Busch Lab

ZMP

si:ch211-196o14.4

Ensembl ID:
ENSDARG00000019501
ZFIN ID:
ZDB-GENE-091112-9
Description:
im:7160157 (im:7160157), non-coding RNA [Source:RefSeq DNA;Acc:NR_023323]
Human Orthologue:
PCNXL3
Human Description:
pecanex-like 3 (Drosophila) [Source:HGNC Symbol;Acc:18760]
Mouse Orthologue:
Pcnxl3
Mouse Description:
pecanex-like 3 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:1861733]

Alleles

There are 12 alleles of this gene:

Allele Name Consequence Status Availability
sa43666 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa31058 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa37334 Nonsense Mutation detected in F1 DNA Not yet available
sa43665 Nonsense Mutation detected in F1 DNA Not yet available
sa8938 Nonsense Mutation detected in F1 DNA Not yet available
sa37333 Nonsense Mutation detected in F1 DNA Not yet available
sa43664 Nonsense Mutation detected in F1 DNA Not yet available
sa11995 Nonsense Available for shipment Available now
sa10538 Nonsense Available for shipment Available now
sa37332 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa6677 Nonsense Mutation detected in F1 DNA Not yet available
sa45739 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa43666
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031456 Essential Splice Site 51 2237 1 32
ENSDART00000133441 Essential Splice Site 51 2269 1 33
ENSDART00000031456 Essential Splice Site 51 2237 1 32
ENSDART00000133441 Essential Splice Site 51 2269 1 33
Genomic Location (Zv9):
Chromosome 21 (position 27013941)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 27582852
GRCz11 21 27619547
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTCTACCTCTGGATATTCCTCTTGGCCTTCCCCTTCCTTCTGTACATGG[T/C]GAGTTTTGCCTGAGGTAAAGAATATATAATGCAATGTATGTAATATTGAT
Long Flanking Sequence:
TTGAAAGTCGTAAAGAAACCAAACCAAGCAGTTTTGATGATTCCTCAGGATGACTCTTTTCATGTAGCCCTTGGGTCACATTTGTGCCAAAAACTCTTGATGAACTGCACTACAAACAAGGGACTGCTGGAGCAGCATGCAAACGAACAGTTGATACTGAAAAAACAAGGGCCTGAAGTTATTCGCTATTGTTTCGCACTCTGCTAATTTTTTTTCTTTGGACAGTCTTTTCATTATTTCCAGTGTGAGAAAGTCCATCCCTGAGGTTCTAGATGGAAGTAACGCACTAGAAAGTTTGACAGGGGAACTTGGAGAACTCTGGGTTGTCTCATCCAGAAGCGATAAGATGGGCTCTCAGGCTCTTCAGATATTGCGGCAGGGAGTGTGGGCCTCTCTGACCGGAGGATGGTACGTGGACCCTCATCAGAGTACCTTCTCAAACTGCTTTCATCTCTACCTCTGGATATTCCTCTTGGCCTTCCCCTTCCTTCTGTACATGG[T/C]GAGTTTTGCCTGAGGTAAAGAATATATAATGCAATGTATGTAATATTGATGTAATCCAGGAGCTTGAGCAGTAACCTTCCTTACTGGCTGCAGATTTACTCTCGAAAGTAGGGCTGAGTAGACATTTTTCTAAGTGTGTGTGTGTTTTTCTGTCATCTATGCTAAAAAGCCATTAAACGGTCTACTTTCCATGTTTTACATTCTACGTTCTGACCATTCATTGAATGTTTTTTAGAGACGTGGATTTTATTTTGATATACCAGGTCTGTGATTCCTGAATTCTATTTATTAAGTCACCATTTGTAAAGTGATATTCACAATTAGTTTTTTTACAAATCAGCGTTCATATTAAATATCCATTTACTCAAATTAGGATATAAGAATAAAGAATTTAATTCAATTCAAGGTACACGGGCGATGTTGGTGTGATCTGATTTTATTTACTAATGAGCAATTCCATACAAATGTCCAAAAAAAAAAAAAATCACCAAATTAGTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31058
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031456 Essential Splice Site 51 2237 1 32
ENSDART00000133441 Essential Splice Site 51 2269 1 33
ENSDART00000031456 Essential Splice Site 51 2237 1 32
ENSDART00000133441 Essential Splice Site 51 2269 1 33
Genomic Location (Zv9):
Chromosome 21 (position 27013941)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 27582852
GRCz11 21 27619547
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTCTACCTCTGGATATTCCTCTTGGCCTTCCCCTTCCTTCTGTACATGG[T/C]GAGTTTTGCCTGAGGTAAAGAATATATAATGCAATGTATGTAATATTGAT
Long Flanking Sequence:
TTGAAAGTCGTAAAGAAACCAAACCAAGCAGTTTTGATGATTCCTCAGGATGACTCTTTTCATGTAGCCCTTGGGTCACATTTGTGCCAAAAACTCTTGATGAACTGCACTACAAACAAGGGACTGCTGGAGCAGCATGCAAACGAACAGTTGATACTGAAAAAACAAGGGCCTGAAGTTATTCGCTATTGTTTCGCACTCTGCTAATTTTTTTTCTTTGGACAGTCTTTTCATTATTTCCAGTGTGAGAAAGTCCATCCCTGAGGTTCTAGATGGAAGTAACGCACTAGAAAGTTTGACAGGGGAACTTGGAGAACTCTGGGTTGTCTCATCCAGAAGCGATAAGATGGGCTCTCAGGCTCTTCAGATATTGCGGCAGGGAGTGTGGGCCTCTCTGACCGGAGGATGGTACGTGGACCCTCATCAGAGTACCTTCTCAAACTGCTTTCATCTCTACCTCTGGATATTCCTCTTGGCCTTCCCCTTCCTTCTGTACATGG[T/C]GAGTTTTGCCTGAGGTAAAGAATATATAATGCAATGTATGTAATATTGATGTAATCCAGGAGCTTGAGCAGTAACCTTCCTTACTGGCTGCAGATTTACTCTCGAAAGTAGGGCTGAGTAGACATTTTTCTAAGTGTGTGTGTGTTTTTCTGTCATCTATGCTAAAAAGCCATTAAACGGTCTACTTTCCATGTTTTACATTCTACGTTCTGACCATTCATTGAATGTTTTTTAGAGACGTGGATTTTATTTTGATATACCAGGTCTGTGATTCCTGAATTCTATTTATTAAGTCACCATTTGTAAAGTGATATTCACAATTAGTTTTTTTACAAATCAGCGTTCATATTAAATATCCATTTACTCAAATTAGGATATAAGAATAAAGAATTTAATTCAATTCAAGGTACACGGGCGATGTTGGTGTGATCTGATTTTATTTACTAATGAGCAATTCCATACAAATGTCCAAAAAAAAAAAAAATCACCAAATTAGTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37334
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031456 Nonsense 163 2237 4 32
ENSDART00000133441 Nonsense 163 2269 4 33
Genomic Location (Zv9):
Chromosome 21 (position 27011111)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 27580022
GRCz11 21 27616717
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACTCTGACTCTTATCTTTTTCTTTTCCTCAGGAGTTTTTACCACAGCTT[G/T]AAGATCCCGGAGGTTCAAAGGGTACATTGTTGTGGTTATTGTTGCTTTTT
Long Flanking Sequence:
GATTGTGGAGAAGAGGCAGGCCTCGTTCACAACAGACCCAAACAGAGTGGAAGAAGGAGAGGAAGGCTCTGGCGCTCATGACGGAAGCCAGCACAGGTGCTGTGCATCTCCTTTACTACACTCTGCTGTCAAAATTTTGTGTTGTCATTTTTCTCTCTCAAGTCAGCCAGTGACAGACTTGAGACATTCAGATGTTCTTTGGGGATTTGTTGTTGTGAACAGCTGTTGTTGGTGTTGAGCAGTTACTCCACTGTAGTCAGTTTAAACTCATGTTGGCATGCCTGTGCCTACAGGGACAGTGGTGTCGGTGTGGAAATGACAGTGTTCCGAAAGGTAAACTCTACGCCTCCTGTACGTTGCAGTTCGCAGCATTCACTGTTTGGACTGAACCAGGTGTCGGTAAGGAGATTCTTAATGCCAAATATCACCTGTCTTTATTTCTTAGGGATTTACTCTGACTCTTATCTTTTTCTTTTCCTCAGGAGTTTTTACCACAGCTT[G/T]AAGATCCCGGAGGTTCAAAGGGTACATTGTTGTGGTTATTGTTGCTTTTTAATGACAGAACCAGATAGTTTCAGTTAAGATGAACTAGTATTCCTGTACTTTTCCTCATATAAATATGATTTTCAAAATTACAGATTTTAAGGAACTCATACAGGAGCAGGGCAGTAATAATGTGATTGTGACTTCTGCACATAGAGATGTCCTTCGACACAACTCTCGGGACAACACTAGTATGGACAATCCCTTCACTTCTGCACAGCTTTAGCAATTCATAGAATAGATATCCAATACAGAGTGCAACAGTGGCCAACCTCTTTTTCTTTTTTTTGTTATTGTTCTTTTTCAGAAAAATCTAATTTTAGGTCAACAAAAACGAAAATTCACATTTTATCTTTTTTCATAATACATACATCAATCTTTAATGAAACGATTGATTCATGCTTTTACATTTTTAACATTTCATGACCAGTTTGACATAAAAGGAAAATCTCAAACTGTTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43665
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031456 Nonsense 232 2237 5 32
ENSDART00000133441 Nonsense 264 2269 6 33
Genomic Location (Zv9):
Chromosome 21 (position 27009973)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 27578884
GRCz11 21 27615579
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGATGAGAAGGACCTAGTGGACAATGGGGGTACAGATCAACTATCTCAG[C/T]AGAGCCCTGGTGTGGAGGGTTTAGGAGGCTACTCTCCCCTGGGACCTTCG
Long Flanking Sequence:
CAGCTAAACCAGCCAGTTCTGAGTTTAGTCACAATACAACAAACTGTCATTTGAAACTAGATAAAGATGTTGTAAGAGATGTAAGACTGTACTTCTATGAGCTAAATTTTATGAATTGTGTCTGTTGAAATCAAATAAAAAACAACTAGTTTTTATTAAAGAGTATAAAAATGAATGTTTATTCCCAAGGCTAAAAGTGAATTTATAATATTGACTTGAATAAATTACTGATTTGAACTAGTGCCAATTGTTCTGCATATACATCTAGAAGTCTACTGTGCTCAGCAGTAATTGGATGCTTTTTTGTCATTGCAGTTCTTGCACCATCTTGCTTGGCTGGGGATTACAGAGGGCTAATTGGTGTAGGGGATGTAATGTCAGGAGGCTTCAGTAATCTACACCCAACAAACTGTCCTTCCATCCCACCATCCCCTTCCAGCCAGGAAGATGGAGATGAGAAGGACCTAGTGGACAATGGGGGTACAGATCAACTATCTCAG[C/T]AGAGCCCTGGTGTGGAGGGTTTAGGAGGCTACTCTCCCCTGGGACCTTCGGCAGAATCTGAGAGCCTGGGAGATGCTCCTCTCAGCCCACTCATCAAGAGTAGCTTGAGTGAGGAGCTGAGTGAGAACTTGTTGGGTTTAGGCCTAGATCCAGTCACTTTTGCCCCTGGTGCCGAGCACCCAGGCAGCCGCACTGGGGTGGCATTAGCTGCAGGCTCTACTGACAGCTGCTTTAGCGGAGGTGGAGCAACCACAGACAGAGAGACTCTGAGTACAGTTAGTAGCTACCGGAGCGAGAAAACAGACTCAACCCAGCTTGAGAGCCCCTCACTGGGCCAAACACATAAACCCGTGTCTAATGCTGATCCTGCAGCTTTGCCTCAGGGCAAAGGCCCCTATCAGCAGCCTGGAGATGTGCTGCAGGGTGGAAGTGACACAGATGACTTGTCAGACAGCGTGCTGCTACGCTCGCCCTCCAAAGAGCTTTCATCTGGGCAGGGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa8938
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031456 Nonsense 239 2237 5 32
ENSDART00000133441 Nonsense 271 2269 6 33
Genomic Location (Zv9):
Chromosome 21 (position 27009951)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 27578862
GRCz11 21 27615557
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAATRGGGGTRCAGATCARCTATCTCAGCAGAGCCCTGGTGTGGAGGGTT[T/A]AGGAGGCTACTCTCCCCTGGGACCTTCGGCAGAATCTGAGAGCCTGGGAG
Long Flanking Sequence:
GTTTAGTCACAATACAACAAACTGTCATTTGAAACTAGATAAAGATGTTGTAAGAGATGTAAGACTGTACTTCTATGAGCTAAATTTTATGAATTGTGTCTGTTGAAATCAAATAAAAAACAACTAGTTTTTATTAAAGAGTATAAAAATGAATGTTTATTCCCAAGGCTAAAAGTGAATTTATAATATTGACTTGAATAAATTACTGATTTGAACTAGTGCCAATTGTTCTGCATATACATCTAGAAGTCTACTGTGCTCAGCAGTAATTGGATGCTTTTTTGTCATTGCAGTTCTTGCACCATCTTGCTTGGCTGGGGATTACAGAGGGCTAATTGGTGTAGGGGATGTAATGTCAGGAGGCTTCAGTAATCTACACCCAACAAACTGTCCTTCCATCCCACCATCCCCTTCCAGCCAGGAAGATGGAGATGAGAAGGACCTAGTGGACAATGGGGGTACAGATCAACTATCTCAGCAGAGCCCTGGTGTGGAGGGTT[T/A]AGGAGGCTACTCTCCCCTGGGACCTTCGGCAGAATCTGAGAGCCTGGGAGATGCTCCTCTCAGCCCACTCATCAAGAGTAGCTTGAGTGAGGAGCTGAGTGAGAACTTGTTGGGTTTAGGCCTAGATCCAGTCACTTTTGCCCCTGGTGCCGAGCACCCAGGCAGCCGCACTGGGGTGGCATTAGCTGCAGGCTCTACTGACAGCTGCTTTAGCGGAGGTGGAGCAACCACAGACAGAGAGACTCTGAGTACAGTTAGTAGCTACCGGAGCGAGAAAACAGACTCAACCCAGCTTGAGAGCCCCTCACTGGGCCAAACACATAAACCCGTGTCTAATGCTGATCCTGCAGCTTTGCCTCAGGGCAAAGGCCCCTATCAGCAGCCTGGAGATGTGCTGCAGGGTGGAAGTGACACAGATGACTTGTCAGACAGCGTGCTGCTACGCTCGCCCTCCAAAGAGCTTTCATCTGGGCAGGGCCTGGACAGAACTCTAGTGGAGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37333
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031456 Nonsense 364 2237 5 32
ENSDART00000133441 Nonsense 396 2269 6 33
Genomic Location (Zv9):
Chromosome 21 (position 27009575)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 27578486
GRCz11 21 27615181
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCGTGTCTAATGCTGATCCTGCAGCTTTGCCTCAGGGCAAAGGCCCCTA[T/A]CAGCAGCCTGGAGATGTGCTGCAGGGTGGAAGTGACACAGATGACTTGTC
Long Flanking Sequence:
CACCCAACAAACTGTCCTTCCATCCCACCATCCCCTTCCAGCCAGGAAGATGGAGATGAGAAGGACCTAGTGGACAATGGGGGTACAGATCAACTATCTCAGCAGAGCCCTGGTGTGGAGGGTTTAGGAGGCTACTCTCCCCTGGGACCTTCGGCAGAATCTGAGAGCCTGGGAGATGCTCCTCTCAGCCCACTCATCAAGAGTAGCTTGAGTGAGGAGCTGAGTGAGAACTTGTTGGGTTTAGGCCTAGATCCAGTCACTTTTGCCCCTGGTGCCGAGCACCCAGGCAGCCGCACTGGGGTGGCATTAGCTGCAGGCTCTACTGACAGCTGCTTTAGCGGAGGTGGAGCAACCACAGACAGAGAGACTCTGAGTACAGTTAGTAGCTACCGGAGCGAGAAAACAGACTCAACCCAGCTTGAGAGCCCCTCACTGGGCCAAACACATAAACCCGTGTCTAATGCTGATCCTGCAGCTTTGCCTCAGGGCAAAGGCCCCTA[T/A]CAGCAGCCTGGAGATGTGCTGCAGGGTGGAAGTGACACAGATGACTTGTCAGACAGCGTGCTGCTACGCTCGCCCTCCAAAGAGCTTTCATCTGGGCAGGGCCTGGACAGAACTCTAGTGGAGGGGGAGGATCTTCCCCCTTTGCCTACAGACATTACACAGCCCTCATTGCAGGACTCTTCACCATCTAGCAGTGGTCCCTCTGAGACCTGCGATCTTGACAGTGGTATCCCTATCCCCCCTCTTCCTCCTCCACGCCAGGCCAGCTCTGTACCATCAGGTTTGGCACTGGGCTTGGTCTGCTCAGAGCCTGCTCTGCCAGTCTCTGCCCCGTCCTACCTCCTAGCAGAGCCTCCCTCTCTACAAGCACAGCAGCAAGTGGTGCGACCGAAAGATCTGAAGCTGCTACGGGCCGGGGGCAGTGTAGGTCACCGGCCAGGTCGCAGGAAAGCTCCCCGCAAACGCGGTGCTGCTGGTAGTAGCAGTTTTGACTGTGGCTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43664
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031456 Nonsense 488 2237 5 32
ENSDART00000133441 Nonsense 520 2269 6 33
Genomic Location (Zv9):
Chromosome 21 (position 27009205)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 27578116
GRCz11 21 27614811
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGTCTCTGCCCCGTCCTACCTCCTAGCAGAGCCTCCCTCTCTACAAGCA[C/T]AGCAGCAAGTGGTGCGACCGAAAGATCTGAAGCTGCTACGGGCCGGGGGC
Long Flanking Sequence:
TGAGTACAGTTAGTAGCTACCGGAGCGAGAAAACAGACTCAACCCAGCTTGAGAGCCCCTCACTGGGCCAAACACATAAACCCGTGTCTAATGCTGATCCTGCAGCTTTGCCTCAGGGCAAAGGCCCCTATCAGCAGCCTGGAGATGTGCTGCAGGGTGGAAGTGACACAGATGACTTGTCAGACAGCGTGCTGCTACGCTCGCCCTCCAAAGAGCTTTCATCTGGGCAGGGCCTGGACAGAACTCTAGTGGAGGGGGAGGATCTTCCCCCTTTGCCTACAGACATTACACAGCCCTCATTGCAGGACTCTTCACCATCTAGCAGTGGTCCCTCTGAGACCTGCGATCTTGACAGTGGTATCCCTATCCCCCCTCTTCCTCCTCCACGCCAGGCCAGCTCTGTACCATCAGGTTTGGCACTGGGCTTGGTCTGCTCAGAGCCTGCTCTGCCAGTCTCTGCCCCGTCCTACCTCCTAGCAGAGCCTCCCTCTCTACAAGCA[C/T]AGCAGCAAGTGGTGCGACCGAAAGATCTGAAGCTGCTACGGGCCGGGGGCAGTGTAGGTCACCGGCCAGGTCGCAGGAAAGCTCCCCGCAAACGCGGTGCTGCTGGTAGTAGCAGTTTTGACTGTGGCTCTTACCGCCGGCATCACAACCGTGGCCAACACAGAGACTACATCCCTGTACGCAGTCGGCTGGGTGCCAAAGCCTACAGCGAGAGCTTGTTTGAGGACTCCAGTGACGAAGATGATGGCAGCGACATAAGTGCAGGATCTAGCCTGGGATCCCAACGTCACTTCAGCTCTGACGATGAAGACGACGATGAAGATGATGACTCGAGCTCCTCTACCTCCTGCTACTCTCCCGATCTGGCCAATGCTGGCATCTCTTCTCAACCTGGCCCCCCTCAGCTGCCAAGCCCTGGAGAAGGAGAGGAGCCTGACACAGTAGGACCCTCCCATGCTCGCAGTGCTCAGCGCTCAGCCAGCACAGCTAGTGCCAAGACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11995
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031456 Nonsense 766 2237 6 32
ENSDART00000133441 Nonsense 798 2269 7 33
Genomic Location (Zv9):
Chromosome 21 (position 27008188)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 27577099
GRCz11 21 27613794
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCAAGCATGACTCTGTTAGCAGTGTAAAGAGGACTCAGGCCATTCGAAGG[C/T]GACACAATGCTGGTAGTAACCCCACCCCACCCCCTTCYGCCATGGGCTCT
Long Flanking Sequence:
GCATGGATGGTGCAGGTGCAGGTTCCAACAACACAGGAACTCTTGCATCTACTATGATACCTTTAGCCCCTTCTTCTACTCCCGCCCCGCGTCCACTCACCATCTCTAAATCAGACCTGGAGGCTCGGACAATGCACTCAGAAGGCTTTTCCAGGGCACACCATAGGCTTGACTCACTTGGTGGCTCCTGGGCTGGGAACCAGACAGGCTGGAGGGCAGGAGAGCTGCTGGAAGAGGGAGCAGTAGGAGGAGGTGAGGAGTGAACAGATTTAGATTCTCAATATTTTTGTAATTGTGTAATTCATGTGATTCTGCTGTAGAATGTTTTTTTTTTTTTTTTTTTTGTTAGACCTTCATCATACCAGGCTAAATTCACCACAACATTCATCCTGAAAAATTCCCAACCTTGACAATCTGCTTGTTTTGCCTGTGTAGCCCCAGATGACGGAAGCAAGCATGACTCTGTTAGCAGTGTAAAGAGGACTCAGGCCATTCGAAGG[C/T]GACACAATGCTGGTAGTAACCCCACCCCACCCCCTTCCGCCATGGGCTCTCCTCCTAGCCTTCAGGACCTCCAGAGAGTCCGCACTTCCTCTCACTCTCGCACACGAACGCTCCCCTCTGCTCTGCACTTTGCTGCCTCCTCTCTGCTTCTACTACCCCGCAGTGGAGTTCACGAGGCTTCCACCTTTGATGACACCTCAGAGGGAGCTGTACACTACTTTTTTGATGAGAGCGGTAATTACTCACTTGTGCTATATATTTTTTGTAATGCAAATTTAATTTCTGGTTTAGTTGTTGTTTTGTTTAATATAAATGATTTAATTTTAGGGGTAAAGAGGTCTTATACTTTTGGGCCTGCTGGTGGAGGATATGAGGACCCGGTCCAGTAAGTGTTAACTTGTACATTTAGAGTAATACTTAGCATTTGCCCATTGTTTGACAACTTTTCATTTCCTCAGGGAGCGAGAGCGACAGTCACAGTCCTCCAGCTTTACGTCCAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10538
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031456 Nonsense 1315 2237 18 32
ENSDART00000133441 Nonsense 1347 2269 19 33
Genomic Location (Zv9):
Chromosome 21 (position 27004351)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 27573262
GRCz11 21 27609957
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCTTTCTGTGTCTCAGATGCTGCTCAGCTCATGTGGTTTGAGAAGCTGTA[C/A]GCTTGGCTGCAGTGTGTGGAGAAGTATTTCATCTATCCGGCTGTAGTGCT
Long Flanking Sequence:
TTAAAAAATGGTCAAACTCTACTCTTTCACTTTAGGTGGCTTGTAGAATGAGCCTATTTTCAAAAAAAGGTGCAGGTTTTTTTTTTTAAGTATTAAACATCATTTCTATCTTTTTGAATAGAAGTGGAAATCTGGTTAATCGTAGCAAATGTGTTAATTCTGGTTGATTTGTTTTCTTCAACAAGTTTTTTTTAATTATTTAATTTCTTTTAATCTGTGGTTTCTTCACACCATTTCAGCCTGCTCTCAGTTTCGTCCTTTACATTTTGGCTGGGGTGGTGGGTTTTTTCACGCATTACCTTCTGCCTCAGCTGCGCAAACAGCTGCCTTGGTTCTGCTTGGCCCACCCTGTGTTGCGCTCTCGAGAATACAGCCAGTTTGAGGTCCGAGGTGAGCAGTCAAACCTACACTCACAAATGAATGTCTGAACAAGTGCGACGGACTGATCTCTCTTTCTGTGTCTCAGATGCTGCTCAGCTCATGTGGTTTGAGAAGCTGTA[C/A]GCTTGGCTGCAGTGTGTGGAGAAGTATTTCATCTATCCGGCTGTAGTGCTTAATTCCCTCACCACTGAAGCTCACACTGTCAGCCAAAACCCTGACAAACCTGGAGCCTAGTAAGAACAAGAACAAGAACATCCAGAAATCTCAAGATTTCTCTGAGCCCTAGTGTAGAGTAAAGCTCAACACTAGCTGATGTTGCACTTTTGTTTGGGATTTTAAATCTCAGCTTTTCACACTTAGATAATGATGATATCTTTTATCCGTTTTTTTTTAGTGGCCGTGCTTTGTTTATCTCGGTGGCTGGGATGAAGCTGCTTCGTTCATCATTCTGTGTCCCGTCCCACCAGTACGTCACTCTGTGCTTCACCGCCCTCTTCTTTCAGTTCGACTACCCGCACTTTTCACAGACCTTCCTCGTCGACTATTACTGCATGTCCATCCTCTTCAGCAAGGTCTGTGTATACGTCAACATTTCTGGTGCCACAAATTCAACATTTGTTGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37332
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031456 Essential Splice Site 1667 2237 24 32
ENSDART00000133441 Essential Splice Site 1699 2269 25 33
Genomic Location (Zv9):
Chromosome 21 (position 26981382)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 27550293
GRCz11 21 27586988
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCTTCAAGTGTTCGACCTACGCAAGATCCTCATCACATATTATGTCAAG[G/A]TCAGTTTCACTCAGACAAAAACAACTTAAATGAAAGGACTGCTGTCTGAG
Long Flanking Sequence:
TAAAGATTTCTAATTATAACATGAACCAAAAAAAGTACCCTCATATTTGCGTGTGATTTTTAGTACGGCTATAGTAGAACTACAGTAACCAAATGACCTTTTAGTAAACCATTCATTCATTATAAACCCTTTTTTTGTTATTAAAACCTTTTGTGGAATAATAAAGTTTGTGACAATTTTGGTAATTAGTTTGCAGTCTATGCGTTTTCATCTTTATTTTCTTTTTTTGAATGACTGTGTTTTCAGGAACATATTGTCAGCAGAGGGAGGTGGAGGCAATCACAGAAGGGGTGGAGGAAGATGAAGGCTGCTGCTGTTGTGAGCCAGGTCATCTCCCCCACATGCTCTCCTTTAACGCAGCTTTTGGTCAGCGCTGGTTGGCTTGGGAAGTGGCCGCCACCAAATATGTGCTAGAGGGCTACAGCATCAGCGACAACAACGCAGCCTCCATGCTTCAAGTGTTCGACCTACGCAAGATCCTCATCACATATTATGTCAAG[G/A]TCAGTTTCACTCAGACAAAAACAACTTAAATGAAAGGACTGCTGTCTGAGATGCAGAGTAATGATCAAAGTCTGTCCTCCTCAGAGTATCATCTACTATGTGAGCCGCTCGTCCAAACTGGAGGAATGGTTAGCCAACGAAACGGTGCAGGAAGCGCTACGGCCCTGCCTCAACCCTGCCTATGTGGACAGCGATCCCACCTTCAACTTAAACATAGATGAAGACTATGACCACCGAGCTTCTGGCATTACTCCCTCTTCCTTCTGTCTGGTGTACTTGGAGTGGATCAAATACTGCAACAGCCGCAGACAAACGGTACTTTAAAAATGATTTTGCTATTGACAGACACTAGCTTGGTTGCATGGGAATTAAATATGTGATTTAGTGCTTTTTTGTTTATTTTCTTTCTTTGCAGCCAGTTGAGAGTGAGAAGGATTCGCCTCTGGTCACACTGTGTTTTGGGTTGTGTATTCTGGGCCGTCGAGCTCTGGGTACCGCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6677
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031456 Nonsense 1676 2237 25 32
ENSDART00000133441 Nonsense 1708 2269 26 33
Genomic Location (Zv9):
Chromosome 21 (position 26981272)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 27550183
GRCz11 21 27586878
KASP Assay ID:
554-5254.1 (used for ordering genotyping assays)
KASP Sequence:
AATGATCAAAGTCTGTCCTCCTCAGAGTATCATCTACTATGTGAGCCGCT[C/A]GYCCAAACTGGAGGAATGGTTAGCCAACGAAACGGTGCAGGAAGCGCTAC
Long Flanking Sequence:
ATTCATTCATTATAAACCCTTTTTTTGTTATTAAAACCTTTTGTGGAATAATAAAGTTTGTGACAATTTTGGTAATTAGTTTGCAGTCTATGCGTTTTCATCTTTATTTTCTTTTTTTGAATGACTGTGTTTTCAGGAACATATTGTCAGCAGAGGGAGGTGGAGGCAATCACAGAAGGGGTGGAGGAAGATGAAGGCTGCTGCTGTTGTGAGCCAGGTCATCTCCCCCACATGCTCTCCTTTAACGCAGCTTTTGGTCAGCGCTGGTTGGCTTGGGAAGTGGCCGCCACCAAATATGTGCTAGAGGGCTACAGCATCAGCGACAACAACGCAGCCTCCATGCTTCAAGTGTTCGACCTACGCAAGATCCTCATCACATATTATGTCAAGGTCAGTTTCACTCAGACAAAAACAACTTAAATGAAAGGACTGCTGTCTGAGATGCAGAGTAATGATCAAAGTCTGTCCTCCTCAGAGTATCATCTACTATGTGAGCCGCT[C/A]GTCCAAACTGGAGGAATGGTTAGCCAACGAAACGGTGCAGGAAGCGCTACGGCCCTGCCTCAACCCTGCCTATGTGGACAGCGATCCCACCTTCAACTTAAACATAGATGAAGACTATGACCACCGAGCTTCTGGCATTACTCCCTCTTCCTTCTGTCTGGTGTACTTGGAGTGGATCAAATACTGCAACAGCCGCAGACAAACGGTACTTTAAAAATGATTTTGCTATTGACAGACACTAGCTTGGTTGCATGGGAATTAAATATGTGATTTAGTGCTTTTTTGTTTATTTTCTTTCTTTGCAGCCAGTTGAGAGTGAGAAGGATTCGCCTCTGGTCACACTGTGTTTTGGGTTGTGTATTCTGGGCCGTCGAGCTCTGGGTACCGCATCTCACAGCATGTCTGCCAGGCAAGTGTTTAAACCAATTACAGCAATTTTGCATAAGCTGACAAGTTTTTTTTTTGTTTTTTTAAATGCCTTTTGCACCTTTCACGCATCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45739
Status:
Mutation detected in F1 DNA
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Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000031456 Essential Splice Site 1745 2237 26 32
ENSDART00000133441 Essential Splice Site 1777 2269 27 33
Genomic Location (Zv9):
Chromosome 21 (position 26980967)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 27549878
GRCz11 21 27586573
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGAATTAAATATGTGATTTAGTGCTTTTTTGTTTATTTTCTTTCTTTGCA[G/T]CCAGTTGAGAGTGAGAAGGATTCGCCTCTGGTCACACTGTGTTTTGGGTT
Long Flanking Sequence:
GGGCTACAGCATCAGCGACAACAACGCAGCCTCCATGCTTCAAGTGTTCGACCTACGCAAGATCCTCATCACATATTATGTCAAGGTCAGTTTCACTCAGACAAAAACAACTTAAATGAAAGGACTGCTGTCTGAGATGCAGAGTAATGATCAAAGTCTGTCCTCCTCAGAGTATCATCTACTATGTGAGCCGCTCGTCCAAACTGGAGGAATGGTTAGCCAACGAAACGGTGCAGGAAGCGCTACGGCCCTGCCTCAACCCTGCCTATGTGGACAGCGATCCCACCTTCAACTTAAACATAGATGAAGACTATGACCACCGAGCTTCTGGCATTACTCCCTCTTCCTTCTGTCTGGTGTACTTGGAGTGGATCAAATACTGCAACAGCCGCAGACAAACGGTACTTTAAAAATGATTTTGCTATTGACAGACACTAGCTTGGTTGCATGGGAATTAAATATGTGATTTAGTGCTTTTTTGTTTATTTTCTTTCTTTGCA[G/T]CCAGTTGAGAGTGAGAAGGATTCGCCTCTGGTCACACTGTGTTTTGGGTTGTGTATTCTGGGCCGTCGAGCTCTGGGTACCGCATCTCACAGCATGTCTGCCAGGCAAGTGTTTAAACCAATTACAGCAATTTTGCATAAGCTGACAAGTTTTTTTTTTGTTTTTTTAAATGCCTTTTGCACCTTTCACGCATCCAGCAATTTTACAGAATGATGTTTGTAGCGCTGCTTCATGTCCTAACTAGCAAAAGCTTTTTATAAGCTGACAGCAAGTGTCTTGGGTGACTTGGGATGGTTGGTTTAATAAAAAAAATATATCTGATTTTTTTTTTCCTAATAAAAAAGTTATTATATAGATGTATTATACAGCAAAGGGAATTGCACCAGAGATTTGGCCATTAGTCGCAGACAGGAAGATAGTGTGCATATGTGAACAATATCATGCGAGTAGCTGTGTAATTTAGCTGTACATTGGCTGTGAACACAACCATATTGCACTGC
Associated Phenotype:
Not determined