ZMP

bdnf

Ensembl ID:

ENSDARG00000018817

ZFIN ID:

ZDB-GENE-000412-1

Description:

brain-derived neurotrophic factor [Source:RefSeq peptide;Acc:NP_571670]

Human Orthologue:

BDNF

Human Description:

brain-derived neurotrophic factor [Source:HGNC Symbol;Acc:1033]

Mouse Orthologue:

Bdnf

Mouse Description:

brain derived neurotrophic factor Gene [Source:MGI Symbol;Acc:MGI:88145]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa34104	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa34104

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000014843	Nonsense	133	270	2	2
ENSDART00000075389	Nonsense	141	239	2	2
ENSDART00000131009	Nonsense	133	270	2	2
ENSDART00000132353	Nonsense	161	185	2	2
ENSDART00000144682	Nonsense	133	143	3	3

Genomic Location (Zv9):

Chromosome 7 (position 33260657)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	31654997
GRCz11	7	31926147

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GGTGATGATCAGCAACCAAGTGCCTTTGGAGCCGCCGTTACTCTTTCTCT[T/A]GGAGGAATACAAAAACTACCTGGATGCCGCCAACATGTCGATGCGTGTGC

Long Flanking Sequence:

TTTTACATTTTGTTTTCTGTCCCCCCCTCCCCTTTTCCTCACTCCCCCATCCCTCTTGTCCTTCCCCTTTTGCTGTCTCCAGTTCCAACAGGTTAGAAGAGTGATGACCATCCTGTTCGTTACTATGGTTATTTCATACTTCAGTTGCATGAGAGCTGCGCCCATGAGAGAGATCCCGGGCGTGCAGGGGGGCCACCGGGCCGAGGGCTACCTGGGCGCCGCTGCCGCTGCTGCCGCTGCCGTCACATCGGGCAGCCGAGGCCACGGGACTCCACAGAGTGGGGGCGGGCTGCCCTCGCTCACGGACACTTTCGAGCAGGTCATTGAGGAGTTGCTTGAGGTGGAAGGGGAAGCGACGCAGCAACTGGGGCCTGGGGCCGACCAGGGCCAAGGAGGGGGCGGCCCTATAGATGCGGCAGACTCGAAGGACGTTGACCTGTATGCCTCGCGGGTGATGATCAGCAACCAAGTGCCTTTGGAGCCGCCGTTACTCTTTCTCT[T/A]GGAGGAATACAAAAACTACCTGGATGCCGCCAACATGTCGATGCGTGTGCGGCGACACTCGGACCCCGCACGGCGGGGGGAGCTCAGCGTTTGTGACAGTATTAGCCAGTGGGTGACAGCTGTGGACAAAAAGACGGCAATAGACATGTCGGGCCAGACGGTCACCGTTCTGGAGAAGGTCCCCGTGACTAATGGTCAGCTGAAGCAATACTTTTACGAGACCAAATGCAACCCCTTGGGGTACACAAAGGAGGGCTGCCGAGGAATAGACAAGCGGCACTATAACTCGCAATGCCGGACAACCCAGTCTTACGTGCGAGCCCTTACCATGGATAGCAAAAGGAAGATCGGCTGGCGGTTTATACGGATAGACACTTCGTGTGTATGCACATTGACCATTAAGAGGGGCAGATAGTGTACACAATGTATAGATTTTATTGAGAGTTCTAAAAAAAGAGAGAGAGAAAGAGAAAATATCTATTTGTATATACATAACAGGG

Associated Phenotype:

Not determined