Busch Lab

ZMP

gtdc1

Ensembl ID:
ENSDARG00000020642
ZFIN ID:
ZDB-GENE-050417-8
Description:
Glycosyltransferase-like domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q568B7]
Human Orthologue:
GTDC1
Human Description:
glycosyltransferase-like domain containing 1 [Source:HGNC Symbol;Acc:20887]
Mouse Orthologue:
Gtdc1
Mouse Description:
glycosyltransferase-like domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:2444269]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa10288 Essential Splice Site Available for shipment Available now
sa34657 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa10288
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000024572 Essential Splice Site 174 433 4 11
ENSDART00000127135 Essential Splice Site 174 433 3 10
ENSDART00000024572 Essential Splice Site 174 433 4 11
ENSDART00000127135 Essential Splice Site 174 433 3 10
Genomic Location (Zv9):
Chromosome 9 (position 26904582)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 26060368
GRCz11 9 25871237
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCCAAGTGTCACGTCCTCCACTTCCCCATTCGCTTTCCCGATGTCACAAG[G/A]TCTGTCCTTACATCCCTCACCACAGCCTTCCAGGGATCACTCCTCCACTG
Long Flanking Sequence:
TTCATGACTACAGACAAAGCAGAATAATATAATAAGAAAAAATCAGTTTGCAACATCAAGCAGCATAGCATGCTGTTTTTAATGTCTAAAAATTAATAGAAGTTAATGAAACTTTATATGTAAAGAATAAGGTCAATACCGCATGTCTTTGGACTGTAGGGGAAACTGGAGCACCTGGTGGAAACCTATGCAAACATTGGGAGAACATGCAAACTCCACACAGAAATGCCAACTGACCTAACTGGGACTCGAACCAGCGACCTTTTGCAACAGTGCTAACCAATTTTTCTTCTTTGATCATCTAAAAGGACTTTTTTTTCCCACAGCCTGGTTGCGGATGTGGTGGTGTTCAACTCCTCGTTTAACATGGAATCCTTTCTCTCGTCCATCTCCACCTTCATGAAGACCATGCCTGACCATCGGCCCAAAGATCTGGAGCGGCTCATCCGTCCCAAGTGTCACGTCCTCCACTTCCCCATTCGCTTTCCCGATGTCACAAG[G/A]TCTGTCCTTACATCCCTCACCACAGCCTTCCAGGGATCACTCCTCCACTGATTAAAAAATTCGCTTGCGAGTTCACTCTTAATCCGCCCCCAAAAGCTGATCGCGTATGCAAGCGTGGTTAATGGCGAGTGGGCAAAGTTGTGTAAGAAAGTGATTAGAATAGACAGCTTTAATATCCTGTGTGGATCACTTGACACGCTCCGGCTACAGATACGTGCTTGTGCTCGGGCGAACATGCACACACATACACAACATGCCCATTGGGACAGGAAGCGATTTCTTTGTGCCGTAGTCTGTTTGACTGTAGATATTTGTGTTTGATTTTTGGAGCAGGCCATGATGTAGTATCAAAATTAGGGAGGATTTTTTTTTACTCGGGGCGTTTCATCTGCAGCAAATGGCAAGCAAATCAAACTGATATTCAAATAGAGTTTTATTGGACAGGTTATTAAAATTCACCTCATTTCCAAAAACAGAACGTAGTTGTATTTGTTTCTTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34657
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000024572 Nonsense 379 433 10 11
ENSDART00000127135 Nonsense 379 433 9 10
Genomic Location (Zv9):
Chromosome 9 (position 26942374)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 26098160
GRCz11 9 25909029
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAAATATGTATTTTCCTCTTGTAGCAACATATCTGTATTCAACACCTGAA[C/T]AGCTGTGCAAAAGACTACAGGAATTCTGCAAGCGTCCGCAATTAGCCAGA
Long Flanking Sequence:
CAATATATTTAGTCAATACAGTACAGATGCACTATGGAATTGAGCCCTACAGCATGTGTCATAAATCTTTTCTTTCAGGTTAGAAGCAGTGCATTGTGGATGTTACCCCCTGTGTCCGAAGGCTTTGGTCTACCCTGAAATATTCCCTGGTAAAATTCTTCTCTAATTTTCCTGATTTGTCTGTGAAGATAAAAGCAGCTTGATTTCACATGCAATAGAAGATTTATTGTCATAGGCAAAGCCGTTATGTTCAACTTCTGTATATAATGACTTATTCATCTTAAAGCACAATCGGAAGAATTTGCCATAAACTATTCTGGCATTTTTATATAAATAAATAAATATAACCACAGTTCAATAATGTACAGCATCACACAGCATGGTGTCAGCTGAATTTTTAATGCTGAAAGTGCCTGCTATCTCATCTGCTCTTTGAGGTTTCTTACTTATCAAATATGTATTTTCCTCTTGTAGCAACATATCTGTATTCAACACCTGAA[C/T]AGCTGTGCAAAAGACTACAGGAATTCTGCAAGCGTCCGCAATTAGCCAGACAACATGTTGTTCAGGTAAACAGTGCTCATTTTCCTGGAAATCAAATTGACTACAAAGACTTGGTTCTGGAATTGTGCATGAATACATTTTCATCAAGGCAAATACGTGCCAGTAAACATGATCAGTAATCAGTGCAAGTTAAACCTCTTACTGGAATCAGAGACTGTGTTTGCACCTGTTGTCGAAATGCATTGTCAGTTATTTAGTCAGTAGGGACACTTTACCTTTTCCAGTCGGTATTCAACTAGATAGTTTACTGTATACCCTCTGTAGAATCACACAAAATGACACACACATTTTTAATACTAGAAGATCCTTTCACGTGTTCAAAAGCACATTGGTTCTATTTGATTTTGTTGGCTTTAATTCTGTGAGGATTGTTTTTGTATTCACCTTAAAGATGCTGTATGTAAGTTTTTGACTCTTCTAAAGCATGAAAATATATTATG
Associated Phenotype:
Not determined