Busch Lab

ZMP

cstf3

Ensembl ID:
ENSDARG00000018904
ZFIN IDs:
ZDB-GENE-040426-1997, ZDB-GENE-040426-1997
Description:
cleavage stimulation factor subunit 3 isoform 2 [Source:RefSeq peptide;Acc:NP_999884]
Human Orthologue:
CSTF3
Human Description:
cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa [Source:HGNC Symbol;Acc:2485]
Mouse Orthologue:
Cstf3
Mouse Description:
cleavage stimulation factor, 3' pre-RNA, subunit 3 Gene [Source:MGI Symbol;Acc:MGI:1351825]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa16073 Nonsense Available for shipment Available now
sa16190 Nonsense Available for shipment Available now
sa32217 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa16073
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000025423 Nonsense 30 716 2 21
ENSDART00000052437 Nonsense 30 715 2 22
ENSDART00000025423 Nonsense 30 716 2 21
ENSDART00000052437 Nonsense 30 715 2 22
Genomic Location (Zv9):
Chromosome 18 (position 44173627)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 45762682
GRCz11 18 45759508
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTCCGGAGAAGGTWAAGAAAGCAGAGAAGAAGTTGGAAGAAAATCCATA[T/G]GACCTCGACGCTTGGAGCATACTGATTCGTGAAGCACAGGTTTAGTGACA
Long Flanking Sequence:
CTGTAATGTTTACCATAGTACTTTAAATAATCAGTCTGAAATCACATGCAAGTATGACTTGAAAGCAACATTAGCACTGTTTAATTGACTGAGCATTACTTATTTCGATAGTCATTGGCTATATAAACCTAATGATCTATTCAGAATTAGCTGTAAATACTTTCCTAACATGATATAAATAAGGAGAAGGTCTGAATGTGTGGATGTAAAACCAACTTTACCTCAACTGTGACTCAATATCAGATTTTCCTCATTCTGAATCATATTTTATTATCTTAGACTCACCCAACGTGTAGCATCATCTTTCATTTAAGCAGAAATTATCTGCAGGATTTAAGCATTGAGTTATGGTTGTCTAAAATAAAGATATTAAGCATGTAACATCCATAATTCAGAGTCTGTTTTTCATTCATGTGCCTTTTTCCCACTCCTCAACAGGCGGCAGAGTACATTCCGGAGAAGGTTAAGAAAGCAGAGAAGAAGTTGGAAGAAAATCCATA[T/G]GACCTCGACGCTTGGAGCATACTGATTCGTGAAGCACAGGTTTAGTGACACAGGATTGCATTCCTTTTTACCTGGGGTTCCATGTTTTGGGAGGGAACGGGAGGGTCGCGGATTTGTAAATCATGTAACAATCTAGTCTTTTGGGACGTACGTTCTGATTCTGTATGTAAATGAATTTCACTTCTTTTAGAATCAACCCATAGACAAAGCAAGGAAGACATATGAGCGACTTGTCGCCCAGTTTCCCAGTTCGGGCAGATTCTGGAAGCTATACATTGAAGCTGAGGTTATATTTCATTTTAATTTAAAAACATCTGTGCATGACGAAGCTTTCTCCACATTTTGATCGACAATGTGATATTCACACAACAGCAATAATCAGGGCATCAAGGGAAACTCTTATAGCTTGTATCATTTAGGGGTCATTTTTTTCTATTTTCTAAGTTTTATGAGGTGATATTGTTGCATGTTTCATCTGCAACAGCATTAAAACACTTTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16190
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000025423 Nonsense 30 716 2 21
ENSDART00000052437 Nonsense 30 715 2 22
ENSDART00000025423 Nonsense 30 716 2 21
ENSDART00000052437 Nonsense 30 715 2 22
Genomic Location (Zv9):
Chromosome 18 (position 44173627)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 45762682
GRCz11 18 45759508
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTCCGGAGAAGGTWAAGAAAGCAGAGAAGAAGTTGGAAGAAAATCCATA[T/G]GACCTCGACGCTTGGAGCATACTGATTCGTGAAGCACAGGTTTAGTGACA
Long Flanking Sequence:
CTGTAATGTTTACCATAGTACTTTAAATAATCAGTCTGAAATCACATGCAAGTATGACTTGAAAGCAACATTAGCACTGTTTAATTGACTGAGCATTACTTATTTCGATAGTCATTGGCTATATAAACCTAATGATCTATTCAGAATTAGCTGTAAATACTTTCCTAACATGATATAAATAAGGAGAAGGTCTGAATGTGTGGATGTAAAACCAACTTTACCTCAACTGTGACTCAATATCAGATTTTCCTCATTCTGAATCATATTTTATTATCTTAGACTCACCCAACGTGTAGCATCATCTTTCATTTAAGCAGAAATTATCTGCAGGATTTAAGCATTGAGTTATGGTTGTCTAAAATAAAGATATTAAGCATGTAACATCCATAATTCAGAGTCTGTTTTTCATTCATGTGCCTTTTTCCCACTCCTCAACAGGCGGCAGAGTACATTCCGGAGAAGGTTAAGAAAGCAGAGAAGAAGTTGGAAGAAAATCCATA[T/G]GACCTCGACGCTTGGAGCATACTGATTCGTGAAGCACAGGTTTAGTGACACAGGATTGCATTCCTTTTTACCTGGGGTTCCATGTTTTGGGAGGGAACGGGAGGGTCGCGGATTTGTAAATCATGTAACAATCTAGTCTTTTGGGACGTACGTTCTGATTCTGTATGTAAATGAATTTCACTTCTTTTAGAATCAACCCATAGACAAAGCAAGGAAGACATATGAGCGACTTGTCGCCCAGTTTCCCAGTTCGGGCAGATTCTGGAAGCTATACATTGAAGCTGAGGTTATATTTCATTTTAATTTAAAAACATCTGTGCATGACGAAGCTTTCTCCACATTTTGATCGACAATGTGATATTCACACAACAGCAATAATCAGGGCATCAAGGGAAACTCTTATAGCTTGTATCATTTAGGGGTCATTTTTTTCTATTTTCTAAGTTTTATGAGGTGATATTGTTGCATGTTTCATCTGCAACAGCATTAAAACACTTTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32217
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000025423 Nonsense 77 716 4 21
ENSDART00000052437 Nonsense 77 715 4 22
Genomic Location (Zv9):
Chromosome 18 (position 44168090)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 45757145
GRCz11 18 45753971
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATACGAAAACGTGGTTTAATAATGTTGGTTTTCAAATGTGTCCACAGATC[A/T]AGGCTAAAAACTATGACAAGGTTGAAAAGGTAAGCATTTGTTGTCGTATG
Long Flanking Sequence:
ACTTTAATGCAGGTGGCTTTGAAAAAAGAAATTGTAGATTGGGGTGTCCAAACTTGGTCCTAGAGGGCTGGTGACCTGGAAAGTTTAATTCCAACCCTAATCAAACATACCTGGACCAGCTAATCAAGCTCCTACTAGACATACTAGAAACTTCCTGCCAGATGTGTTGAAGCAAGCTGGAGCTAAGCTCTGCAGAACATCGGCCCTCCAGGACTGAGTTTGGACACCCCTGCTCTAGATGCATCATGTAACTTTTTCCAAAGGCTTGCACTCCAAAAAGCAGCATTTCAACTAAAACAATACAAAACAATCAGCTAAGTAGTTTTGTCTATCATTTGCACACATAAAATGGATTAAATTGAATAAAGGTTGAGATGAAAATGAAATGCAGGGTTGTGTGAATGTCACATTGTTGACCTCAAAGTGTGTGGAGCCACTCAATTTCACTTCATACGAAAACGTGGTTTAATAATGTTGGTTTTCAAATGTGTCCACAGATC[A/T]AGGCTAAAAACTATGACAAGGTTGAAAAGGTAAGCATTTGTTGTCGTATGGCAGCCACGTGTTTAATTTATGGATCGTGTGAAATTGCTGTGACTTGTGACAGACTCATGAACCATAAAATCTGGGCTTTATCTAGGTCACCACTTTAGGTCCTCAGAGTAAACAAAGATGGTGTTAAGGGATTAAACGACGCCTGCTTCGCTAGAAACACCCTGTTTACTCTTCTCAGTCCATCAACGGTCAATATGATATTAAAATATGAGAGGGAAAAAAATATATTTCAGGATGGGGATACATCCGAGTTTGAGATCACAGTTCAAAGACAAAACATCGTTCTGGTTGTGTAGATCTAGGGTTCCCAAGTACTTTATTTTCAGACATGAATCCAAGGCCTGGAAAGTACTTAAAAACAAACATTGGTCCTCGAAAGTGCTTGAATTGAAAGTTTATCTTGTTTTTTTCAACAATTGTACTTTTAAACGGTTGCTTAAAATGGTCAA
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa29096
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
G > A
Consequence:
Essential Splice Site, Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000025423 Missense 630 716 20 21
ENSDART00000052437 Essential Splice Site 629 715 21 22
Genomic Location (Zv9):
Chromosome 18 (position 44153542)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 45742597
GRCz11 18 45739423
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTTCAG[G/A]GCCCCTTTGTGCAGGTGGATGAGATGATGGAGGCTCTCAGAAGATGTGTA
Long Flanking Sequence:
TTCTTTTCAATTATGCAAAGATCACTTTAATAAGAGGTTAAAACACAAGTGTGTGGCTACAGCGTGTGAATATAAGCAGCTTCTAATGGTAAAAATGAATTAATTCTATATTTTATAATCACACTTGATTAAAACAGTCTGCAGAAACACTTTGATTGACATCAGAGGGGGAAAGCCCCGCCCATTAGTGATCATCATAAAAAGCCCTGAGGGAGAAGCAGCCGTCCGCATTTAGAGTTTTCACCTGCTGAAGATGTCAGCGACTAACAAGATTATATTGTCGAGTTTTAGGATGAATACTGTAGTCAATAAGGTGTAAAGGGTGGTATTATAAGCGCTTAACTTTCTGACAGAAATGCCATTAAACAAGAAAGAAGAATCGTTCTAGTGTGCATTCTGTATGGTGTGTAATTAGTTTTACTTTGTGATTGACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTTCAG[G/A]GCCCCTTTGTGCAGGTGGATGAGATGATGGAGGCTCTCAGAAGATGTGTATTACCAGACAGTATGTATTACCCTTTCTTCAGCAGGTTGTGTTCAATTTACATCTAGTCATTGTCCAAAGCGACTTACAATTAAGAAGGCATTAAGCAATTCAACAAGAAGAGGCAATACACACATTTAAAGGCTTGTACACAATACACATTTAAAGGCTTAACTAGGTTAACTAGGCAGGTTAGGGTAATAAGGCAAGCTGTTGTATAATGATGGTTTGTTCTGTAGACTATTGAAAAGAAATTACCTAAAGGGGCTAATAATATTGCTTTAAAATGGTGTTTAAAAATTAAAACTGCTTTTATTTTAGCCGAAATAAAACAAATAAGACTTTCTCCAGTAGAAAAAATATTATCAGACATAATACGGACATATTATCAGACATAATGTGAAAATGTACTTGCTCTGTTAAACATCATTTGGGAAAAAAAAAAAAAAAAATATATATAT
Associated Phenotype:
Not determined