Busch Lab

ZMP

depdc1a

Ensembl ID:
ENSDARG00000018165
ZFIN ID:
ZDB-GENE-030131-9827
Description:
DEP domain-containing protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q803Q4]
Human Orthologue:
DEPDC1
Human Description:
DEP domain containing 1 [Source:HGNC Symbol;Acc:22949]
Mouse Orthologue:
Depdc1a
Mouse Description:
DEP domain containing 1a Gene [Source:MGI Symbol;Acc:MGI:1923381]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa21241 Nonsense Available for shipment Available now
sa34360 Nonsense Mutation detected in F1 DNA Not yet available
sa2458 Essential Splice Site F2 line generated Not yet available
sa13687 Nonsense Available for shipment Available now
sa41162 Nonsense Mutation detected in F1 DNA Not yet available
sa18914 Essential Splice Site Available for shipment Available now
sa16447 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa21241
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000049676 Nonsense 57 800 2 12
Genomic Location (Zv9):
Chromosome 8 (position 17243870)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 16688758
GRCz11 8 16724470
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACGAACTGCTTCACCGCATCCACCGCTGTGGACTGGTTACATGAACTCT[T/A]GAAAAACAACAGCAATTTTGGACCAGATGTCACCCGACAGCAGACAGTCC
Long Flanking Sequence:
TGAACAATATAGTGAGCATGTCAAAAGTTGTCACTGAATGAATGTGCGAATATCAAACCAACTTTACCTCACTTTAGCTCACTTGTAAGTAGTGTAAGTCATATGAAGTTAACTATATATGCTACTATTTATCTTCCAAGTGAACTATGTTTACAAATCATCATTTCTTTATGCTCATTGTGTGTATTTAATGACAATTATGAATATATTTTAACAACAAACTGTAACAATAGAACTTTACAGAATATTTTTTGTTATGCTGAATTATCAGTTTTTGTGTTTTGGACAATCTACCAACCAATTACTTAGTGATTATAGTTTATTATCTGAAGTGATAATAAATAAATGTATTGTGTGATATGATTTCTTTATTTTACAGTGGAATGAAGTGACCAAGCTTTTCCGAGCCGGGATGCCTTTGAAAAAGCACCGGCAGCACTTTAGAGTTTACACGAACTGCTTCACCGCATCCACCGCTGTGGACTGGTTACATGAACTCT[T/A]GAAAAACAACAGCAATTTTGGACCAGATGTCACCCGACAGCAGACAGTCCAGCTGCTGAAAAAGTTTTTGAAGAACCATGTTATTGAGGATGTGAAGGGTAGATGGGGCATGGAGGACCTGGAGGACAACAGCCAACTATACAGGTCTGATCAAATGGGTGTTTTATAAAGGTCTGAAAAAAATGCATACAGACATTAGACAATATTTTCTGGTTTAATATGTGTTTAAGGTTTCCATCAACATCTCCTCTGAAGCCTATTCCTAACCGTCCCACTGTTATGAGGAGAAAGAGCTTATCCATGATGGACAGGGAGAGTTTCTTCAAGTTCAGGGGCTCGAAGAAATTTGATAAAGAAACATTGGTAAATATTACTCGCTCTAAACATATTGTTATATTTGTAGTTCATCCAAAAATGAAACTGTGAGAAGACATTTACAACAGAACACTATAATTTTTGCTGAAACCCTGGTGTTTGCTGGTTTATAAAGTCAAAGTCAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34360
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000049676 Nonsense 191 800 5 12
Genomic Location (Zv9):
Chromosome 8 (position 17241566)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 16686454
GRCz11 8 16722166
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTAAATGTCATATTGTTGTTGAATTTGATTGTCATTTGAATGTTCAGTT[T/A]GCAGAAGTTGGTGGGATCTGCTTCTCTGGAAGGCGTTTTGGATCCAGCCA
Long Flanking Sequence:
ATGGTAAGAATTAATAATTGAATTCAATGTTTATTATCACTCCTAATAAAAACAGAAACACTTTGATTAACACCCCTTTTGTTATGTCATCAGAGGGGGAAAGCCCCACACATTAGAGACGATCTCTCCCTCATTAGCATAAACAGCCCTGAGTGAGAAGCAGCCATCTGTTATTAGAGTTTTCACCTGCTGAAGATAATGTCAGCGACTAAGAAGGTTAAAATGTGGAGCTTCAGGATGCACAAATAAACTCTCAAGTCTCCGTAGACGACCTTCTTCTGAGAAATTTTCAGTTTTTCGCAGAGATAACGTTAGTCTTTAATGTCTAGAAATCTTTGCTGATGGCTTGTTTTGCATTTTTGTTTCTGAAAATTGTGCAATGGAGTAAAATTGTAAAGAATTCCTTTAGAAAATGATTACACATTAGTTGCATATTTTAATTAGTAATTTAGTAAATGTCATATTGTTGTTGAATTTGATTGTCATTTGAATGTTCAGTT[T/A]GCAGAAGTTGGTGGGATCTGCTTCTCTGGAAGGCGTTTTGGATCCAGCCAAGGTCAATCCTCAGTTCATTGTGTATAATATGACCAAAGTCAATAAACATGGAGTCGTTTCATTGGAGGATAAAACAGGTAGGCCAGATGTGTGTCATCTCTGTGTAAAAACATAGTGGTGATAGTCATATTTTCACATCGTGAATAATATCTTATTTTTCTCCCTCCGTAGAAGATTTACCGCACTGGGTATTGTCTGCTATGAAATGTCTAGCAAACTGTAAGTTTTATATTACAAAAATTAAAAACTGTATTTTGTAAACATGTCAACTTTGGGTTTTGGAAGTTCAGGTGCTTTTATAAGATACTAAATAAGATATTACTTAAAAGGTTTTATTTGGACAATCAAGATCATTATGAAGTTAATATTTCTTGCTTTTAATCTTTAATAATGCTACACATAAACAATGATATTATTTTGGTGATGTTTTTGTATCTGAAGCCTTCACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa2458
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000049676 Essential Splice Site 296 800 7 12
Genomic Location (Zv9):
Chromosome 8 (position 17240757)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 16685645
GRCz11 8 16721357
KASP Assay ID:
554-3331.1 (used for ordering genotyping assays)
KASP Sequence:
CAGCCACTGCTCACTTATCAGTATTACGAACTCTTTGTCAACATCCTGGG[T/A]ATGTATGAAACATGTTTTGGATTTTGCATGTCTGTSATCAGGTTATGCTG
Long Flanking Sequence:
TAAACATGTCAACTTTGGGTTTTGGAAGTTCAGGTGCTTTTATAAGATACTAAATAAGATATTACTTAAAAGGTTTTATTTGGACAATCAAGATCATTATGAAGTTAATATTTCTTGCTTTTAATCTTTAATAATGCTACACATAAACAATGATATTATTTTGGTGATGTTTTTGTATCTGAAGCCTTCACATACAGAGATATGGCCTCGAACATTTGTCCACTCTGTTAAGTTTGCATTCCTGTACAGTATTACATATTACAACAGCCAGATAGAGACCATGCATATATTGTCTTTTGTCATTTTTCCGTGTATAAAACTCAAAATAATAAATTTTTTAATATTATGTATTATTTTTCAGGGCCAAAGTATGACTCAGACCAGCCGACTTACCTAGGATTTGAGCGGGATGTGTTTAAAACGGTCTCAGACTACTTCTACAGTCTTCCTCAGCCACTGCTCACTTATCAGTATTACGAACTCTTTGTCAACATCCTGGG[T/A]ATGTATGAAACATGTTTTGGATTTTGCATGTCTGTGATCAGGTTATGCTGTAATTAACTGGTTACATATACACCACTGTTCAAAAAGTTTGGTGTTCAGGATTATCTAAGGTATTTTTTTAAGGTAAGATTTATCTATTTAACTTTAAAGATCAACACTGAAATGCTTCTCCTTTTGATTTTTTTATTATTATTTATAAAAAATTCTGATTTAACTTAACAAAAATATTAAGAAGCAAAAGTATGTTTTGCAAACTCCAAATAATAGACGGATTTGCCAATACAGCAATAATTATTTTTAAATATGTGTGGTCATGGACCACAAAAGCAGTTTTATGTTGTTCAGAAATGTTAGCAAAAGCCAAAAATACAGTGTATGGGTAAAAATTAACAATTTTGTTTCATTCTACAAAGCATTAGCATATTAAGTAAAGTTCATGCTCCATGTAGATATTTTGTCAATTGCCTTATGAATAAATCAAAACTTGATAATTTTTTATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13687
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000049676 Nonsense 344 800 8 12
Genomic Location (Zv9):
Chromosome 8 (position 17238403)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 16683291
GRCz11 8 16719003
KASP Assay ID:
2260-0354.1 (used for ordering genotyping assays)
KASP Sequence:
TGTGAACCCAGCCAACCTGTTCAGGTCCACCGAATGYCTWCTGCTCAGCY[T/G]AATAAGAAARGAGGCCATCGATGAAGCCGATTCGCCCATGAAGGAAGTTT
Long Flanking Sequence:
AATATATATTTAAGATTTACACAAACATTTGAAAAGTTGTGTATATATTTAATATAATGTACCCATGTTAATGTTTTTTGAGATTTTAGGCTTGTGTTTTGTTTTTTTACACACTCATCCTTTGTCCTTTCTGGGGAAAGTCCTACTAAAAGGGTCATCAAAATCATTTGGCTGTGGGTCTCAATTTACAAAATGTTAATAAGAACAAACTATGGAGATGCGTGTCTACTGACTGCACTGCTTTTGTGGTGTCAGACGATGTTCAAAACTAACCCTGTCTGCTCTGTTTTACATGTCTCACTTCGTTGCCTGCCTCTTTGTTGTTTTATGTTCTGTTGTCTGGTCCTTTTTGCTAGTTATGTGTGGCTACATCACGACTCCTAAATCCCAACCTGGAAAGCGTAAAAACCAGGAGGAGCCAAACTGCCCACAGCCTGCCAAAAACCCATATGTGAACCCAGCCAACCTGTTCAGGTCCACCGAATGCCTACTGCTCAGCT[T/G]AATAAGAAAAGAGGCCATCGATGAAGCCGATTCGCCCATGAAGGAAGTTTTCAGTTCAAAAACAGAGACCAAGTTAGAAACCCGTAGAGTTTTTAGAGGTAGAAGGGTCAGCGATGGAGACAGGCTGGATGGTAGCTATCTAGATGTTTCTCAGGCCCACAAAACAGATGTCCCATATGGCAGGCTTCGTCCCAGAAGTTGTTCACTGGAGGGAAACATTAATAACTGTGCCAAAAACAGACTTTTTAGGTCGTCTGAAAGCCTCGAGTCCTGTAGCAGTGATAAATCAAACCCTGAAACTGATTCTCCATTAGAACCAAACCTCCAGAGTTCCTTGGTATCCATAAACACTTCCGGCAGCAGCGTGAGCTCCCAACTTTCAGCAGATCTGCGGCGAAACAACTCGAGACCTGCCAGAGCCCGGCCCAGAAGCATTGGTAACTTGTTTGATATAGAGGAGAATAGAGAAATGTCTGCTAGCAGCTTTAGTGTTCATGCAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41162
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000049676 Nonsense 535 800 8 12
Genomic Location (Zv9):
Chromosome 8 (position 17237830)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 16682718
GRCz11 8 16718430
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCTGACTCCACATCCAGTGTTGGCTTCAGAGGTCTCGGTTTGTCCAGTT[T/A]GCATGGAAGTTGCGTGGATGTTAGAACAGGTCCAAGCTTTAGCAGACGCT
Long Flanking Sequence:
GTTAGAAACCCGTAGAGTTTTTAGAGGTAGAAGGGTCAGCGATGGAGACAGGCTGGATGGTAGCTATCTAGATGTTTCTCAGGCCCACAAAACAGATGTCCCATATGGCAGGCTTCGTCCCAGAAGTTGTTCACTGGAGGGAAACATTAATAACTGTGCCAAAAACAGACTTTTTAGGTCGTCTGAAAGCCTCGAGTCCTGTAGCAGTGATAAATCAAACCCTGAAACTGATTCTCCATTAGAACCAAACCTCCAGAGTTCCTTGGTATCCATAAACACTTCCGGCAGCAGCGTGAGCTCCCAACTTTCAGCAGATCTGCGGCGAAACAACTCGAGACCTGCCAGAGCCCGGCCCAGAAGCATTGGTAACTTGTTTGATATAGAGGAGAATAGAGAAATGTCTGCTAGCAGCTTTAGTGTTCATGCACCCGTGGCTGAAATTACTATGAGACCTGACTCCACATCCAGTGTTGGCTTCAGAGGTCTCGGTTTGTCCAGTT[T/A]GCATGGAAGTTGCGTGGATGTTAGAACAGGTCCAAGCTTTAGCAGACGCTGTCAGAGCTCTCTGGACCTGAGCAAACCTGCACCCGCTCGGCCTCCTTCAGCCCTGTTAACACACCAGCCTGAGCAAAGTAAGAGCATGTGAAAAACACACGTGAGGATGTGCTTGTCTATTTGTGCTTTAGCATGTGTATGTTGTGCTTGTCAGACTAACATCTAGGATTCTTGAAAGCGATAGTTCATGCAAAAATAAAATTATTGTACAGACCCTCATGTTATTCCAAATCCACATGATTGGCTTGCCTGTGTAGAACACAGAAGAGATACTTTTATTATTTTAAATATATCCTTTCAGATTAGGAATAACATTACAATTTTTATTTTGGTGTGAACTATCATTTTAACGCTAACTCATTCTATGGCACACTTTGAATACTAATACATACTTTTTGTCACATTATCTAACATTATCATTATCTAACCCCCCCACCCCAAACCCCCCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18914
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000049676 Essential Splice Site 635 800 9 12
ENSDART00000049676 Essential Splice Site 635 800 9 12
Genomic Location (Zv9):
Chromosome 8 (position 17235304)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 16680192
GRCz11 8 16715904
KASP Assay ID:
2260-0353.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAACGTGGACATGCCACGGTTACACGACGTCATCGGAACACGCACTCTGG[T/C]CAGGAGGAGTTCAATGGATGCAGCTGATTTGTTATATTTATAACCATAAT
Long Flanking Sequence:
GTCATCCTATATAAAATCATCATATATATATATATATATATGTATGTATATATGTATGTATGTATGTATGTGTGTGTGTGTGTGTTTTATATATATATATATATATATATATATATATATATGTATATGTGTATAATATAGATATATAGATAGAGATGTGTGTGTGTATATATATGCGTGTATATATATGTGTGTGTGGATTCATATGTGTGTATATGTATTGATAATTCATATTGTTCATGTGTTGTTTGTAGTCTCTTGTATTTCTAGTTGTAGTATTTTCGCAGTTTTGTGCTGTGGTTTATTTCGCCCACATGATGTTCCAGGTTTATTACAGCCGTCACTGGAGCAGGTGGCCGTCGAGGCTCTTCAGCTCTGCACGTTACTCTTGCCTCCCGTCAGCCGCCGCAAACTCCAGCTGCTCTTGCGGATGATCTCACGCATGAGCCAGAACGTGGACATGCCACGGTTACACGACGTCATCGGAACACGCACTCTGG[T/C]CAGGAGGAGTTCAATGGATGCAGCTGATTTGTTATATTTATAACCATAATCTCACTCGCATTAAAGCAAATGCTGACTTGTTGAATGTCCTGTTGTGCACATTCACGCATGTCGTACACATTACAACTACATTTGTGTTTCTGTGTGCAGTTGGTGCAGACGTTCTCCAGGTGTGTGTTGAGCTGTGAGGAGGTGGACGATCTGGATGAGCTCTTGGCTACGAGGCTGTTGTCTTTTCTCATGGATCACCATCAGGAAGTCCTGCAGGTGCCTGTCTATCTGCGCAATGCTGTGGAAGATCACATCAACTATCTCAAGTCACTGGTGAGTCTACAAGGACCACACAGAAAGGAAAGGATTTACTTACAATTATGAATTTATACAGCTCTAAATAACTCAAAAGTGTTTAAAACTTAAACAATACAGTTTTGAAAGCTTCTCTTCTCATCAAGAATGCATGTATAACTTTATGGACGTTTTTGTCTATATTTATGGTCCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16447
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000049676 Essential Splice Site 635 800 9 12
ENSDART00000049676 Essential Splice Site 635 800 9 12
Genomic Location (Zv9):
Chromosome 8 (position 17235304)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 16680192
GRCz11 8 16715904
KASP Assay ID:
2260-0353.1 (used for ordering genotyping assays)
KASP Sequence:
GAACGTGGACATGCCACGGTTACAYGACGTCATCGGAACACGCACTCTGG[T/C]CAGGAGKAGTTCAATRGATGCAGCTGATTTGTTATATTTAWAACCATAAT
Long Flanking Sequence:
GTCATCCTATATAAAATCATCATATATATATATATATATATGTATGTATATATGTATGTATGTATGTATGTGTGTGTGTGTGTGTTTTATATATATATATATATATATATATATATATATATGTATATGTGTATAATATAGATATATAGATAGAGATGTGTGTGTGTATATATATGCGTGTATATATATGTGTGTGTGGATTCATATGTGTGTATATGTATTGATAATTCATATTGTTCATGTGTTGTTTGTAGTCTCTTGTATTTCTAGTTGTAGTATTTTCGCAGTTTTGTGCTGTGGTTTATTTCGCCCACATGATGTTCCAGGTTTATTACAGCCGTCACTGGAGCAGGTGGCCGTCGAGGCTCTTCAGCTCTGCACGTTACTCTTGCCTCCCGTCAGCCGCCGCAAACTCCAGCTGCTCTTGCGGATGATCTCACGCATGAGCCAGAACGTGGACATGCCACGGTTACACGACGTCATCGGAACACGCACTCTGG[T/C]CAGGAGGAGTTCAATGGATGCAGCTGATTTGTTATATTTATAACCATAATCTCACTCGCATTAAAGCAAATGCTGACTTGTTGAATGTCCTGTTGTGCACATTCACGCATGTCGTACACATTACAACTACATTTGTGTTTCTGTGTGCAGTTGGTGCAGACGTTCTCCAGGTGTGTGTTGAGCTGTGAGGAGGTGGACGATCTGGATGAGCTCTTGGCTACGAGGCTGTTGTCTTTTCTCATGGATCACCATCAGGAAGTCCTGCAGGTGCCTGTCTATCTGCGCAATGCTGTGGAAGATCACATCAACTATCTCAAGTCACTGGTGAGTCTACAAGGACCACACAGAAAGGAAAGGATTTACTTACAATTATGAATTTATACAGCTCTAAATAACTCAAAAGTGTTTAAAACTTAAACAATACAGTTTTGAAAGCTTCTCTTCTCATCAAGAATGCATGTATAACTTTATGGACGTTTTTGTCTATATTTATGGTCCAT
Associated Phenotype:
Not determined