ZMP
prkcha
Ensembl ID:
ZFIN ID:
Description:
protein kinase C eta type [Source:RefSeq peptide;Acc:NP_001116528]
Human Orthologue:
PRKCH
Human Description:
protein kinase C, eta [Source:HGNC Symbol;Acc:9403]
Mouse Orthologue:
Prkch
Mouse Description:
protein kinase C, eta Gene [Source:MGI Symbol;Acc:MGI:97600]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa6313 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa6313
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000034745 | Essential Splice Site | 202 | 712 | 4 | 14 |
Genomic Location (Zv9):
Chromosome 13 (position 31952540)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 31598488 |
| GRCz11 | 13 | 31728938 |
KASP Assay ID:
554-5214.1 (used for ordering genotyping assays)
KASP Sequence:
TTTTTTTATTCCAGGGGKGTTTTTGGAAAACAGGGCTACCAATGTCAAGG[T/C]AAGCAGACRCTYTGTCTCTCTTTTACTGAATTAAATTTTTTTTTNWAATTG
Long Flanking Sequence:
ATATTTAAGTAATATGAAACGTTCACATATCTTTTGTGAGTTTGTTATTTGAGGTGTAGAACGCAGAGAAAGTGGCTGCATGGAGAGAGACACTGCAGCGCTGGTGAAGATTTTGGGTGTTTACAGTGGTTTGACTGATAAAGCACATGAAGTGATGCATGTAATGTTATGAATAATGGCTATTTCTTTTTCAAAAACAAACTGTAGTTGCAGATTCCTGCAGATGAGTTATTTGTAATATTTGAGTCACTGTGTAATGTCAGGTAGATTTCATTCCTTTATAAAAGAACTGCAAATAAATGAAAACATCAGAACAAACTATTCAGCCTTTTTTTATTCATAATATATAATTTGCACATTGCATAAAAAAGTTTACTATATAAGAGTGCCTTATGTAGGGGATTTGTTTTAAATGCACAACCTTTTATGTGATTTTTTTTTTTTGTGTTTTTTTTTTATTCCAGGGGTGTTTTTGGAAAACAGGGCTACCAATGTCAAGG[T/C]AAGCAGACACTTTGTCTCTCTTTTACTGAATTAAATTTTTTTTTAAATTGGTTTTAATGCATCAGCTCTGTTTGTGTGTTTTGTGTGTGTTTGCATATGGGTTAGTTTGCACCTGTGTTGTGCACAAGCGATGCCATCAGCTTGTGGTCACGGTTTGTCCACGCATGAAAAAACCTGCCAAGGAGCAGGTAACACAAACTTACTTGCACTATTTTCACACGATGTTTTTATCATATCCAGGGGTGTACAAACTCGGTCCTGGAAGGCCAGCGTCTTACATAGTTTAGCTTCAACTTCCTTTACCACACCTTCTTTGAAGTTGCTAGTATACCTAGAAAGAGCTTAATTGGCTGTTCCATGTGTGTTTAATTGCAGTTGGAAATAAAATATGCAGGACACCTGCCCTCTAGAACTAAGTTTGGACACCCCTGATTATATCCAATATCTGTAAACATTTTTAGAAGTGCCTTTTGCCTGTAGAATAACAGAAACACAGATGC
Associated Phenotype:
Not determined