ZMP
pif1
Ensembl ID:
ZFIN ID:
Description:
ATP-dependent DNA helicase PIF1 [Source:UniProtKB/Swiss-Prot;Acc:Q7ZV90]
Human Orthologue:
PIF1
Human Description:
PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26220]
Mouse Orthologue:
Pif1
Mouse Description:
PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:2143057]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa19721 | Essential Splice Site | Available for shipment | Available now |
sa15503 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa19721
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000006549 | Essential Splice Site | None | 639 | None | 13 |
The following transcripts of ENSDARG00000020289 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 16935530)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 17443066 |
GRCz11 | 2 | 17114235 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCGTACACTACTCTACTAAGTGCTTTAAGCTGCTTTTGTGTTTCTATTGA[A/G]GGGAAGATGCTGGGGCAGATGGAGCCAGCCGAGCTTCAGTGCACAGTGGC
Long Flanking Sequence:
ATGTCTGTATTTTTACGATCTTTACATATAAGTTAGTTCACTTTTTAGATTAGCGTACTGTTACAGTTACGACGTAAAAAGCCTTTTTGTCTATATTGTTAATGTACTATTTGCTGAAATCCTTAAACCAGACTATCGTTGAGAGAAAGTCATTGTTTTTAAAATGACGTATTAAGGAGACGGTTTACTCTAAGTGAAAATTGTAGTATTTAGTCACCCTTTACTTGTTTATAAACTTTGAGTTTTTTTCTTCTGAAAAAAAGTTGGAAACAAATGACAACCATGTTTATTCCTATATAGAAGACAACATTTACAGGTTTTTGGTTTTCCTCACAAATTACCTTTTGTGTTAAACAGAATAAAAAATCTCATGAAGTTTGGGGCACACTTCAGAGAGAGAGTAAATAGTGTAAATTGTCATTGCTGGGCGAACTAAGTTATCCATTTAAAGCGTACACTACTCTACTAAGTGCTTTAAGCTGCTTTTGTGTTTCTATTGA[A/G]GGGAAGATGCTGGGGCAGATGGAGCCAGCCGAGCTTCAGTGCACAGTGGCGGTGGAGCGTTTGAATCCTGCAGGTCAGGCCATCAAACGGCAGCTCATCCGCAAAGGCACCGTCACATTAGGGCGTAATGAGTTTCAGGAGATGATTCTGCGCGTCCACGACGGCAAAGCTCCTCAAAACTTCATGCTGCGCGACTTCCAGCTCTTTACGCGCTTCGCAAAGGATGGCAAATGCACTGTTAAATTCATCCCGGAGAACACGCAGGTCCTGGTCTCCGATTGTCCGCCGGACCGTTTGAAGATGTTCCTGAAGACGCTCAGCATCAAGCATCAGGCGTCCCAAAGCAGCAAGCCTTTGAGTGACCGGGAGAAACTGCGAGCTGGTCTTCCTAGAGCCTTTGAGACGGTCAGTCCTCTCCAGCTGAAAGATGTAGAGAAGGCAAACGAGCTGAGGAGCAGGGTGAACGCCCCAATGCAGCCCAGATGTCTGGCAGAGAGACC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15503
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000006549 | Essential Splice Site | 480 | 639 | 9 | 13 |
The following transcripts of ENSDARG00000020289 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 16926972)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 17434508 |
GRCz11 | 2 | 17105677 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATGCTCAGAGTCCAGTGAGTCGACTGCTACAGCTRAAAGTGGGMGCTCAG[G/A]TAGGAGTTTTTTNCCACTTMAGGCAAACACTTACTCCTGATTTTAAAAGTC
Long Flanking Sequence:
TAAGAGTTTTTGGGTAGCACACATATTCTGAATGCGTTCAGCAGAATTCAAATGAGCCATTTTAATCTAGAATAATTCCAAGATTACAATGAGATTAATCTGGAAGTAATTTATCCCCACCTATAATTTTGATTCATAAAAACATGTAAATTGCACATTAGGTACTTATGTTAATTTTTAAATCTTATAAAATTATTTGTTAAACTGTCAAACATGTTCTGGTTTAATTAATGGCTTTAAATCAATTTTAAAAGATGATTACTTTCAATAAGAAAAAAAGCACACGGTCTTGTCATGTAAATGGGTGCATTTAAATGTCTATAAATGCGTTTTGTGGTGGTGATGAGTCAGTTCATTTAGACATTTCTAAGCCCTTCGGTTGTTCACTTGCAGGGGTCGTGCGGATGTATGAGGCTGTGGATAGTGACCCGATGCTGGTTCAGACAATTGATGCTCAGAGTCCAGTGAGTCGACTGCTACAGCTAAAAGTGGGAGCTCAG[G/A]TAGGAGTTTTTTCCACTTAAGGCAAACACTTACTCCTGATTTTAAAAGTCAAGTGTTGCAAGAGCTGTTTTATTTGTTTAGGTCATGCTTACTAAAAACCTTGACGTCCAGAGGGGTCTGGTAAACGGAGCCAGAGGAGTAGTGGTTGACTTTCAGCCAGGAAATCAAGGTATGACTCGCTGTATCCATAAGCTGTTGTTTCTCATGAAGGAACTGTAAACCTATTTTGGGAACCATTTAGGATGAATTTTGCTAATCTAATACATCCCATTTGTAGTAACCATTGTTGCAGTACAAATACACAAACTAGTTAAAGGTGACTCACGTTTCCATTGAGCCCTACACTACATACAGTAAAATGCATTTTTGAAAGAAACTAATGCTTTTATTCCGCAAAAGAACATGACCTTTATCTGAACTGGCTATTTTCTTTTAAATGGTCATGTTAATGCATTTTATTTGCAATTCTTAAACCCAGATTGCTAAATGACTAACTATGC
Associated Phenotype:
Not determined