Busch Lab

ZMP

prkcha

Ensembl ID:
ENSDARG00000018382
ZFIN ID:
ZDB-GENE-080402-5
Description:
protein kinase C eta type [Source:RefSeq peptide;Acc:NP_001116528]
Human Orthologue:
PRKCH
Human Description:
protein kinase C, eta [Source:HGNC Symbol;Acc:9403]
Mouse Orthologue:
Prkch
Mouse Description:
protein kinase C, eta Gene [Source:MGI Symbol;Acc:MGI:97600]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa6313 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa6313
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034745 Essential Splice Site 202 712 4 14
Genomic Location (Zv9):
Chromosome 13 (position 31952540)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31598488
GRCz11 13 31728938
KASP Assay ID:
554-5214.1 (used for ordering genotyping assays)
KASP Sequence:
TTTTTTTATTCCAGGGGKGTTTTTGGAAAACAGGGCTACCAATGTCAAGG[T/C]AAGCAGACRCTYTGTCTCTCTTTTACTGAATTAAATTTTTTTTTNWAATTG
Long Flanking Sequence:
ATATTTAAGTAATATGAAACGTTCACATATCTTTTGTGAGTTTGTTATTTGAGGTGTAGAACGCAGAGAAAGTGGCTGCATGGAGAGAGACACTGCAGCGCTGGTGAAGATTTTGGGTGTTTACAGTGGTTTGACTGATAAAGCACATGAAGTGATGCATGTAATGTTATGAATAATGGCTATTTCTTTTTCAAAAACAAACTGTAGTTGCAGATTCCTGCAGATGAGTTATTTGTAATATTTGAGTCACTGTGTAATGTCAGGTAGATTTCATTCCTTTATAAAAGAACTGCAAATAAATGAAAACATCAGAACAAACTATTCAGCCTTTTTTTATTCATAATATATAATTTGCACATTGCATAAAAAAGTTTACTATATAAGAGTGCCTTATGTAGGGGATTTGTTTTAAATGCACAACCTTTTATGTGATTTTTTTTTTTTGTGTTTTTTTTTTATTCCAGGGGTGTTTTTGGAAAACAGGGCTACCAATGTCAAGG[T/C]AAGCAGACACTTTGTCTCTCTTTTACTGAATTAAATTTTTTTTTAAATTGGTTTTAATGCATCAGCTCTGTTTGTGTGTTTTGTGTGTGTTTGCATATGGGTTAGTTTGCACCTGTGTTGTGCACAAGCGATGCCATCAGCTTGTGGTCACGGTTTGTCCACGCATGAAAAAACCTGCCAAGGAGCAGGTAACACAAACTTACTTGCACTATTTTCACACGATGTTTTTATCATATCCAGGGGTGTACAAACTCGGTCCTGGAAGGCCAGCGTCTTACATAGTTTAGCTTCAACTTCCTTTACCACACCTTCTTTGAAGTTGCTAGTATACCTAGAAAGAGCTTAATTGGCTGTTCCATGTGTGTTTAATTGCAGTTGGAAATAAAATATGCAGGACACCTGCCCTCTAGAACTAAGTTTGGACACCCCTGATTATATCCAATATCTGTAAACATTTTTAGAAGTGCCTTTTGCCTGTAGAATAACAGAAACACAGATGC
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa28144
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034745 Nonsense 445 712 10 14
Genomic Location (Zv9):
Chromosome 13 (position 31962090)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31608038
GRCz11 13 31738488
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAATGGAGTTTGTGAATGGAGGAGATCTGATGTTTCATATTCAGAAATCC[A/T]GAAAGTTTGAGGAGAACCGAGCCAGATTTTACACAGCGGAGATCACATCT
Long Flanking Sequence:
AAAGCCTTACACTTCTGATTATTTGAAGAACTAAAAAATGATTGCATTTCACAAGTGTTTTCTGTGCAGCATGCATCATGGTCAGAAAAGTGGCTGCGGGTGGTCTCTCAGTGTGCGGTCTTTCAGTTTGATGTATAGGCAGAGCTGAACTCAAGCAGAGACTTAGTTCTGTCATTTCAAACTTATGATGCTCTTCGTTTTAGATTACCCTCCAAACCTCTCAATTCCATAATCCCATGTTTCCTGCGGTCTTCTTTCTCCAGTATTTATGATATCTTTCTCCCATGAATCTTCTAATGGTCATGGCTTGCAAGGTTAACCATCAACTACTTGATTTTTCTTGTAAAGAGGTGAATTTCCTTATTGTGTTGTAGGTTTAATTAAATTTTTGCTGATGAGTAAATCTGCATCTTAATTTCCTAATCTTTTCACAGGAGCGTTTGTTTTTCGTAATGGAGTTTGTGAATGGAGGAGATCTGATGTTTCATATTCAGAAATCC[A/T]GAAAGTTTGAGGAGAACCGAGCCAGATTTTACACAGCGGAGATCACATCTGCGCTCATATTCCTCCACAGCAAGGGGATTGTATACAGGTTAGTTACGCACAAATGCACTCCAAACAAAAATTAAGGTGCCATGACCTAAAGTGCCTTGTAATGTGCAGCTGTTCTGTGTGGGACTTCATTTCAGCTGAAACAAAAAGAGGAGATGGGATTTATAGAGAAGATTCTCCACTTTTTAAAACTAGCCAGTTTGTTTGTGTTTTGTTTATTTTATTCATTCTAGCTGCTGCAGTCTATATTAGCAATGATTAGTTTTATCAGCTTCAAATACAGGACAGTATGTTTCAGTATCCAGAAATTTGGGAGGCTCATTCCTGCATTTTTTTAAAATAATAAACTTAAGATGAACACTGTGTCGGCTACTATTTGGATTTTTTGTATGCATTTTTATGATAATATAATTCTAATTTTATTTTTAATTCTAATAATAATAATAATTCTG
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa28145
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034745 Nonsense 530 712 12 14
Genomic Location (Zv9):
Chromosome 13 (position 31967555)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31613503
GRCz11 13 31743953
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTTGTTGTATATGCCCTGCAGATTCTCCAGGAATTACTGTACGGGCCGT[C/A]GGTTGATTGGTGGGCTCTCGGTGTGCTGCTCTATGAGATGCTCTCAGGCC
Long Flanking Sequence:
AACCAGCCAAAGTGGCCAAAGGAGGTGTCTGTCTAACCCGCCACAGCTGAAATCTAGCCGCATTTTGTGGATAGGCGGTGTTAATATAAAGCTTTGAATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATAGAAAATGCAAAAATACTAATTAGTTACAACAAAATTAAAGCAAAAAATTTGTTTAATGTCCTGCAAAATATGCAATACAATACTATATAATGAAGTAAGGAGATGCTCTTTGGTGTGATCAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACACAAGGCAGGATTTCCTCAGTGTAATAAATGTTGTTGTATATGCCCTGCAGATTCTCCAGGAATTACTGTACGGGCCGT[C/A]GGTTGATTGGTGGGCTCTCGGTGTGCTGCTCTATGAGATGCTCTCAGGCCACGCCCCCTTCGAGGCAGAGAACGAGGATGACCTTTTTGAGTCCATCCTGACGGAAGAGATCATCTACGCATCCTGGCTCAGCACAAACGCTGTCGACATACTGAAAGGGGTAGGCTGTTCACTTACGAGCCCTGAAGTCACACAGACATGAATTGGCTTGAACAGAGCAACGGCTGCTTTTATATGTCCTGATTGGTGGGAGGCATATGGTGTGAACTAAAACATAGTTCATGCAACAGTGAACATCAGTAAACAGTAAACACCTCCCATCTGATCTCTTTCTGTCTCTCATGTGCTTTCCTCCTCTTACATAACTATATTTAGCCCCGATCCACAATCCACTGCTATCACATGACTGCAGCTAAAAATAAAGCGCTTCACATCAAATGTACACACACACACATGCACAACCCCCAACTCTCAGATTCTCTTTAGTATTTGCTTTCGAT
Associated Phenotype:
Not determined