ZMP
rtdr1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate rhabdoid tumor deletion region gene 1 (RTDR1) [Source:UniProtKB/
Human Orthologue:
RTDR1
Human Description:
rhabdoid tumor deletion region gene 1 [Source:HGNC Symbol;Acc:13437]
Mouse Orthologue:
Rtdr1
Mouse Description:
rhabdoid tumor deletion region gene 1 Gene [Source:MGI Symbol;Acc:MGI:1918486]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa1690 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa1690
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000026831 | Nonsense | 304 | 340 | 7 | 7 |
| ENSDART00000113945 | None | None | 225 | None | 6 |
Genomic Location (Zv9):
Chromosome 8 (position 46973923)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 44573160 |
| GRCz11 | 8 | 44567066 |
KASP Assay ID:
554-1636.1 (used for ordering genotyping assays)
KASP Sequence:
GTGCTAAYGCCCTCCGTGCCCTTACAGTTCTGGCAGAAGTTCCCAGAGCC[C/T]GAGCACATCTGCGGCAGCATGTACCTCTGCTGAAGACCAGACTCACAGAT
Long Flanking Sequence:
ATCTCATCATGAGGTCATAATTCTTACTGACAATAAAATGAAACAAACATTCTTCCCAGAGCCACTATGTTTGTGGCTGTTCATAAATTCAGGTGGCTGTCATCATAATTTCTGATTGAATGCAGAAAGTAGGTTTTCGTGCTGTGCTGTGAGTGATTGGCCCTACAGTGGAAACATGTCTATTGGCCCTGCCCAGCTCAATAAAAACCCCGACTTGCACTGGCCTGACAGTGGAAAAGTGGCAATTCAAATATAAATATTTTTTCTTAAAAAAATAAAAATAAAAATTTACACTACTTTCCTGTTGACCCCTTAGCATCCCCTGTACTGTATATTCCAGGTAATGGCAAAATCTCATTGTCTGTCTGATTCTAGGTAAATCCGAGGCATTGGAAGCAGATGCCTTAGCCCCTCTGCTACAGCTAGTGTTGAGTGAGAATACAGCAGTGTGTGCTAACGCCCTCCGTGCCCTTACAGTTCTGGCAGAAGTTCCCAGAGCC[C/T]GAGCACATCTGCGGCAGCATGTACCTCTGCTGAAGACCAGACTCACAGATCCTAATTACCTCATTCAAGAAGCTGCCTCCACTACCATCGAAGTAATTTCCTGGCAGCCATGAGGAATAAAGAAGTTTGTGCACTAATATAAGCAAGGCCTGGTGTTTTATGTAAAATAAAAGTAAAGATTATCTACATCATTTAAGAACTTGTCATAAATGTAAAGTGAAATTAACGTAATAATAATAATAATGAAGAAATCTAAATGATTTGAAATTTATGTTTGATTAAAATAAGTCTGTTACAGATAAACTGCATTGCAGCTGTTACAAATTAGGTGCTTAAAATAAAGATAAACGTATTGGAAGGCAAACTATGTAATCAATTCTTTTGATGTGGTTTAATCTCTGTGCAGTGTCATGCTACTTGAAATCACTCTGTGTGGCAAATGGACTGGCCAGCAGTCAACGGGGTTCCAAGAATTTCTGTTTGCGAGATTTTCTGTCTGC
Associated Phenotype:
Data not available