ZMP
GCNFA_DANRE
Ensembl ID:
Description:
Nuclear receptor subfamily 6 group A member 1-A [Source:UniProtKB/Swiss-Prot;Acc:Q9PU65]
Human Orthologue:
NR6A1
Human Description:
nuclear receptor subfamily 6, group A, member 1 [Source:HGNC Symbol;Acc:7985]
Mouse Orthologue:
Nr6a1
Mouse Description:
nuclear receptor subfamily 6, group A, member 1 Gene [Source:MGI Symbol;Acc:MGI:1352459]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa34517 | Splice Site, Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa34517
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006409 | Splice Site, Nonsense | 103 | 450 | 2 | 8 |
| ENSDART00000100982 | Splice Site, Nonsense | 98 | 445 | 3 | 9 |
| ENSDART00000130361 | Splice Site, Nonsense | 100 | 447 | 3 | 9 |
Genomic Location (Zv9):
Chromosome 8 (position 54786623)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 52918721 |
| GRCz11 | 8 | 52905014 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCGAGAAGATGGCATGCCGGGAGGAAGAAACAAAAGCATCGGCCCTGTA[C/T]AGGTATTACCCATAACCCCTCATTCAGCATCCCTGATCCTTGTCCATACA
Long Flanking Sequence:
TTATTATTATTATTGTTATTATTATTTAATAACTGACCTCTTTTCAATATAATGTTGCAATAAACTTCCCGAGGTTTAAAGACAAAACTAAGCTAATTTGTGGATAAATAATTATACTGCATGACCTCTGTGGGTACAAATTTACTTCACTGACTCAAAGCATCAATATTAGAGACTCATAATCCTCAATGCATACCAAATACAGTGTCTTTATAGCATCTTTACCCAAACCACCTTTCAAAACATCATTATTTTCACCCTGTCTCTCCAAACTTTGCCTTGTTTAAAAGTATTTTCCCTCACAACATCTAAATCACCCTACAGACCTCTTTGTGCACGATTTCCATAGGAATGCTGAAAAGAGGCGAAGCATTTCAGGATTTCGAAGGTAAAATTCTTTTCAAATTAACACTAAGTTTATTTTCCGATTGTGTTTTTTTTCTTCAGCTATCCGAGAAGATGGCATGCCGGGAGGAAGAAACAAAAGCATCGGCCCTGTA[C/T]AGGTATTACCCATAACCCCTCATTCAGCATCCCTGATCCTTGTCCATACATACTCTTTACTTCATTAAGACGCATATTAATTACTCCCATTACTGCCATTCAGCTCAAGTTTGGCCTCTCCATGCATCAATAGAGGAAATAGAGCTGATTAATTTGGGCGCCAATCAAAACAAGCGCAATACATCTTTATTTCAGCATAAATAGAGATGCAGATGAAGTGACCTCTGAAGATGTTAATTTCATTAGTCGTCAAGGCCAGAATTCTCTGCTCATTCATCATCCGCCGACCTCATAAAATCATTGTGTTCGACAAATTTTCTCTCAAAACCAGCAAATATGCACTCTTAATAATCAAACGTTGCCCTTTGATATGGTTTTTCAGACGTTTAGAATGTGATTATCTAGTGTACGGCTCTATATAGTGCAGTGTTGGTGTGTGGAAGCATTTGCCTTGCTGTAGCCTGATTTCTTGTGTGGATATAAAGGCAGAGCTTGTTTTT
Associated Phenotype:
Not determined