Busch Lab

ZMP

si:ch211-254e15.1

Ensembl ID:
ENSDARG00000018162
ZFIN ID:
ZDB-GENE-060503-507
Description:
hypothetical protein LOC100034581 [Source:RefSeq peptide;Acc:NP_001137526]
Human Orthologue:
CTNNAL1
Human Description:
catenin (cadherin-associated protein), alpha-like 1 [Source:HGNC Symbol;Acc:2512]
Mouse Orthologue:
Ctnnal1
Mouse Description:
catenin (cadherin associated protein), alpha-like 1 Gene [Source:MGI Symbol;Acc:MGI:1859649]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa43314 Nonsense Mutation detected in F1 DNA Not yet available
sa36875 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa36874 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa43314
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000016057 Nonsense 498 754 11 19
Genomic Location (Zv9):
Chromosome 19 (position 36314296)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 35178816
GRCz11 19 34765936
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCAAAGAGAACCTGGATGTATTTTGTGAGGCCTGGGAGTCCCAGCTCTG[C/A]GACATGGCGATCCTATTGAAGGAGATTAATGATGTGTTTGAGGGCCGCAG
Long Flanking Sequence:
ATTAGTTGAATGAGTTTTGAGTAGCCATAACTCCTGTCATCAGTTTTACATGATGCTTCAGAAATTTTTCTAATATGATAATGAAAATTTCTTAATTTATGCAATGTTGTAAACAGTTATGCTTTTTTATGGAAACATTTATACATTTTTATAATATATTGATGAATAGAAGTTACAATATGGCATTAATATGCCTTTTGAAGCTTTTTTTTTATTGTTCTTGTTTTAGTCCTTGGAACATGTTCATGACTGAGTTCATAAGAAAATGAAATTCGCTTTGGTCACACTTTATTTTGATAGTTTGTTCGTTTTGTTTAAGTTTGTTCCTTTTTATTTTCCGGGACTTTTCAAAAGCTTGTCTAATTAAATCAAATCATGAATTTCTCAAATTTCTCCTGTCAGATCATCTCAGCGGCACAGACTCTTGCTCTGCACCCCACCAGCAAGATAGCCAAAGAGAACCTGGATGTATTTTGTGAGGCCTGGGAGTCCCAGCTCTG[C/A]GACATGGCGATCCTATTGAAGGAGATTAATGATGTGTTTGAGGGCCGCAGAGGTACGTCAATCGGGTTTAGTCATCACATTAGATTTAAGGCCAAGTTTTATGATTACAAATCCCAACACCTCCCTTTTCCAAGCCAACATATGAACTCACTTTACATCATCAATGATATGCATTTAGAATAGAACAATATATACTTTTATAATCAAAATTATTATGTTAGTCAGCAAGACATCTTGGTGCCATCAGATTGAAAACATCAGTGAACTTTTATGAATTTATTGTGTCCGATTTTGTAGAAAATATTATACCATTTTTTCTTCATAATCTGTTATTAATCAACCTCAGTCTTGATAAAATTAATAAATGTTTTTTTTTTAAATACAGGATTTTGACTCTTTAATTGCCAAGTTAATAAGTCTTTTCAGAAATTAAGTCATTTTGTGTGTGTTTTTCACCAAATCAGTGACATCATTTATAAACTTGGCAGAGTTATTAATGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36875
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000016057 Essential Splice Site 528 754 12 19
ENSDART00000016057 Essential Splice Site 528 754 12 19
Genomic Location (Zv9):
Chromosome 19 (position 36311583)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 35176103
GRCz11 19 34763223
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTTTTTTAGGTGATAAGAAAACATATCTGTCTTTACCAAGGCCAGGGG[T/C]GAGTGTGATGAGGAACTATGATTTTATTACAAATTTGATTTACCATATTA
Long Flanking Sequence:
GGTAAATCTCTGTAGGCAAGGTTAGGGGGGGTGCATTTCGACAGTCCCACAGAGATTACAGGTCTGTGAAAAAAGCATTTGCTTATCTGTATTTGGGCTCAAGGATGTGTTTGAGTGATTTCGACTTCTCTGGGTGAAAGTGTGTTTTCTCACAGCGATGTATGAGGAGCTTTATGTGGCAGCGATATTTGTCAGTCTGAGGGAAAAGGCATCAGTAACATGACAGAAACCCGACGCCTGGGGAAATGTTTTTGTTCTAGATGAGAGGCTCTCGGTCATCAACCGTGCCAGTCCAGATCTTTCCCAGAAACCAAGTGTCATCCTCCAAGATCCTGCCTTTGTTTCTGTTCATCCTCATTATCATCTAAAGACATTTGTTTTAGGCTGGGCGAAGCAAGCTTGTAAATTGAAATGTTGTTAATATTAAGTAAAATGGTTGTCTCTCTCTTTTTTTTTTTTAGGTGATAAGAAAACATATCTGTCTTTACCAAGGCCAGGGG[T/C]GAGTGTGATGAGGAACTATGATTTTATTACAAATTTGATTTACCATATTAATTGTGTTGTTATTTTCTGATTGATCTTTTTCCTAGAAACACTCTGCTAACCTGAAGACAGTCAAGGCTGCCAAACTTGATGCTGAGGTACTCATGATAAAATGATGTGTGACAGTATATTTGAGTAATAATAATTAATACCTGTCATTTTTTAAATCATCATTGTTCTTGTTCTTAGTTGTTATTCCTTTTAAAAAAAATTATATACAGTATGTATTTGCAATATAATTGTCGTATTTGCCATTCCACAAAATCCAAAAACCAAATCACTTTCAAGATAATATCTAAAATAACCTGGACTTGACAAAACATAATCTGCAACAGAAGATTAAAGCCTCTTTTCCACTGCACACGACAATCGACAAGCGACAGACCGGAAGTCATTCATTTCCAATGGAGAGCAGTCTGGGAGCTGCGCTGAGTTTAGATCATCTCCGTATGCGGAAAATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36874
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000016057 Essential Splice Site 528 754 12 19
ENSDART00000016057 Essential Splice Site 528 754 12 19
Genomic Location (Zv9):
Chromosome 19 (position 36311583)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 35176103
GRCz11 19 34763223
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTTTTTTAGGTGATAAGAAAACATATCTGTCTTTACCAAGGCCAGGGG[T/C]GAGTGTGATGAGGAACTATGATTTTATTACAAATTTGATTTACCATATTA
Long Flanking Sequence:
GGTAAATCTCTGTAGGCAAGGTTAGGGGGGGTGCATTTCGACAGTCCCACAGAGATTACAGGTCTGTGAAAAAAGCATTTGCTTATCTGTATTTGGGCTCAAGGATGTGTTTGAGTGATTTCGACTTCTCTGGGTGAAAGTGTGTTTTCTCACAGCGATGTATGAGGAGCTTTATGTGGCAGCGATATTTGTCAGTCTGAGGGAAAAGGCATCAGTAACATGACAGAAACCCGACGCCTGGGGAAATGTTTTTGTTCTAGATGAGAGGCTCTCGGTCATCAACCGTGCCAGTCCAGATCTTTCCCAGAAACCAAGTGTCATCCTCCAAGATCCTGCCTTTGTTTCTGTTCATCCTCATTATCATCTAAAGACATTTGTTTTAGGCTGGGCGAAGCAAGCTTGTAAATTGAAATGTTGTTAATATTAAGTAAAATGGTTGTCTCTCTCTTTTTTTTTTTTAGGTGATAAGAAAACATATCTGTCTTTACCAAGGCCAGGGG[T/G]GAGTGTGATGAGGAACTATGATTTTATTACAAATTTGATTTACCATATTAATTGTGTTGTTATTTTCTGATTGATCTTTTTCCTAGAAACACTCTGCTAACCTGAAGACAGTCAAGGCTGCCAAACTTGATGCTGAGGTACTCATGATAAAATGATGTGTGACAGTATATTTGAGTAATAATAATTAATACCTGTCATTTTTTAAATCATCATTGTTCTTGTTCTTAGTTGTTATTCCTTTTAAAAAAAATTATATACAGTATGTATTTGCAATATAATTGTCGTATTTGCCATTCCACAAAATCCAAAAACCAAATCACTTTCAAGATAATATCTAAAATAACCTGGACTTGACAAAACATAATCTGCAACAGAAGATTAAAGCCTCTTTTCCACTGCACACGACAATCGACAAGCGACAGACCGGAAGTCATTCATTTCCAATGGAGAGCAGTCTGGGAGCTGCGCTGAGTTTAGATCATCTCCGTATGCGGAAAATT
Associated Phenotype:
Not determined