Busch Lab

ZMP

ek1

Ensembl ID:
ENSDARG00000020080
ZFIN ID:
ZDB-GENE-990415-58
Description:
Ephrin type-A receptor 3 [Source:UniProtKB/Swiss-Prot;Acc:O13146]
Human Orthologue:
EPHA4
Human Description:
EPH receptor A4 [Source:HGNC Symbol;Acc:3388]
Mouse Orthologue:
Epha4
Mouse Description:
Eph receptor A4 Gene [Source:MGI Symbol;Acc:MGI:98277]

Alleles

There are 8 alleles of this gene:

Allele Name Consequence Status Availability
sa44161 Nonsense Mutation detected in F1 DNA Not yet available
sa39457 Nonsense Mutation detected in F1 DNA Not yet available
sa24519 Nonsense Available for shipment Available now
sa37911 Nonsense Available for shipment Available now
sa8869 Nonsense Mutation detected in F1 DNA Not yet available
sa8415 Nonsense Mutation detected in F1 DNA Not yet available
sa37912 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa44161
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105774 Nonsense 47 981 2 17

The following transcripts of ENSDARG00000020080 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 24 (position 28441404)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 27491991
GRCz11 24 27571150
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCCTGCTTGACTCCATGTCCGCCCCAGGTGATCTGGGTTGGGAAGCGTA[T/A]CCATCAGAGGGGGTGAGTATCAGTGAAAGTCCTCTTAACACAACCGAAAT
Long Flanking Sequence:
TTTTCATGCGCAAATCAGTGGCTGGAATTAGGCATTGTTGTTATAGATAGGTAAATTCCAGGATCTGGCATTTTCTGGGACTGGTGTCAATAAAAGCTTTTAGTGTAGAGCGATTTCAGCTCTGAAACTTCTAGTCTGAAACTATTCTTTTAGTATGATGACCTCTTAAGCTCAAGTAAAGTTGATTTCTCAATTCATGACCTCTTTAACTAGAATGAACAACCTTAAATGCAAAAAAAGTGTTGATTACCCTGTTATAAGTGGTTGTGACATTTCCAGAGCTATATTTTATTCAGAAACTATGTAGCCTTGAATGATTCATGCTTTACCTGGCGTCATGCTGTGTAAAAACCCCATTGTTGTTGGAAGAAATTATGAACAAGCTATAAAAACATTCTGTAAGCACTGTTGCTAACTCTATACCTTTTTTCTTTTCATTCTTTTACAGTTACCCTGCTTGACTCCATGTCCGCCCCAGGTGATCTGGGTTGGGAAGCGTA[T/A]CCATCAGAGGGGGTGAGTATCAGTGAAAGTCCTCTTAACACAACCGAAATACGGCCATCAGAAAAAAATTAAAAGACCTCTATGCTTGTGCCAGTTGCCCTTGGCCTTTTTCCCATTATCTTTGTCAAGATTCTAAGATGAATTGGTTTAATATGTCAGCCACTGTCCATGGTTTTCAGATATGTACTTATTCAATTGTAGTTCTGTCATTACCAATGATATTTAAGCTATTCAGCGTCTCCTGGTAGAAAGAATTTATAGTATTAAGAGTCAGTTCTGTGTAGACTGTGCATTCTGGTAGTTTCAGCAGTCAAATTCTGATGTCAAAAACAGATTTAAAAGCCTTGTGAGTTCACTATTGAACAGTGCACACTTTGTAACATCTAATGGTTGCCTCAGTGGAGTTTAAAGCTTAAATCTTTCAATTACCAGCCCAAATCTTCAATGCGTACAATTGATATTACACCCCTTTTTTAAAGTATAGTGCCTGATCTTCTTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39457
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105774 Nonsense 81 981 3 17

The following transcripts of ENSDARG00000020080 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 24 (position 28442780)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 27493367
GRCz11 24 27572526
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGAGGACTTACCAGGTATGCAACGTAATGGAAGCCAATCAGAACAACTG[G/A]TTGCGTACTGGACTGATTCAACGAGAAGGTGCTCAGCGCGTCTATGTGGA
Long Flanking Sequence:
TGCTAGTTTTTGTGCTATTATTTTAACCCACACAACCTACTGATGTCAATGCCAAACCAACAAACCAAGTCATTATTTGTGGTTTTCTTTCGCTTTTGTTGATTTTAATGTTTTAACATTTGAAAGCTTAATTACATCAATTTCTCTGCGTCAACAATGAGTTGATTTATTCATGAACAATACAACTGAGGCCATTCAGTGCGTAACTCTGAGCTGATTGCCCATCACATGCACTTTCCTATTGATGACAGTTAAATGAAGCCTTTTCTCATAATGTGCCCATCATTCATGTCAGAATCTTGTGTAAGAGGCTGAAGAGTATAGAGCCAAATCACACAAGACAATTACCAAAGAACTGCGGGATGTTTATCTCTTTGGATTGATTGACTTTCATTTGTTTATGTTCCTTAGTGGGAGGAGATTAGTGTTATGGATGAGAGGAACATACCTATGAGGACTTACCAGGTATGCAACGTAATGGAAGCCAATCAGAACAACTG[G/A]TTGCGTACTGGACTGATTCAACGAGAAGGTGCTCAGCGCGTCTATGTGGAGATCAAATTTACTCTGCGTGACTGCAACAGCCTGCCGGGAGTCCCTGGAACCTGTAAGGAGACGTTTAACGTGTACTACCACGAATCCAACAATGCAGTTGCCGCACCTTTGCGGCACATTCGTGAGAACCAGTACATCAAGATCGACACTATAGCAGCTGACGAGAGCTTCACACAGACAGACGTTGGGGATCGTGTGATGAAGTTAAACACAGAAGTACGAGATATCAGTGGCCTCAGTAAGAGAGGCTTGTATCTGGCATTTCAGGACCTTGGTGCTTGCATTGCTCTGGTGTCAGTGAGAGTCTTTTATAAACGCTGTCCGTTGGCGGTGCTCAATCTGGCTCGGTTTCCAGACACGGTGACGGGTGGTGATTCAGCGCTGGTGGAAGTGCGTGGGACTTGTGTGGAAGATGCAGAAGAGCTGGAGGGACCAAGGATGTTTTGCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24519
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105774 Nonsense 157 981 3 17

The following transcripts of ENSDARG00000020080 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 24 (position 28443006)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 27493593
GRCz11 24 27572752
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAACCAGTACATCAAGATCGACACTATAGCAGCTGACGAGAGCTTCACA[C/T]AGACAGACGTTGGGGATCGTGTGATGAAGTTAAACACAGAAGTACGAGAT
Long Flanking Sequence:
ACATGCACTTTCCTATTGATGACAGTTAAATGAAGCCTTTTCTCATAATGTGCCCATCATTCATGTCAGAATCTTGTGTAAGAGGCTGAAGAGTATAGAGCCAAATCACACAAGACAATTACCAAAGAACTGCGGGATGTTTATCTCTTTGGATTGATTGACTTTCATTTGTTTATGTTCCTTAGTGGGAGGAGATTAGTGTTATGGATGAGAGGAACATACCTATGAGGACTTACCAGGTATGCAACGTAATGGAAGCCAATCAGAACAACTGGTTGCGTACTGGACTGATTCAACGAGAAGGTGCTCAGCGCGTCTATGTGGAGATCAAATTTACTCTGCGTGACTGCAACAGCCTGCCGGGAGTCCCTGGAACCTGTAAGGAGACGTTTAACGTGTACTACCACGAATCCAACAATGCAGTTGCCGCACCTTTGCGGCACATTCGTGAGAACCAGTACATCAAGATCGACACTATAGCAGCTGACGAGAGCTTCACA[C/T]AGACAGACGTTGGGGATCGTGTGATGAAGTTAAACACAGAAGTACGAGATATCAGTGGCCTCAGTAAGAGAGGCTTGTATCTGGCATTTCAGGACCTTGGTGCTTGCATTGCTCTGGTGTCAGTGAGAGTCTTTTATAAACGCTGTCCGTTGGCGGTGCTCAATCTGGCTCGGTTTCCAGACACGGTGACGGGTGGTGATTCAGCGCTGGTGGAAGTGCGTGGGACTTGTGTGGAAGATGCAGAAGAGCTGGAGGGACCAAGGATGTTTTGCAGTGCAGATGGAGGTTGGCTGGTGCCCATCGGCCGCTGTGTTTGCAGGCCAGGTTTCGAGGAAGTGGATGGACACTGTCAACGTAAGTTATATGGATTTCACTTTCTTAAACGATTGCTTTATAGTAGCAGAATTTTTGGTCTTTAATAACTAATTTAGCGGTTTTAAATGCCAAATGTGGCCAAATTCAGATGTTCTTCATAGTTTTCCATGTTGCCATGTTGTGGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37911
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105774 Nonsense 315 981 4 17

The following transcripts of ENSDARG00000020080 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 24 (position 28477577)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 27528164
GRCz11 24 27607323
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTCTCACCAGGACAAGGCCTCTGAGTGTGTATGTGAACGAGGTTTCTAT[C/T]GAGCAGAATCAGACCCTCGCTCTATGGCCTGCACAAGTAAGCTGATACAT
Long Flanking Sequence:
TTCTACCCCTCTTTGTTTTATTTTTGAATAGTTTTTTTGTTTGCTTTTTTATTTTACAGTCTTTCAATTATATTTCTTTTTTCTCTCATTCTAGTCATCTGATTGATTGATTGTTTGTTTGTTGTCATCTATCATTAGTTCTTTGTTGTCTTTGTACAGTTGTTTAATCCATTTGGTGTATATCTATTTGTTTGTTGATCATTCTATTTAGTCGTTTAGTTTGTTTTGCATTTATCGGATATTGATTGTTTATCGTTTCCTCCATTTATCGTTCCAGCTATTATTCTGTTATTCGTCATTGTGTCTATTGTTCTGCCGATGGATCTATTGTTATATACCAAATACATAAATATAAAAATATATATTTTTCTTCTTCAACAGCATGTCGGTCAGGCTTCTACAAGGCCTCAGCTATGGATGCGTACTGTGTCAAGTGTCCTCCACACAGCTACTCTCACCAGGACAAGGCCTCTGAGTGTGTATGTGAACGAGGTTTCTAT[C/T]GAGCAGAATCAGACCCTCGCTCTATGGCCTGCACAAGTAAGCTGATACATTAATAAAGCATTAAAACCTTAAGGGTGCATTATTAGTGATGTTTAGTAAGTAAGATTATACCAATGGGGAAAAATATATGGTTGTGGAATATGTAATAGTAAACAGCCAACATGGAAATTAAAGACAATTAATAGTGAGACCTGGTCCCTATATTATTGTTACCTGCTTTACTTCTGTCATCAGGACCACCTTCAGCACCAGGTAACCCGATTTCGATGGTGAACGAGACAGCGGTGACTCTGGAATGGAGTCCTCCCCGAGACAGTGGTGGACGTGGAGATGTCAGCTATAGTGTCCACTGCAGAAAGTGCTCTGGCGAAACAGGGGCGTCAGAGAGGTGTGTTCCCTGTGGCAGCGGCGCACACTTCAACCCCAGACAGTTCGGCTTGACGCACCCCAGAGTTCTGGTCACTGAACTGCAGCCACACACCAATTACACCTTCAGCGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa8869
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105774 Nonsense 689 981 11 17
ENSDART00000105774 Nonsense 689 981 11 17

The following transcripts of ENSDARG00000020080 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 24 (position 28547973)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 27598560
GRCz11 24 27677719
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTCTGAGYGAGGCCAGCATTATGGGCCAGYTYGACCACCCTAACATCATT[C/T]GACTGGAAGGAGTTGTCACCAGATGTAAGCGTTTATATCCCAKTCACACA
Long Flanking Sequence:
CCCCTCTAAAACCAGCTTAGGCTGGTTGAAGCTGGATTTTTCAGCAAGGATTTGTTGTTTACATGATTTGGTCTGTATTCTAAATGTTTGTATCCACAGACTTGCATATTTTAACACATGGCTAGCATGTTATAGCATTTTGACAGATTAATTGTGTTTGTATAGTGTCCATTTTTTTTATTTGCCATACTGACAACATTTCTCAAGCCAACATAGCAATTTAAGAATGTGCTACAGTTGTGTTTACCATCTGAACAGCTCACCAGGCGAACGTACTGAAATAAAATGAAGGATTGGGGGGAAATTGAGTTAGCTGACAGGCTCTTGTTTTCCTATCAGGTGAGTTCGGCGAGGTCTGCAGTGGCCGTCTGCGTCTGCCCAGTAAAAGAGAGATCCAGGTGGCCATCAAGAGTCTGAAAGCTGGATATTCAGAACACCAGAGACGCGACTTTCTGAGCGAGGCCAGCATTATGGGCCAGTTCGACCACCCTAACATCATT[C/T]GACTGGAAGGAGTTGTCACCAGATGTAAGCGTTTATATCCCATTCACACATTCACAGCATGCTTCGTCTAGCACCGGAAATAGTTTGTACCCTAGTGTTTTCCACACTGAGATAATTGACCTTACAATCTTATCTTCAACAAATAACATGCATCATGAATATTCATTGGAATAAATATGTATGACAGTATTTATATCAGTGATTTTCTGCCCTACTTCTACAGAATACAAATGTGCTATGACAGAATGCCTTTGAATATGCTTTTATCGCTTTGAATTATCACGCTAGCTGGGAAGATAATGTCTTCGGAAATGTCATAGATAACACAAATGTTGGCTTAAAGAGTATGGGGGAAAAAGTTGTCACTGTTTTGTTGGACATTGTGTTATTATATTGGGTATTATTTCAGATTGTTTGAATCATCTCTGTTGAAAACAAGAAATTCATGTTTGCTGCTTTTGGTTGATAATGAAACTGCTAATATTGGTTGTCATTAGAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa8415
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105774 Nonsense 689 981 11 17
ENSDART00000105774 Nonsense 689 981 11 17

The following transcripts of ENSDARG00000020080 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 24 (position 28547973)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 27598560
GRCz11 24 27677719
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTCTGAGYGAGGCCAGCATTATGGGCCAGYTYGACCACCCTAACATCATT[C/T]GACTGGAAGGAGTTGTCACCAGATGTAAGCGTTTATATCCCAKTCACACA
Long Flanking Sequence:
CCCCTCTAAAACCAGCTTAGGCTGGTTGAAGCTGGATTTTTCAGCAAGGATTTGTTGTTTACATGATTTGGTCTGTATTCTAAATGTTTGTATCCACAGACTTGCATATTTTAACACATGGCTAGCATGTTATAGCATTTTGACAGATTAATTGTGTTTGTATAGTGTCCATTTTTTTTATTTGCCATACTGACAACATTTCTCAAGCCAACATAGCAATTTAAGAATGTGCTACAGTTGTGTTTACCATCTGAACAGCTCACCAGGCGAACGTACTGAAATAAAATGAAGGATTGGGGGGAAATTGAGTTAGCTGACAGGCTCTTGTTTTCCTATCAGGTGAGTTCGGCGAGGTCTGCAGTGGCCGTCTGCGTCTGCCCAGTAAAAGAGAGATCCAGGTGGCCATCAAGAGTCTGAAAGCTGGATATTCAGAACACCAGAGACGCGACTTTCTGAGCGAGGCCAGCATTATGGGCCAGTTCGACCACCCTAACATCATT[C/T]GACTGGAAGGAGTTGTCACCAGATGTAAGCGTTTATATCCCATTCACACATTCACAGCATGCTTCGTCTAGCACCGGAAATAGTTTGTACCCTAGTGTTTTCCACACTGAGATAATTGACCTTACAATCTTATCTTCAACAAATAACATGCATCATGAATATTCATTGGAATAAATATGTATGACAGTATTTATATCAGTGATTTTCTGCCCTACTTCTACAGAATACAAATGTGCTATGACAGAATGCCTTTGAATATGCTTTTATCGCTTTGAATTATCACGCTAGCTGGGAAGATAATGTCTTCGGAAATGTCATAGATAACACAAATGTTGGCTTAAAGAGTATGGGGGAAAAAGTTGTCACTGTTTTGTTGGACATTGTGTTATTATATTGGGTATTATTTCAGATTGTTTGAATCATCTCTGTTGAAAACAAGAAATTCATGTTTGCTGCTTTTGGTTGATAATGAAACTGCTAATATTGGTTGTCATTAGAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37912
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105774 Nonsense 815 981 14 17

The following transcripts of ENSDARG00000020080 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 24 (position 28573405)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 27623992
GRCz11 24 27703151
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGGCCATCACCTACAGGAAGTTTACCTCAGCCAGTGATGTATGGAGTTA[C/A]GGCATTGTCATGTGGGAGGTGATATCCTATGGGGAGCGACCGTACTGGGA
Long Flanking Sequence:
TATATATATATATATATATATATATATATATATATATATATATTATAGGCAAATATTTCATCATATTTCTGAGTTTGTCTCATCTTTTCTTAACAGCACAATTTAAAATAACTATAAATCTGTAAATCTTAAAATAACTGTGTAAATCCTTATTTTAGTCACATAATTAAATAATTAAAGGTTATTGTGACATTTTATGTATCACAATTTTTACTTTTTGACTTTTTTCCCTAGAAAATTTAATTATGTTGTAAGCATGCAATTCTACCACTATTTATATATAAATCGAATAAGAAAATTGCTTCACTACTGTGTAAAAAAAGATTTTTAAAAGTAGCAATGCTAACTGTACTGGTTATCGACAATAGCTTTACTATATTTGTAGTCATACTATTGTGAATGTTCTTTTTTTAATAGGGTGGAAAGATTCCCATTCGCTGGACGGCTCCAGAGGCCATCACCTACAGGAAGTTTACCTCAGCCAGTGATGTATGGAGTTA[C/A]GGCATTGTCATGTGGGAGGTGATATCCTATGGGGAGCGACCGTACTGGGAAATGTCCAATCAGGATGTAAGTCAATTCTGAATCTGAGAGATACCACACAAGTTACACAGCTAGTCACTTACAGTATTGTTTATATGGGCTAATATAGTTATTGTAATATTATATTTATTGGTCAGAGATCAGAAGATTCATTTTGTAGACTGCATTCAATACAAGTTTTGTGAAAAATTTTAAATTGTTTTAAAAATAATGTCTCGTGATTCAACATAACATATAATGTAAAGAGAAACAGATCTGGGCTTTTTTTTTTAAATATTGGTATAGCAAGAAGATATAATTGACAATAAATATATAATATTCAGGGGCAGCACTGAGAGGCTTAAATCAAGTTATCAAATATTTCATCAATTGACAAGATGTTTGTTGGTATATAAACTATTTTACACTGAAGAACAATGTAAATGGTGTTTTCTATGTTAAAAAAAGGTCTTATTTTGCTC
Associated Phenotype:
Not determined