Busch Lab

ZMP

taf7

Ensembl ID:
ENSDARG00000019572
ZFIN ID:
ZDB-GENE-020419-18
Description:
transcription initiation factor TFIID subunit 7 [Source:RefSeq peptide;Acc:NP_775367]
Human Orthologue:
TAF7
Human Description:
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa [Source:HGNC Symbol;
Mouse Orthologue:
Taf7
Mouse Description:
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor Gene [Source:MGI Symbol;Acc

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa30678 Nonsense Mutation detected in F1 DNA Not yet available
sa7395 Missense Mutation detected in F1 DNA Not yet available

Mutation Details

This allele has been removed from public view.

Allele Name:
sa2769
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000074498 Essential Splice Site 144 290 6 10
ENSDART00000128588 Essential Splice Site 144 362 6 13
ENSDART00000139397 Essential Splice Site 144 222 6 9

The following transcripts of ENSDARG00000019572 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 14 (position 42180671)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 40491996
GRCz11 14 40859250
KASP Assay ID:
554-3449.1 (used for ordering genotyping assays)
KASP Sequence:
CAAAAAGAAAGACAAGGACAAAGACAAGAAATTTGTTTGGAACCACGGCA[G/A]TAAGCAGCTTCCTCTCCTCTACTGAAATATCATCWTAATTGGTTTCAAAT
Long Flanking Sequence:
TCTGTAGTGTCTGCTTGTTGCTGGCTCTATGTGGGCGGAGTAATACACAAAGGGTAAAGAGGCTGTACGGGTGCTTATATTATTTAAATATATCACGGCTATCAGCCAATCAGATTCGAGAACCAGACAGCTATTGTGTATGTATATCTATATATCTATATATCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTTTTATTTATTTTATTTATTTAATAAACATTCAACAGTACATTAAAGAAAATGGAAAAACAAAAAGAACACATTTTTGGGAAAAAAACAACAACAAAAACAAACAGAAGTTTAATTTTCGCGTTAATTTCTCTGCTTTTGTTTTAGATGCTGGTATGCACACTAGATGGAGATCTGTACCCCCCTCTAGAGGAGCCTACAGGCACTACTGACTCCAAAAGCAAAAAGAAAGACAAGGACAAAGACAAGAAATTTGTTTGGAACCACGGCA[G/A]TAAGCAGCTTCCTCTCCTCTACTGAAATATCATCTTAATTGGTTTCAAATGAATGTAGAGACAGGCTGTCTGTACTAAATGATCCAACCCTTTTAACATCCAATTACATCTGTCTCCATTCAGTTACACTTCCTCTAAAGAACACAAGAAAGAGGCGGTTCAGGAAGACAGCGAAGAAGAAGGTAACCTCATTTGCTTTTCCTTAACTATGAGGTTTTTATTTCTGATGATTCAGCAATTCTTTATCAGTCCTAGATGGACTACAATTGTTTGCTCTTGCGGGAAAAGAGAATCGAGTTAATGGTAAAAGCTAAGATTTACATATAAATAAAGCATTCCATCTTCATTTGCCATAAAAGTATGCAGTAAAGGCTGCTCTTCTGATTGAAATGACAGCAGGCCAGTTAGCGGCTGGTTCTTCTCTCTGACTCCTGAATAAATCACCACTGCATTCCAGCTTGCTATTGACTTGGCTTCTTTTTTTAATCGCTAATGTGTTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30678
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000074498 Nonsense 174 290 8 10
ENSDART00000128588 Nonsense 174 362 8 13
ENSDART00000139397 Nonsense 174 222 8 9

The following transcripts of ENSDARG00000019572 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 14 (position 42181318)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 40492643
GRCz11 14 40859897
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCTAACCTGATTTATCCTGCAGTACATCGAGTCTCCTGATGTGGAAAAA[G/T]AGGTGAAGAGACTCTTGAGCACAGATGCAGAAGCCGTCAGCGTTCGTATC
Long Flanking Sequence:
AGAAAGAGGCGGTTCAGGAAGACAGCGAAGAAGAAGGTAACCTCATTTGCTTTTCCTTAACTATGAGGTTTTTATTTCTGATGATTCAGCAATTCTTTATCAGTCCTAGATGGACTACAATTGTTTGCTCTTGCGGGAAAAGAGAATCGAGTTAATGGTAAAAGCTAAGATTTACATATAAATAAAGCATTCCATCTTCATTTGCCATAAAAGTATGCAGTAAAGGCTGCTCTTCTGATTGAAATGACAGCAGGCCAGTTAGCGGCTGGTTCTTCTCTCTGACTCCTGAATAAATCACCACTGCATTCCAGCTTGCTATTGACTTGGCTTCTTTTTTTAATCGCTAATGTGTTCTCTGGCCTACATCCAACCTCTACTGTTAGTACTGTGTGTGCATTTGAATGCATGCGTGCATTTTTTTTTTTTTACAACGTGTTCCTTGGGGGTAAATTCTAACCTGATTTATCCTGCAGTACATCGAGTCTCCTGATGTGGAAAAA[G/T]AGGTGAAGAGACTCTTGAGCACAGATGCAGAAGCCGTCAGCGTTCGTATCCTTTAATTCTTGCTTTTGTTTCCCTCGCTGTCATGTTTTGTTGAAACTGTGTCACAACAAATCTACATGAAAATGTCATTACTAATGGATTGAGCTTTCGTTATACTTGGCCTCGCCACCAGGTGGCAGACTTGCTCACAAGTTAAGCAGAGCGATTGGGCAAGAAGCAGTCAGTTAAGCTCAGTATTACAGGAAAAGGTGGCATGAGTCACATATAAATTTGTGTAGCTCAGCAGCAGTGATACAACCACAGCAAAATGTCCTGGTGCCAAAACTGAGAGGATGAAAAGATAACAGGATTATTGAAATGAACCTTGACCCTGCGGTCAGGATGGGAGGTGATTGCTGAAGATGAATCTAAAGAACCTGACAACAGCTTATCTCTTTCCAACCTGGAGTCTTCACCCGGAACCTCTGGACACAAGGGTCATGGCTCTTCAGGTAAATGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7395
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > G
Consequence:
Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000074498 Missense 228 290 10 10
ENSDART00000128588 Missense 228 362 10 13
ENSDART00000139397 None None 222 None 9

The following transcripts of ENSDARG00000019572 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 14 (position 42184430)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 40495755
GRCz11 14 40863009
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACCCATGTAWAAAGTRTTCACACGTTTTTTTTNCCCCTAATTTAGTCCAA[C/G]ATGAYGAGCTTCGCGAGATCTTCAACGACATCAGCAGCAGCAGTGAGGAT
Long Flanking Sequence:
TGTTAATTGCGTGTCAGCATTGTTTTCGGAGGTGCAAGTCATTTATTAAATAAGTAAAAGATTGACGCAGCATCTCCTACCACAGCAAATTCCGTCTTCACTGTTGATATTTGGCACCAGTTAATCAGGAAGTCATGATTTTGGATGGAATTGCTGCTTTATTCGCACATCTGTTATGCGATATTCCAGTTTTCTGCATACATTTCATTCTTTGGATGCAAACAGCTATAGTGGTTATTAAAATCATGCTAAAAGATACTGATGCTGAAACTATTTTGATATTATTTGAAAAGTATTTTTTCATAGAAGAGTATTTTTATTATGTACTACTATTATATAAGCACAATAGCCGCCTGTTTTTTCTGTTTATTAGATGTCATGGAAAATCAGCTTTTTATTATTAATTTAATATTTGGCTTTTAGTGGGAAGTTGAGAATCCTGTACTTTGTACCCATGTATAAAGTGTTCACACGTTTTTTTTCCCCCTAATTTAGTCCAA[C/G]ATGATGAGCTTCGCGAGATCTTCAACGACATCAGCAGCAGCAGTGAGGATGAAGACGAAGAGGGCGATCGACATGATGATGAAGATCTAAACATCATGGACACTGAAGATGACATGGTCAGGCAGCTCCACGAGAAACTGAACGAGTCAGATGGAGGCAGAGATGAAAATGACCGGAACAGTCAGATCGGTAGGATGTTGCCACACTGGTTGTCTGATCAATTACAGCGCATCCTCAGCAGCTCAGACCCAACTTAAACCGCAATTCAGTATCACAGGCAGGCAGACCGGCAAACAAACAACAGCCGACCTAGATTAGCATTTGAATGATGAGTCTGCTGCAGTATTTAGGTCAGATGGGTGTACCGGTTGTCTGCTGGTGTTTCTACCCATGCTGATGAGTGACAGACGTGCCTGACCTTGGCATCAACTAGCCTTCAACGCCACACTGGCACTTAACCTGCAGAAATGAGCCATGCCGCTCAGAGCTGTGCCGTTGTG
Associated Phenotype:
Not determined