ZMP
cpsf6
Ensembl ID:
ZFIN ID:
Description:
Cleavage and polyadenylation specificity factor subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q6NWC6]
Human Orthologue:
CPSF6
Human Description:
cleavage and polyadenylation specific factor 6, 68kDa [Source:HGNC Symbol;Acc:13871]
Mouse Orthologue:
Cpsf6
Mouse Description:
cleavage and polyadenylation specific factor 6 Gene [Source:MGI Symbol;Acc:MGI:1913948]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa9322 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa9322
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000038346 | None | None | 148 | 4 | 11 |
| ENSDART00000082289 | Nonsense | 172 | 558 | 4 | 10 |
| ENSDART00000129521 | Nonsense | 172 | 545 | 4 | 10 |
| ENSDART00000138291 | None | None | 117 | None | 4 |
Genomic Location (Zv9):
Chromosome 4 (position 1917544)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 2207251 |
| GRCz11 | 4 | 2056564 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCGTCACYCCTTGCAAYAAACAGTCTCTCAGYCAGTTCGAGATGCAGTCA[C/T]GAAAAAGTGAGCGCAGAGGATTCGACAATTCACATTATCATAAAGGTCCC
Long Flanking Sequence:
AATGCAACAAACGCAGGCAAAACATGCATCAAAACTGACTTTTTCAAATATAGTGCAAACTTTAATTTGAAAGTATCACCTGTTATATAATAACCTAAGATGTTAAGTGGATGCAATGTTGATGTGTTTTTCTTTTTACAGTGGACCACTGATGAAGATTTAACAGATGCCATTCGCTCAATAGGCATCAATGATGTGCTGGAGATCAAGTTTTTTGAGAACAGAGCAAATGGCCAGTCTAAAGGGTAAGCAAAACCCAGTTTTATCAACTGAATCTTGACCTGGGTTCGTGATAATAAAGATCTCTCTGTGGCCCTCACCCCTGTGGCGTTTGAAACGGTTGATTTGCTTTGCTTTAAAGGTTTGCTCTGGTCTGCGTGGGATCAGATTCCTCTTCCAGGAAGCTCATGGATCTGTTGTCTAAACGGGAGCTGCATGGACAAAACCCCATCGTCACCCCTTGCAACAAACAGTCTCTCAGTCAGTTCGAGATGCAGTCA[C/T]GAAAAAGTGAGCGCAGAGGATTCGACAATTCACATTATCATAAAGGTCCCGTGAATTGCTTTGAAATGTGCATTTTTGTTTGATGTGTGATGTAGTTTCCAATGAAATGTGAAGACAGGGTGGGACATAGAATAGCTCCTTCCCCTTAAAAAGATGGGTGGGACGTGTCAAATATATGCATTTGATTGGCCAGCAGATTTGATAAAAAAAAAAATCCATTTAAGATAAAGTGACAATCTGCAACTTTTTATGTTTTTATCTTGTAAATGTAAATTTTATCACTGTTTTGGAGCACACTAGACTATAGATATCCTTAAAACTAACATCTAATGTTAATTTTGATTTCACGGGGACTTTAAACTTACTGAATGAGAATAGCGTTGCTGTATGTGTGCTGCAGTTTAGAAGAGTGTGTTTTGGTCCACGCAGGCACACAGTCAGGACAGATGTCAGGAGAGGGGAAGGCTGGTCCTCCAGGCTCAGGATCTCGAGGTGGAGGA
Associated Phenotype:
Not determined