ZMP

ef1a

Ensembl ID:

ENSDARG00000020850

ZFIN IDs:

ZDB-GENE-050706-188, ZDB-GENE-990415-52

Description:

Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:Q92005]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa23594	Essential Splice Site	Available for shipment	Available now
sa45683	Nonsense	Mutation detected in F1 DNA	Not yet available
sa36916	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa23594

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000023156	Essential Splice Site	48	462	None	8
ENSDART00000039129	Essential Splice Site	48	462	None	8
ENSDART00000129362	Essential Splice Site	48	462	None	8

Genomic Location (Zv9):

Chromosome 19 (position 45288206)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	43524259
GRCz11	19	43119856

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGGAATCGACAAGAGAACCATCGAGAAGTTCGAGAAGGAAGCCGCTGAGG[T/C]AAGCGTTCAACCGGTTGGATTTATTCTTAATCAATTTATGCGCTTCAAAT

Long Flanking Sequence:

GAAAAGAACAAAGGCACAAGCGGTTTGAAGTCACGGGTCCGTTAAAAGCCTATCACACATTCCCGCATCCAGCAACTGTTACAAGTGGCCGGAGAGCCAGATGTCTGCCTCAGTTTGGATTCCGTTCAGACATTTCTGTTTTTTTTTAATCATCCTGTAACATAACACCGTCTTACTCTAAAGAAACACGTGTCGCAGCTGCCTTATGGTGAACTAGGCCGGTTCAAACTCTGGGCCATCTTGTCACTTGTGTTACGAAATCACCGCTCAAAAGTTTTAATAATGAGAAATATGTATTTTTGTGGTCCATCATTAACTTTCACATTTTATCTTGGTCCGCAGAAACTTATCAATCATGGGAAAGGAAAAGACCCACATTAACATCGTGGTTATTGGCCACGTCGACTCCGGAAAGTCCACCACCACCGGCCATCTGATCTACAAATGCGGTGGAATCGACAAGAGAACCATCGAGAAGTTCGAGAAGGAAGCCGCTGAGG[T/C]AAGCGTTCAACCGGTTGGATTTATTCTTAATCAATTTATGCGCTTCAAATGCGGCACAGTTCTGTAACGAGAGCCAAAATGGCGGCGCAGCACGCGTTTCTCGGCTCAAGCCGGCTGGGTGTGGAGTGGGCGGGGTTTACGCGGCACTCTCGATGACGTAGCAATTTCTGTAATGGCGCCTAGTAGGCCGCAACATGTGCACTTTAATCAATTCAGTATTTCAAGCACTGTAGCTTAAACTTTGCAAAACACTTTAAAGATTTAATAATGATTTGACATTTATTTAAAATGTAATTTTTTTTTTGTTAATCAGATGGGCAAGGGCTCCTTCAAGTACGCCTGGGTGTTGGACAAACTGAAGGCCGAGCGTGAGCGTGGTATCACCATTGACATTGCTCTCTGGAAATTCGAGACCAGCAAATACTACGTCACCATCATTGATGCCCCTGGACACAGAGACTTCATCAAGAACATGATCACTGGTACTTCTCAGGTATGTC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa45683

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000023156	Nonsense	164	462	4	8
ENSDART00000039129	None	None	462	None	8
ENSDART00000129362	None	None	462	None	8

Genomic Location (Zv9):

Chromosome 19 (position 45288951)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	43525004
GRCz11	19	43120601

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGCTGATCGTTGGAGTCAACAAGATGGACTCCACTGAGCCCCCTTACAGC[C/T]AGGCTCGTTTTGAGGAAATCACCAAGGAAGTCAGCGCATACATCAAGAAG

Long Flanking Sequence:

CAAAACACTTTAAAGATTTAATAATGATTTGACATTTATTTAAAATGTAATTTTTTTTTTGTTAATCAGATGGGCAAGGGCTCCTTCAAGTACGCCTGGGTGTTGGACAAACTGAAGGCCGAGCGTGAGCGTGGTATCACCATTGACATTGCTCTCTGGAAATTCGAGACCAGCAAATACTACGTCACCATCATTGATGCCCCTGGACACAGAGACTTCATCAAGAACATGATCACTGGTACTTCTCAGGTATGTCTACAACTGTGATTTAAGAAACAAAGTTGGTCTAACTTGACTATAGTTGATTTTAAACCATCACTGTTCTCCTCCTCTAGGCTGACTGTGCTGTGCTGATTGTTGCTGGTGGTGTTGGTGAGTTTGAGGCTGGTATCTCCAAGAACGGACAGACCCGTGAGCACGCCCTCCTGGCTTTCACCCTGGGAGTGAAACAGCTGATCGTTGGAGTCAACAAGATGGACTCCACTGAGCCCCCTTACAGC[C/T]AGGCTCGTTTTGAGGAAATCACCAAGGAAGTCAGCGCATACATCAAGAAGATCGGCTACAACCCTGCCAGTGTTGCCTTCGTCCCAATTTCAGGATGGCACGGTGACAACATGCTGGAGGCCAGCTCAAACGTACGTTTTCTATGCAATAGGCTTTCTAATAATAGTGTTTAATATGCGTGTTTCCACTCGCTGACCATGCTTGTTTTGCTTCAATAGATGGGCTGGTTCAAGGGATGGAAGATTGAGCGCAAGGAGGGTAATGCTAGCGGTACTACTCTTCTTGATGCCCTTGATGCCATTCTGCCCCCTAGCCGTCCCACCGACAAGCCCCTCCGTCTGCCACTTCAGGATGTGTACAAAATTGGAGGTTTGTATTCTAATTGGGTTACGTTGTACTTGGTTACCTGAAATTGACTCTGAAGTGGTTCTCTTTGAGTTGCTTAATACTTTAAAGCCATTTCAAAGAGCTGAGAACCCATACCCATTGACTAACATAGC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa36916

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000023156	None	None	462	None	8
ENSDART00000039129	None	None	462	None	8
ENSDART00000129362	Essential Splice Site	108	462	3	8

Genomic Location (Zv9):

Chromosome 19 (position 45294181)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	43530234
GRCz11	19	43125831

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCCCGGACACAGAGACTTCATCAAGAACATGATCACTGGTACTTCTCAGG[T/C]ATGTCTACAACTGTGATTCTAGAAATTTCAATTTTCAAGGATTTTTAAAA

Long Flanking Sequence:

CTATTATTCTATCCTTTTATCGTTCTACCTATTGTTCTATCCTGTCATTCTATCTGTTGTTCTATCTATTATTCCATCTATCTTTCTGTCATTCTATCTATCGTTCCATCTTTCTCGCCTGTCGTTCTATCTATTGTTCTTTTGTTCTGTTATTCCCTCTTATCTTTTTATCATTCTATCTATCTTTATATCATTCTATCTATCTATATATATACTGTCATTCTATTTACCATTCTTTTGTTCTATCTATTATTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAACTGAAGGCCGAGCGTGAGCGTGGTATCACCATTGACATTTCCCTTTGGAAATTCGAGACCAGCAAATACTACGTCACCATCATTGATGCCCCCGGACACAGAGACTTCATCAAGAACATGATCACTGGTACTTCTCAGG[T/C]ATGTCTACAACTGTGATTCTAGAAATTTCAATTTTCAAGGATTTTTAAAATTAACTTGATTCCTCCTCTCAGGCTGACTGTGCTGTGTTGATCGTGGCTGCCGGTGTCGGTGAGTTTGAGGCTGGTATCTCCAAGAACGGACAGACCCGTGAGCACGCCCTGCTGGCCTACACATTGGGAGTGAAACAGCTGATCGTTGGAGTCAACAAGATGGACTCCACTGAGCCCCCTTACAGCCAGGCTCGTTTTGAGGAAATCACCAAGGAAGTCAGCGCATACATCAAGAAGATCGGCTACAACCCTGCCACCGTTGCATTTGTGCCGATTTCAGGATGGCACGGTGACAACATGCTGGAGCCCAGCTCAAATGTAAACATCTGAAAGATATTATAAATATAAATGCCTTTAAGTGTTTGCGATCATTCATACTTAAAGGTCCCATGTAGTGCTTTGAAATGTGCATTTTTTATTGAGTGTTTGGCGTAATCGCAACTGAAACA

Associated Phenotype:

Not determined