ZMP
rnaseh2a
Ensembl ID:
ZFIN ID:
Description:
ribonuclease H2 subunit A [Source:RefSeq peptide;Acc:NP_956520]
Human Orthologue:
RNASEH2A
Human Description:
ribonuclease H2, subunit A [Source:HGNC Symbol;Acc:18518]
Mouse Orthologue:
Rnaseh2a
Mouse Description:
ribonuclease H2, large subunit Gene [Source:MGI Symbol;Acc:MGI:1916974]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa375 | Essential Splice Site | Available for shipment | Available now |
| sa11134 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa375
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045894 | Essential Splice Site | 109 | 307 | 4 | 9 |
Genomic Location (Zv9):
Chromosome 1 (position 52212195)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 51083879 |
| GRCz11 | 1 | 51718243 |
KASP Assay ID:
554-0355.1 (used for ordering genotyping assays)
KASP Sequence:
GCCCTTCAGATCCTCTCGCCCAACATGATTTCCACCAGCATGCTACAAAG[G/T]TACCAGCATGCTAGATTTCAGTGAAGAGAAGGCTAGTGTGATGTTATGTC
Long Flanking Sequence:
GTCGCTGGTTTGAGTACCAGCTGTGCCAGTTGGCATTTCTGTGTGGAGTTTCCAAGTTCTCCCCGTGTTGGCGTAGGTTTCCTCCAGGAGCCTCCACAGTCCAAAGTCATGCGCTATAGGTGAATAGGGTAAACTAAATTTGCTTAAGTGTATGAGTGTGTGTGTGTGAATGAGTGTGCATGGGTGTTTTCCAGTACTGGGTTACAGCTGAAAGGGCATCCACTGTGTGAAACATATGCCGGAATAGTTGGTGATTCATTCCGCTGTGGCGACCCCTGATGAATAAAGAGACTAAGCCAAAGGAAAATGAATGAATGGATATTTTGTTAGAGAGCATGTGTGTAAATCTTCAGTATATTTGTTGTCTATTTAGACTCAAAGACGCTGACGGAGGCTGAGCGAGAGAACCTGTTTGTGAAGCTCGATGAGGCCAAAAGTTTCGTAGGCTGGGCCCTTCAGATCCTCTCGCCCAACATGATTTCCACCAGCATGCTACAAAG[G/T]TACCAGCATGCTAGATTTCAGTGAAGAGAAGGCTAGTGTGATGTTATGTCAGATTAAATCAGCACAAAACAAACATTTTTGGTGTACAAAACTGCTTGTCAAAGCATAGTTTCCACAACATTTCGCTCTGGTTGGTAAACTCCTTCAAACTACGACTAGTAAAGCAGGTTTTCAGTCCACTTGAAATCAAAATTTACTTTATTTACTAGCTCACATTGTTATTCCTAAAGTCTGCATGAATTGGAAGCTGCGGCTGTCTTTTTTTTCATATAGTGATGCAGTTCCTACAGAAACGGAATAATAAATGAGACAACAGTGGGCGTGGCTTGTTTTCTTTTTCTACTCATGGCTAATTGGATGTCTTAAAGTAGGCATTTCATTCAGAAAGAAAAGGAAAAGGGTTTTGGGAGAGTTATTACAGCCTAACAAACTCCTCCTGCTCACCATTTCTGTTTGTTGTCAAATCTGACAGCTGGAGGGGCGTGGTTAAGTATGTTAGT
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa11134
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045894 | Essential Splice Site | 109 | 307 | 5 | 9 |
| ENSDART00000045894 | Essential Splice Site | 109 | 307 | 5 | 9 |
Genomic Location (Zv9):
Chromosome 1 (position 52210499)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 51082183 |
| GRCz11 | 1 | 51716547 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ANTAGCTGCRAGTATAWCTGACATCAAGGTTTTNNNGTTGTTATTATTTTTTC[A/C]GAGCAAAATACAATCTGAATGCCCYTTCACACGATGCAGCGATTGGCCTG
Long Flanking Sequence:
TGTGGAATGGCCTAGCCAATCACCTGACTTGAATCCAATAGAGAATACAAAATAAAGATCAAAATTAATAGACGAGACCCACAGAACCATCAATATTTTTATACTCTGTTGAAGTCTGTGAAAAACTCATGCCTGAGCAATTCATGTGACTTCATTCTCCATATGAGAGGCGTCTTTAAGCTGCCATCACCAACAAAAGCCTTTTATATAAAGTGTTAAATACGTTTTAATAGTTCAGTAATTTCTCCTTGTGTCATTCCATTGTTATTACACAAAATATTTCAGATTTTTTTTTTGTCTGTTTCTTTTTATGTTAACATTGTTCTGGTTTTTATCGTAATCTGGTTCAATTCCATGTCAAAAGCTCCTTTAGAAATGTTATTTCCAGGAAACAAACATGACATGTTCAGTACTTATTTTCCTCGCTGTATAGAATATAGAATAAAAAAAAATAGCTGCAAGTATATCTGACATCAAGGTTTTGTTGTTATTATTTTTTC[A/C]GAGCAAAATACAATCTGAATGCCCTTTCACACGATGCAGCGATTGGCCTGGTGCAGTATGCTCTGGATTCTGGGGTGCAGCTCAAAGAGGTGATTGAGACAAAGCAAACCTGCATGATAAACCGCAGAAATGGCCCATAATGACGAGTCTGTTTTTCCTCTCAGGTGTTTGTGGACACTGTGGGTCCAGCAGAGAAGTATCAGGACAAGCTGTCGCAACGGTTCCCCGGTGTGGAGGTCACAGTCCGTCCCAAAGCTGATTCCTTATTCCCAATCGTCAGCGCTGCCAGCATCTGTGCAAAGGTAATCTGCCCATCAGAGGTGGAGAAAACGGGAGTGTTAGTTATTAAAGGTCCAGTAAAGTGAAATGTGCATTTTTTAATTCAAAATTTGCTGTAATCACATCTGAAAAAAGCATAGAGTGGGAACCATAGGTGTTTTTCTTTATAAAAATATTCTATTCTATTATAAAAAGACAAATGATTTGGGTGTCTATCTCAT
Associated Phenotype:
Not determined