Busch Lab

ZMP

si:ch211-112m17.3

Ensembl ID:
ENSDARG00000020777
ZFIN ID:
ZDB-GENE-041014-309
Description:
Novel protein similar to human chromosome 6 open reading frame 204 (C6orf204) [Source:UniProtKB/TrEM
Human Orthologue:
C6orf204
Human Description:
chromosome 6 open reading frame 204 [Source:HGNC Symbol;Acc:21638]
Mouse Orthologue:
Gm9766
Mouse Description:
predicted gene 9766 Gene [Source:MGI Symbol;Acc:MGI:3642684]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa23786 Nonsense Available for shipment Available now
sa23787 Nonsense Available for shipment Available now
sa31047 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa23786
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000061141 Nonsense 173 781 3 13
ENSDART00000146349 None None 433 None 10

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 41938891)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 42010050
GRCz11 20 41907160
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTCACCTCTCGACATCCCCCTGGACATGAAGGATCCCCGTCCCGTGCGT[C/T]GATGGTCCTCCCTCACCCGCCTCACCGCCCAAGAAAAGCCCTCTCCAACA
Long Flanking Sequence:
TACATTCATTACAGTTGAAGAATAACATCCAAACACTTTCTCTTTTTTTATTTTAGAATTGGTTTTAATTAAATAAATCTGTCATCGTCAGCCCGTATAAGAATATTTTAAAAACAATTGCTTGGAACTCTCCAATATTTATTTATTTATTTTTTTTTATGATTGGTGAAATCATAATTTGACTTTTTACACTTTTAAATGTATTATTATTATTGTTATAAAGAATAATAATAATTTTACTCATTACAGTCCAAGAGTAAAAACTTTTTAAAAAATAGTAAAAACTTTTCTCTCTTCCAGATCACTCCAGCTCTAGCGGGACGTTGTCCTTCCTCCCTCTGCGTCCCCACGGCCCGATCCCGACGGCCCACGTCATGCCCTCTCCATCCAACTCCAAACTCAGCGCTCCCTCTGCACCCAGCAGCCCCTGGAGCAGCAGCTGCCAGCTTCCCTCACCTCTCGACATCCCCCTGGACATGAAGGATCCCCGTCCCGTGCGT[C/T]GATGGTCCTCCCTCACCCGCCTCACCGCCCAAGAAAAGCCCTCTCCAACAAACCGTCCTTCCCACCGCACGGACCCACATGGATCCCTAGATCGAGGTGTGCTTTACGGATACCGGCACGACCCTCAATACTCTGATGGATTTATTTCTGAAAACTTGCTTAAACTTTCGACCAATAAGTATGACCTGGGTAGCAGCAACACTTTAGGTAAATCGGACTCATGTTGTTCATCTCCCCTGAAGCCGAGTACACTAGACCTCAGTTTTAGTGCCTTACCAGAGAGTAAGACGCCACCTGTGGGACTGGCAACGACGGGACAGAGAGGGTCGTCTTCACTCAGGCAGCAGGCGGTCGGTGGGTCACCCATCCAGCCAGCGGTCAGGACTCAGATGTGGCTGAGTGAGCAGATGGAGTACCGGCCGGGACCTGACGGGTGTGGATCATGGCAGCAGGAGCAGCAGCAGCAGAGGGAGAGACTCAGACAAGACTCTGAACAGGTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23787
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000061141 Nonsense 248 781 3 13
ENSDART00000146349 None None 433 None 10

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 41939118)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 42010277
GRCz11 20 41907387
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGTATGACCTGGGTAGCAGCAACACTTTAGGTAAATCGGACTCATGTTG[T/A]TCATCTCCCCTGAAGCCGAGTACACTAGACCTCAGTTTTAGTGCCTTACC
Long Flanking Sequence:
ATAATAATTTTACTCATTACAGTCCAAGAGTAAAAACTTTTTAAAAAATAGTAAAAACTTTTCTCTCTTCCAGATCACTCCAGCTCTAGCGGGACGTTGTCCTTCCTCCCTCTGCGTCCCCACGGCCCGATCCCGACGGCCCACGTCATGCCCTCTCCATCCAACTCCAAACTCAGCGCTCCCTCTGCACCCAGCAGCCCCTGGAGCAGCAGCTGCCAGCTTCCCTCACCTCTCGACATCCCCCTGGACATGAAGGATCCCCGTCCCGTGCGTCGATGGTCCTCCCTCACCCGCCTCACCGCCCAAGAAAAGCCCTCTCCAACAAACCGTCCTTCCCACCGCACGGACCCACATGGATCCCTAGATCGAGGTGTGCTTTACGGATACCGGCACGACCCTCAATACTCTGATGGATTTATTTCTGAAAACTTGCTTAAACTTTCGACCAATAAGTATGACCTGGGTAGCAGCAACACTTTAGGTAAATCGGACTCATGTTG[T/A]TCATCTCCCCTGAAGCCGAGTACACTAGACCTCAGTTTTAGTGCCTTACCAGAGAGTAAGACGCCACCTGTGGGACTGGCAACGACGGGACAGAGAGGGTCGTCTTCACTCAGGCAGCAGGCGGTCGGTGGGTCACCCATCCAGCCAGCGGTCAGGACTCAGATGTGGCTGAGTGAGCAGATGGAGTACCGGCCGGGACCTGACGGGTGTGGATCATGGCAGCAGGAGCAGCAGCAGCAGAGGGAGAGACTCAGACAAGACTCTGAACAGGTCAGATTTGTTGTTGTTTTTTATGTAGGGGATACTGACGTATGATGGGTGCTACTGGAGGATTTATTTAATTTTATTTTATATTTTATTTTATTTTATTTATTTATTTATTTATTTGTTTGTTTGTTTTAGTTTAGTTTACCCATTACAAATTTGACATAATTAAATCATTTTATATTAGAATTTATTTTATTATTATTTATTATTTTAATTAAGTATTATTTATTTGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31047
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000061141 Essential Splice Site 667 781 11 13
ENSDART00000146349 Essential Splice Site 319 433 8 10
Genomic Location (Zv9):
Chromosome 20 (position 41986714)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 42057873
GRCz11 20 41954983
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTTGGAGCGTGAGGAGGAACTGGACACGCTCTCCACCACTCTTAAACAG[G/C]TACAGCACTCTAAAACCACCTGCTACAGGACTCTAAGATACCGCTGAGAC
Long Flanking Sequence:
CATTATTTCTGTTTAGTGACAAGACTTTAGTCTAAGCAAAGTCAGACCTTACTGTCCTAATTAAATAACTAAAAATCAAGGCATGATATTTTATTTTGATAAAATAAGTGTAAATAGAGACCTTTGCCTTTCATATAAGCCCCTTCTAACACCAAACAATCAGCTAGAAGTCAAGTTATTATTTGTTGTTCCTAAAACTTAAAATAGGCGAAAAGACTTTTGTCAGGTAGTGTAGATCAAATAAAAGTGTGATGTATGCTTTATTATAAACTTTATTCAGATTTATATTTTTGTCTTACAGTCTAAAGACTCAAAACTGTTCAATCAAATTCAAATTCCTCCACATGTCAGGCTTCACAGGGTTTAATGCACTAATATCCACCTTATTTCAGGCTCTGGAGAAGAAGCTTCAGCGGGAGAGAGGGATCACACAGGAGCTCCGCAAGCAGCTGTTGGAGCGTGAGGAGGAACTGGACACGCTCTCCACCACTCTTAAACAG[G/C]TACAGCACTCTAAAACCACCTGCTACAGGACTCTAAGATACCGCTGAGACTTTTTAGTCCGACATGATACAGATGAGGCCTGAAGTGAGAGGCTTGATTGAAGGCTCATTTTTGTGCCATTAAATTCCCCATCCTGCTTTTGATGGCAGTGGAGTCATGAATAACCCAACTGGCCCTCAGCGCTCCATTAGCATTCAGGACATCATTTTTCAGCACGCCGTCTCAAGGTGAGCGAGAGCAGAGCGATTCACTGAGGCGCAGTCATGCGTGATACTGACACACACTTTCACACTGACAATGCCGTACATCATACTGCTGACACGGGGACGTATGATTATTAGAAGCACACGCAGGTATGAAAGAGACCATGCAAATTATGATGATGTCAATTCAGTACAAAAATACACGAAACAATAATATTAGTTATTTTTTATGTATTATCTTTCAAAATAATATTTATTTCAGAGACGCAAAGCTGAAAACTTGCAGCATCATTACTT
Associated Phenotype:
Not determined