ZMP
tmem39b
Ensembl ID:
ZFIN ID:
Description:
Transmembrane protein 39B [Source:UniProtKB/Swiss-Prot;Acc:Q7ZW11]
Human Orthologue:
TMEM39B
Human Description:
transmembrane protein 39B [Source:HGNC Symbol;Acc:25510]
Mouse Orthologue:
Tmem39b
Mouse Description:
transmembrane protein 39b Gene [Source:MGI Symbol;Acc:MGI:2682939]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa6317 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa38955 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa6317
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000002095 | Nonsense | 176 | 491 | 5 | 9 |
Genomic Location (Zv9):
Chromosome 13 (position 33496713)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 33142661 |
| GRCz11 | 13 | 33273111 |
KASP Assay ID:
554-4506.1 (used for ordering genotyping assays)
KASP Sequence:
CTGGTGACGGCTCGTTTTGCMGTGCTGACTCTTGCAGGATGGAGTYTGTG[T/A]CGTTCACTTATTTAWCTCTTCAAGACGTATTCTGTGCTCAGCCTGCTCTT
Long Flanking Sequence:
AAGCACTGCAAGATTCCAGAACTCTCCATGGACAAGAACGTCCTGTTTGAGCTCCACCTGTTTGCGTGCCATCTTATAGCTCTGTTTGTGCATTATGTCAACATCTACAAAACCGTGTGGTGGTACCCTCCCTCACACCCACCTTCACACACCTCTCTGGTGAGATGCATGTCTAACAGTTTAACTCCATGAATGTATTTGATCTTCATTTTTGTTAATAATAAAAAAATTTTGTCTCTGCAGAACTTTCACCTCATTGATTATAATATGCTGGTGTTCACCGTCATAGTGCTGGCACGCAGGCTAATTGCTGCCATTGTAAAAGAGGTAGTGTACATCATCTGCTTTTCTCTGAATGCTTTTAAAAAGGATTGAGTGGTGCAACATTTCTTTTTCTTTGTTCCGAAGGCATCACAAAGTGGGAAGTTGTCCTTCCCGCACTCTGTCTTCCTGGTGACGGCTCGTTTTGCCGTGCTGACTCTTGCAGGATGGAGTCTGTG[T/A]CGTTCACTTATTTATCTCTTCAAGACGTATTCTGTGCTCAGCCTGCTCTTCCTCTGCTATCCGTAAGTAATAATCCACACATCTGCTGGTTGTAATTCTGATGTGTTAAGATGCTGTCACAATTGCATGCTTAATTTAGCCATATTTCTCAGGTGAAATCCAGTCTTATCAAGAATTCATGCTATTCGTCAAGCCAAATTTTAATCTTGCTTTGTCTAAAAATTTGAAATGATTTTTAAGCTGTAAGTTTGCAGGACTTTTAAGCTCTTCAATAAGACTGCCAGAGGGAAATATCCTTAGAATGATGGGTCAAAGGATGAATGGATGGATAAACAGACCTATGGATATTATATATGCAGCGATGCACGAATTGTTTTCAGCCTGGTTTATAAAAGAGCATCTGAGGATATTTGATTTGATGCTCACGCTGAATGTTATTTGAGCCACTGAATTTAATCAAAGCCTGCGGGAAGCACTTTAGCCAAAAAAAAAAATGGTGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38955
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000002095 | Nonsense | 215 | 491 | 6 | 9 |
Genomic Location (Zv9):
Chromosome 13 (position 33499630)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 33145578 |
| GRCz11 | 13 | 33276028 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGGAATGTACATCCCGTTCTTCCGCCTCAGCTGTGATTTCCGCAGAGCT[G/T]GATCTATGTCTCCATTAAGTGGCATTGGTTCTAAAGATGTGGGTGCGGCT
Long Flanking Sequence:
GGTCATGTGAATGGATAGACAGAAAGATAGATGGATGAATTGATAGATAGCCTGAGCTCTGTTTGGTTGTTTTTTGCTGTTTACTTTAAAATTTGGACTCTTAACTAGGGTTTTCTTGGTGGTTGCTAGGGTTGTTTGGCATTTTGCTTGGTGTTGTTAAGGTTTTCTGGCCGGTGTTCTGACTGGTTGTAGTTGATGGTTATGTCTTCCTTTTATTTAACAATAGGTATTGTGTTTGAGGTAGTTGCCAGGTTACATTGACTGGTTACTGAGTACTGATAGGTTGTTAACATGTAGGCCATTTACTAAGCTAGGTAGCAACTTTATCGCTTTATTAATACATTATATGTACATAAGTTGCCATAAATATGCAATTATTTAATGGTGAATGACATACACACAGACCTGTATGTATTAACACTTCAGTTTATATGTCCTCCTCCCTCAGGTTTGGAATGTACATCCCGTTCTTCCGCCTCAGCTGTGATTTCCGCAGAGCT[G/T]GATCTATGTCTCCATTAAGTGGCATTGGTTCTAAAGATGTGGGTGCGGCTGCTTTGGGCCGAGGGGGGCGGGACTATTTGTCTGTCCTGAAGGAGACATGGAAACAGCACACCAGTCAGCTGTACAGTGCCCAGCCCATGCCCACCCACGCCTGCTGTCTCTCCCCTGACCTCATCCGCAAAGAGGTGGAGTACCTAAAGATGGACTTCAACTGGAGGATGAAGGAGGTTCTGGTTAGCTCCATGCTCAGTGCCTACTATGTTGCGTTCGTACCTGTTTGGTTTGTCAAGGTAAGTACATTGACAGGGCGTCATTTGTACACAAACACACATGTAAACACATGCAAGCAATGGACTGAGAGAACAGGTTTGTTTGATGAGGATTGCAGGTGGCTTAGAAATTCAGATCAGATTGAGACGAGGCGAAAATCATCCTTGGTATTTATACCAACTCATGCAAATAGTTTTTCCAGATATCATATTGATGGCTTTTCAATCTGC
Associated Phenotype:
Not determined