Busch Lab

ZMP

copz1

Ensembl ID:
ENSDARG00000017844
ZFIN ID:
ZDB-GENE-000406-6
Description:
coatomer subunit zeta-1 [Source:RefSeq peptide;Acc:NP_571583]
Human Orthologue:
COPZ1
Human Description:
coatomer protein complex, subunit zeta 1 [Source:HGNC Symbol;Acc:2243]
Mouse Orthologue:
Copz1
Mouse Description:
coatomer protein complex, subunit zeta 1 Gene [Source:MGI Symbol;Acc:MGI:1929063]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa9246 Splice Site, Nonsense Mutation detected in F1 DNA Not yet available
sa13536 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa9246
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011201 Splice Site, Nonsense 183 198 8 9
Genomic Location (Zv9):
Chromosome 23 (position 36400071)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 36249724
GRCz11 23 36348527
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCATGTCGTTTCAGGGCGATGACGTGCCTCTGACAGAACAGACAGTCACT[C/T]AGGTGAGCYAAATCTCCAYGCATTTTCCYTCAGCAACACCTGTCGCCACC
Long Flanking Sequence:
CCAGATATTTGTTAAACAAATTTCCATGACTTTTCCAAAACATTTCGGGTTTATTTGTTTTTTCCAAATCTTTTCCAGGCCTGGAAAATGCCTTGTCAAAATTCCTTGACTTTGCCAGGACCGTATGAACCCTGCTGGTTAGTCATGCTGTTCTGCTATTATTTTGAACAATACTGTATGTTGTTTCTCTTTTTTTCAGAGTGATTCTGGAGAGCGACCCACAGCAGGTGGTTCACCGTGTCGCATTGAGGGTAACTACTTCCTATTCTCCTCCATTGCCTTTCATTACGTGGTGAATTGCGAATGCTAATCTGCTTAGTATCTGCTGCATCTCATGCTCTGTCGCCACTGATGCGCATTATGGTTCAGCGAGTCGGCTATTAAGTTTGATTTCCAATAATCTTGCGTGCACGAGACAGGAAGCACGCCAGCAGTCCTAAAGTGCTTTTGTCATGTCGTTTCAGGGCGATGACGTGCCTCTGACAGAACAGACAGTCACT[C/T]AGGTGAGCTAAATCTCCATGCATTTTCCTTCAGCAACACCTGTCGCCACCGCGGAGCAAATGTTTTATAGTGGCGGTGCGATTTTTACCCATGATTCATCTGCCAAATGTGTCTGCTGTGGTCCGATTCAGAAGGTTCCTCTGGGCTGCCGCTAGTCTGCCGCATGTAAACATGATGGCTAATTATTGGCGGCTGTCTGCTAGCGATGGCTCCCCGCGGCTGCTGTTAGTCGTGAGCGCGGCCTGATTAATGTTCTCGTTTAAGAGGCTGTGCGACAGGCTGCCTGCATGGCTTTCGTGTGCGTGATTAATGGCTGTCTCCTTGTCTTCAGCGCTATACGGTTACGCGGAGCCTCCTGCAAATTAAGATGATGAATTAATTCCTGGATGTTTTGCTGCGCCTGCATTACTCGATTACAGGGATTGTCTCACACATGTACACCTTTCCTGTAAAAGTTGAACATTACACTAGTGAAGTTTTCGATAGTTTGGTGTTGGTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13536
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011201 Nonsense 191 198 9 9
Genomic Location (Zv9):
Chromosome 23 (position 36405214)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 36254867
GRCz11 23 36353670
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AACTTTATATTGTTATTCTTTTATTTTAGGTGCTACAGTCAGCGAAGGAG[C/T]AGATCAAATGGTCTCTCCTGCGATAGGATTCTTCAGCTTTCTGTYCTGAA
Long Flanking Sequence:
AATGATAACTTTTGTTATTTAAAACAGTTCTCATTTTTTAGGGGAGGAAATACACTAAATTATTACAATATTTTAATGAAAAAATTGGGGAAAAAGTATCAGACAGTTTATAGAATTAAACAAATATAAAAGTAATATTAGACCCATACATAATAAATCCAGTACATCCAGAGGAATTTTCCAGCATTATTTTAATATAAGAAATATTAAAATGTCTATTACATTTGACAATTGTTTGTGTACTAATCAGTGTTTAATTTACCAATTGGTACATTTTTATATATATTTATATATTTAATAATATATTTATTTATATAATTTAATTCATATTTTATCTTCAAAATTAAATGCAATATTTAAAAAAATAAATTGTTACATTTAAATATATTTAATGTCTTTTCTCTATTTTAATACACAATATCATGTACATGACTGGTATATCTCAGCTCTAACTTTATATTGTTATTCTTTTATTTTAGGTGCTACAGTCAGCGAAGGAG[C/T]AGATCAAATGGTCTCTCCTGCGATAGGATTCTTCAGCTTTCTGTCCTGAACTGAAGCGAGGAAAAGCAATGAGAGAGCACCTCTTTTCATCACTACTGTCCCTTTCTGCCCTTTTCTCCGTGAGTGTTTTCATGACTGTTAAAGTGCACATCCACTGAAAACCACTTCTCCAGTTTCTCTCACTCCAGATAAGACCAGCAACAGCGCTATTTCTACACATTAACACAAGAGGAAGAAGCTTGCCGGGACTTTCTTTTTGGGAAAAGTACCGGGGCGTTTGTTTTTTTTTAAAGCCCATTCCAGTAAGCGCTTGAATATATGGCTGGTTTAGTGAATGATATCACTGTTGTACTGTGAGATTTTCATGAGGATTCATGTACATTCCAGTGGTCGATCTTTTCTCTGTTTTTGGATTGAAGTAAAGAGTTTCATCCCAGTTCTGCTGTGTTTTCCCTTTTTTTTGGGCTACTGTTGGGTTTGCAGAGGCGGCCGGTCGTGAC
Associated Phenotype:
Not determined