133353 | Nonsense | 1967 | 3730 | 24 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31304855)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 31376068 |
GRCz11 | 20 | 31278947 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATATCAACAGAGAAGAAATCATTGTAGAAATTCAGAAACTGGCCACATA[T/A]GTTAGTGACTTTGTGAATGAACTGAATCTGGAAGAGAAAATCATAAAATT
Long Flanking Sequence:
AGCGCACAAGTCTACTCTAAATTCCTTATGAAGGCAGAACCACTTGCTTTTGCACACTCACATGAATGCAGAGTCTCAACAACTTACAACCTGTATGATGATCTGGTATTCGAAACCAACCTTGATAATAAAATTGATACTGTGCTGACACCGTCTGAGCAAAAGGCCACAGTGAGAGTAAAATCTAAGTTCAACAACCATGAGTTTAACAAAGACTTGAGTGCTTACAATACCCCTGAAAGACTTGGAGTTGAAATGTCTGGATCCATCATCACCAACATCTTCAATACAGTTGACTCTGACAATCAAGACCACTTTTTCTCTGCCTTCCTAAAATATGATAAAAACAGCAACAGCCGTGCCTTAAGTCTGCCATTTATTGATGAGTTTCCATTTGACCTGCAACACATGAAACTTGCAGTTTTGAGGATTGTTGAGGCCATGCAGAGTTATATCAACAGAGAAGAAATCATTGTAGAAATTCAGAAACTGGCCACATA[T/A]GTTAGTGACTTTGTGAATGAACTGAATCTGGAAGAGAAAATCATAAAATTCAGCAAGGACCTGACTGCGCTGTATGAGGACTATGGAATTACTCTCGACGACCTGGAGGCTTCTCTGATGAATCTAAAGCCTGTTTTGTTGAAGCTAGTCACTGAACTTGACACTTATGTAGTAGAGATAGAAAAGATTGTGAGGGAAATAATTACAAGTGGCACACCATCTGATGCTGCAATACAGAGGTTTACAGATATCCTGAATTCATTCAATGAGAAATATGACGTCAAAGCCATTGTTCTCACTGTTATTGAGGCTATTGAAAAATTTCTTAGGGAAATCGATGTAATGAGTATAAAGGGCAGCAGGGAAGTCTTCAAGCAATATGTTGATGAATATTTTGCTATTAAATCCAAAGTGGAGGAAATTTTGAGTGAACTGAAGCAGTTTGTTGCAAACTTTGACCAAGAAAAGTTCACTGAGGATGTGAAGAACTTTGTTACCTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43476
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Founder:
SL7_05_B8
KASP Assay Location:
Unknown
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028709 | Nonsense | 2093 | 3730 | 24 | 27 |
ENSDART00000133353 | Nonsense | 2093 | 3730 | 24 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31305231)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 31376444 |
GRCz11 | 20 | 31279323 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTAGGGAAATCGATGTAATGAGTATAAAGGGCAGCAGGGAAGTCTTCAAG[C/T]AATATGTTGATGAATATTTTGCTATTAAATCCAAAGTGGAGGAAATTTTG
Long Flanking Sequence:
TTATTGATGAGTTTCCATTTGACCTGCAACACATGAAACTTGCAGTTTTGAGGATTGTTGAGGCCATGCAGAGTTATATCAACAGAGAAGAAATCATTGTAGAAATTCAGAAACTGGCCACATATGTTAGTGACTTTGTGAATGAACTGAATCTGGAAGAGAAAATCATAAAATTCAGCAAGGACCTGACTGCGCTGTATGAGGACTATGGAATTACTCTCGACGACCTGGAGGCTTCTCTGATGAATCTAAAGCCTGTTTTGTTGAAGCTAGTCACTGAACTTGACACTTATGTAGTAGAGATAGAAAAGATTGTGAGGGAAATAATTACAAGTGGCACACCATCTGATGCTGCAATACAGAGGTTTACAGATATCCTGAATTCATTCAATGAGAAATATGACGTCAAAGCCATTGTTCTCACTGTTATTGAGGCTATTGAAAAATTTCTTAGGGAAATCGATGTAATGAGTATAAAGGGCAGCAGGGAAGTCTTCAAG[C/T]AATATGTTGATGAATATTTTGCTATTAAATCCAAAGTGGAGGAAATTTTGAGTGAACTGAAGCAGTTTGTTGCAAACTTTGACCAAGAAAAGTTCACTGAGGATGTGAAGAACTTTGTTACCTCAGCCAGATTCAGAGACTATGCAGACAATCTGGTGGCTAAAATCCCAACAGAGCAAATCAGCAAGATTCTTGAAAAAGCAAAACAACTGCTTAATCTACTGGGTAACAGAATGAATGCCATCTATACAAATGTGAGAGAAATTCTGGTGAAATCTGGGGTTGACAAGAAGATCGAAACTCTCCTCAAAAAAGTTGTTGAGCTTATCAAGAAGTTCAACATTGAAGAAACTGTTAAGACTCTTGCGGACACTTTGAAATCTATTCTGACCCCTGTCACTGAGCTGGTGGATAAGGCCATCAACTACTTGAAAACAACAGAGGCAAAGGAAATCATTGAAGATCTGAACAACTGCCTAAACCACTGCATTAAATATATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16833
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Founder:
SL4_09_B5
KASP Assay Location:
Project idt12, Plate 3, Well C01
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028709 | Nonsense | 2304 | 3730 | 24 | 27 |
ENSDART00000133353 | Nonsense | 2304 | 3730 | 24 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31305866)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 31377079 |
GRCz11 | 20 | 31279958 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCACTTGAAATCCGTCAAAAGCTTGAGGCAATCAGAGAGTTTGTTAACTA[T/A]GCTTTGTCATCTATGWGCGCTTGCATCGAAAAGCTGGAAAAAGTCAAART
Long Flanking Sequence:
AGAGACTATGCAGACAATCTGGTGGCTAAAATCCCAACAGAGCAAATCAGCAAGATTCTTGAAAAAGCAAAACAACTGCTTAATCTACTGGGTAACAGAATGAATGCCATCTATACAAATGTGAGAGAAATTCTGGTGAAATCTGGGGTTGACAAGAAGATCGAAACTCTCCTCAAAAAAGTTGTTGAGCTTATCAAGAAGTTCAACATTGAAGAAACTGTTAAGACTCTTGCGGACACTTTGAAATCTATTCTGACCCCTGTCACTGAGCTGGTGGATAAGGCCATCAACTACTTGAAAACAACAGAGGCAAAGGAAATCATTGAAGATCTGAACAACTGCCTAAACCACTGCATTAAATATATTAGATCATTTGACTACAACGCATTTGTGGATGAGGCCAATCAGAAAATCAAGAAGTTAACAAATGATCTTTACACCATGAGTTTGTCACTTGAAATCCGTCAAAAGCTTGAGGCAATCAGAGAGTTTGTTAACTA[T/A]GCTTTGTCATCTATGAGCGCTTGCATCGAAAAGCTGGAAAAAGTCAAAGTTGTGGATGTCGTCAAAAAATTCAGTGACATTGTCGATAGTGTAGTCTTCATTGACACCGAGGCACTCATTGAGGACCTTAGGAAAATACTTGCAGACATTGATATCAGAGAAGAAATCCAGAAGTTTCTGAAGCACGCAAGTAGCATCTCCACCAAGGTTGTGACCACTGCAACAGATGCATGCAGTGCTGTTATGCAAGTGATCCAAAACATCCTTAAAGATCAAGCAGTTGTCAACGAGCTGAAGCAAATCTGTGACAGAGTCAAAACAGTACTGAGAACAGCTGAATTTAAGATTCCATCTTTCATTTTTCCACTGACTGACCTTGTTGTGCCATCCATAAAAATAAGCTTAAAGAATCTTCAGGAAATCAACCTCCCATCTTCACTGATTGACCTTCCAGGGTTTACAATTCTGCAATATTACACTGTGCCACCAATCAGAGTAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6637
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Founder:
SL4-73
KASP Assay Location:
Project 554.35, Plate 18, Well E06
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028709 | Nonsense | 2696 | 3730 | 24 | 27 |
ENSDART00000133353 | Nonsense | 2696 | 3730 | 24 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31307040)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 31378253 |
GRCz11 | 20 | 31281132 |
KASP Assay ID:
554-5428.1 (used for ordering genotyping assays)
KASP Sequence:
TTGCCCTGGCAGGTGGAATATCTGCAAATATCAAAACAACATATAATGAC[A/T]AGTTAAATGCAGWCCTTTGGAACAGTGAATATTATTACGGTAATGATATA
Long Flanking Sequence:
CTAAATACATCAGCAAGCACAAATTTTCTGATCTGACAATCCCAGAATTCACCCTCCCTGGAGTTCCTACTGAGGTCATGGTGCCATGCTTTGGAAAGTTGTATGGTGAGGTTAGAGTCACCATTCCAATTTTCAACATGAGAACTACAGTAGAATTCCTAAACTCTACTGAAAGTGCAGAAACCCCTCAGTTTGTAGGGCACATTACCTCACATGGATCTTCAGAATATGACCTTCTTAAATACACCTTGGACTCCACAGCTCGTGTTGCCATGCCTAAAATGAGTCGTGTGATTCTTGCAGAAACCCTGAAGATCACTCACAGTGTACTAGCCATTGACCATCAATCCTCAGTCTCACTTTATGGCCTCTCAGCCCAGGCTTCTTCCAAGAGCACCATGAAGATTACCTCTTCCACCTATAATGCTAACATCGTTAACACTGCTTTCTTTGCCCTGGCAGGTGGAATATCTGCAAATATCAAAACAACATATAATGAC[A/T]AGTTAAATGCAGACCTTTGGAACAGTGAATATTATTACGGTAATGATATAATTCTAAAGCAGGATGGTCTAAAACTCCTTCTGACCATGGAAGAAGAGGCCAAGGGACATATATCTGTGCTCGAAAAGTCTGATGATATCACTGGCAAGAGTAGTTCATCTATAATTATTACTCCAACAACATTCTCTCTGATCATTTCTGTGGATTCCAGCAGTTCTGTTTCAAACATTAAAAAAAGTATTAAAGCTGACGGTGTTGCTCTGAGCTATGTCGACTTCACTGCCAGCATTGAAGGAACTAGTGATTCTGAGTTATTTTTACTGAATGCAGCTGGAAAGGCGGATCTCAGACAAATGAAAGTAGAGATGAAGGCTGACCTTGACACAAAATATGCTGGACTGCTCAGTGGTACCTTCACCAGTGCCTTTAACTTCTTAGTGCAACCTTTTGAGGTAGTCCTTGATTTCAAGAACAAGGCTAATACTAAGCTCAACCTTGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6638
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Founder:
SL4-123
KASP Assay Location:
Project 554.35, Plate 16, Well A04
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028709 | Nonsense | 2875 | 3730 | 24 | 27 |
ENSDART00000133353 | Nonsense | 2875 | 3730 | 24 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31307579)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 31378792 |
GRCz11 | 20 | 31281671 |
KASP Assay ID:
554-5286.1 (used for ordering genotyping assays)
KASP Sequence:
CTCAACCTTGTAGAGCCCCTGTCTGCTAAGATTGATCTTCAGAACAATTA[T/A]ACTGTCATCCTTAATAGCGACGAGCAGATGTTGAGCACTGGGTTACTTGC
Long Flanking Sequence:
GGTAATGATATAATTCTAAAGCAGGATGGTCTAAAACTCCTTCTGACCATGGAAGAAGAGGCCAAGGGACATATATCTGTGCTCGAAAAGTCTGATGATATCACTGGCAAGAGTAGTTCATCTATAATTATTACTCCAACAACATTCTCTCTGATCATTTCTGTGGATTCCAGCAGTTCTGTTTCAAACATTAAAAAAAGTATTAAAGCTGACGGTGTTGCTCTGAGCTATGTCGACTTCACTGCCAGCATTGAAGGAACTAGTGATTCTGAGTTATTTTTACTGAATGCAGCTGGAAAGGCGGATCTCAGACAAATGAAAGTAGAGATGAAGGCTGACCTTGACACAAAATATGCTGGACTGCTCAGTGGTACCTTCACCAGTGCCTTTAACTTCTTAGTGCAACCTTTTGAGGTAGTCCTTGATTTCAAGAACAAGGCTAATACTAAGCTCAACCTTGTAGAGCCCCTGTCTGCTAAGATTGATCTTCAGAACAATTA[T/A]ACTGTCATCCTTAATAGCGACGAGCAGATGTTGAGCACTGGGTTACTTGCCCGCTTTAACCAGTACAAGTACAGTCACAATTTCACATTGGCCAACAACGAGGATGAGGCTGGCATTTATGCTGCAGTAAATGGCGAGGCTAATTTGGAATTCCTAACAATCCCTTTCAGTATTCCAGCAATGGAATTAGAAACACTAACTATGGTAATTGAAATTCCAGAAATCAGTAACATCAATCTATATGAACAGACTGGGCTTAAGCATGTTTTGACTGACTTCGACCAGGCCATTGATGTAGATGCAAAGATGGTTTACCAGAAGAATGACTTAACCTCTGAGTTGTCTTTCAAGTCCTCCATATTCAATCTTAATGCCAATGCTGGTTTCTATCAGAAGGATAACCCTGTAATTCGTTTTGGAGTCATCACTGCTTCTGAGTTTGAGTCACTGAAGGCCAAGCTTGAAGGAACCAGCAGTCTGAGCACCAAAAGTGGATTCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37071
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Founder:
SL6_07_E5
KASP Assay Location:
Unknown
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028709 | Nonsense | 3042 | 3730 | 24 | 27 |
ENSDART00000133353 | Nonsense | 3042 | 3730 | 24 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31308078)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 31379291 |
GRCz11 | 20 | 31282170 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAAGGCCAAGCTTGAAGGAACCAGCAGTCTGAGCACCAAAAGTGGATTC[A/T]AATTAGCCAATTCTTTGCTTCTAGAAAATCGCCACATTGAAGGAACCCAT
Long Flanking Sequence:
ATACTGTCATCCTTAATAGCGACGAGCAGATGTTGAGCACTGGGTTACTTGCCCGCTTTAACCAGTACAAGTACAGTCACAATTTCACATTGGCCAACAACGAGGATGAGGCTGGCATTTATGCTGCAGTAAATGGCGAGGCTAATTTGGAATTCCTAACAATCCCTTTCAGTATTCCAGCAATGGAATTAGAAACACTAACTATGGTAATTGAAATTCCAGAAATCAGTAACATCAATCTATATGAACAGACTGGGCTTAAGCATGTTTTGACTGACTTCGACCAGGCCATTGATGTAGATGCAAAGATGGTTTACCAGAAGAATGACTTAACCTCTGAGTTGTCTTTCAAGTCCTCCATATTCAATCTTAATGCCAATGCTGGTTTCTATCAGAAGGATAACCCTGTAATTCGTTTTGGAGTCATCACTGCTTCTGAGTTTGAGTCACTGAAGGCCAAGCTTGAAGGAACCAGCAGTCTGAGCACCAAAAGTGGATTC[A/T]AATTAGCCAATTCTTTGCTTCTAGAAAATCGCCACATTGAAGGAACCCATGAAAGCACTGCAACTATGAACCTGAATAACTTTGAAGTTACACTGTCTATGGCCACAGATGCAAAAATGAATCTACCAATTCTTACAGCTAATGCCAACCACCAACTTACTGCTGACAACAAGGCCAACCCAAAAGCAGACTCAACATTTAAGATGGATTACAACTTTGACGTTCCCATTATTAAGCTTGTTGGAAAGGGAAATGCTGAAACCATCTTAAAAGGCGAAGGAACTCGTACGTTTATCTCTGCTGAGACACTTATAAAGAGCAATATTGATGGAACATTCCTAGATCGTGGTATTTTGAAAGGAACTCTGAATTACGATGAATCCCTGTATGTGAATGGTAATAGTTTGCGATATGCCCTTAAGACTGGTGGTAATGGAGACCTGAACTATGGTGATTTCAAGGTGGCTTTTGATGTGGATGAAAACCTGTCTGTAGAGACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10039
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Founder:
SL4_02_B8
KASP Assay Location:
Unknown
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028709 | Nonsense | 3214 | 3730 | 24 | 27 |
ENSDART00000133353 | Nonsense | 3214 | 3730 | 24 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31308596)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 31379809 |
GRCz11 | 20 | 31282688 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTYGATGTGGATGAAAACCTGTCTGTAGAGACAGCCAATGAGCAYGTATA[T/A]GCTACAATGAAGTTTACTTCCAATAATGAAGCAARTGTTGGATCTTTCAA
Long Flanking Sequence:
CTTCTAGAAAATCGCCACATTGAAGGAACCCATGAAAGCACTGCAACTATGAACCTGAATAACTTTGAAGTTACACTGTCTATGGCCACAGATGCAAAAATGAATCTACCAATTCTTACAGCTAATGCCAACCACCAACTTACTGCTGACAACAAGGCCAACCCAAAAGCAGACTCAACATTTAAGATGGATTACAACTTTGACGTTCCCATTATTAAGCTTGTTGGAAAGGGAAATGCTGAAACCATCTTAAAAGGCGAAGGAACTCGTACGTTTATCTCTGCTGAGACACTTATAAAGAGCAATATTGATGGAACATTCCTAGATCGTGGTATTTTGAAAGGAACTCTGAATTACGATGAATCCCTGTATGTGAATGGTAATAGTTTGCGATATGCCCTTAAGACTGGTGGTAATGGAGACCTGAACTATGGTGATTTCAAGGTGGCTTTTGATGTGGATGAAAACCTGTCTGTAGAGACAGCCAATGAGCACGTATA[T/A]GCTACAATGAAGTTTACTTCCAATAATGAAGCAAATGTTGGATCTTTCAACACTAAAGGAGTTCATTCCAGCCAGGCTACTCTCGATATGGCTCTTCTGAAGTCACTGGTGGCTGATATGAAAATAGACTTGTCTCAACCGAGCACCTTTGGTGAACTTAGCATCTTCGAGACAATGAAAGTAGATCTCAGTGCTCCCAAGCAGAAAATTGATATCCTTTCAACAATCAAGTCTCCGGTATACACCACAGATGTTCGTGCTAAACTAGACGGTAATGCCCCAGATTACAAAACGGTTCTGAAGGCTTCAGCCACTTCACCAGTTGTGCGCCTGCAGTATGATCTTGACAGTAAGTTTCAACATATACTATATGTACAATGATACTCAATGTTAATAAAAGGAAATTAAATCTTGGATTTGTGTGCTTTTACACAAAACAGGCTCCATGAGTTCTACTATGGAGAATGGTGCCCTTGTTGTCGGAGCTAACGCTGTACTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32301
Status:
Available for shipment
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For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Founder:
SL6_01_A9
KASP Assay Location:
Unknown
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000028709 | Essential Splice Site | 3331 | 3730 | 24 | 27 |
ENSDART00000133353 | Essential Splice Site | 3331 | 3730 | 24 | 27 |
Genomic Location (Zv9):
Chromosome 20 (position 31308947)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 31380160 |
GRCz11 | 20 | 31283039 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGGCTTCAGCCACTTCACCAGTTGTGCGCCTGCAGTATGATCTTGACAG[T/C]AAGTTTCAACATATACTATATGTACAATGATACTCAATGTTAATAAAAGG
Long Flanking Sequence:
AATTACGATGAATCCCTGTATGTGAATGGTAATAGTTTGCGATATGCCCTTAAGACTGGTGGTAATGGAGACCTGAACTATGGTGATTTCAAGGTGGCTTTTGATGTGGATGAAAACCTGTCTGTAGAGACAGCCAATGAGCACGTATATGCTACAATGAAGTTTACTTCCAATAATGAAGCAAATGTTGGATCTTTCAACACTAAAGGAGTTCATTCCAGCCAGGCTACTCTCGATATGGCTCTTCTGAAGTCACTGGTGGCTGATATGAAAATAGACTTGTCTCAACCGAGCACCTTTGGTGAACTTAGCATCTTCGAGACAATGAAAGTAGATCTCAGTGCTCCCAAGCAGAAAATTGATATCCTTTCAACAATCAAGTCTCCGGTATACACCACAGATGTTCGTGCTAAACTAGACGGTAATGCCCCAGATTACAAAACGGTTCTGAAGGCTTCAGCCACTTCACCAGTTGTGCGCCTGCAGTATGATCTTGACAG[T/C]AAGTTTCAACATATACTATATGTACAATGATACTCAATGTTAATAAAAGGAAATTAAATCTTGGATTTGTGTGCTTTTACACAAAACAGGCTCCATGAGTTCTACTATGGAGAATGGTGCCCTTGTTGTCGGAGCTAACGCTGTACTTACACATCAGGACTTCACTATGGATATCAGCAATGCTATTCGCATGAGGTAAATAAAAAATCTTTCTGATTTTTTGTTTGAATATTAGTACTATGTTTGCAATTATAATTTATTTTATAAAGCAATTCTGAGTGTAAATCTAAATTCTACTTATCATTAGCGAAAGGAGCCATATTCTGAATGTGGACATCACCAGCCAAACATTTACCGATGTTAACCTTCGCTATGCTGCTCGGAGTGATGGGATAAGTGGCTCTGTTTCCACACCGGGGTCTGGCCTCCTTGGCTTTCAGCTCCAAGGAAATATTCCATCCCAAATGAATGCAAGGCTCTACTGTCGTTATGCTGTAAGT
Associated Phenotype:
Not determined