ZMP
traf2b
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate TNF receptor-associated factor 2 (TRAF2) [Source:UniProtKB/TrEMB
Human Orthologue:
TRAF2
Human Description:
TNF receptor-associated factor 2 [Source:HGNC Symbol;Acc:12032]
Mouse Orthologue:
Traf2
Mouse Description:
TNF receptor-associated factor 2 Gene [Source:MGI Symbol;Acc:MGI:101835]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa17008 | Nonsense | Available for shipment | Available now |
| sa33738 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa17008
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000074731 | Nonsense | 9 | 532 | 1 | 10 |
| ENSDART00000146296 | Nonsense | 9 | 532 | 2 | 11 |
Genomic Location (Zv9):
Chromosome 5 (position 63021300)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 53779876 |
| GRCz11 | 5 | 54426469 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGTTGTGGTCTACRTTTTTMYAGATGATCAGCGCTGCAGGCAYTCTGTG[T/A]AAATGGAAGGATATGGAACGWCCATCTTTACCATCTTCTCTGGACTCAAC
Long Flanking Sequence:
TGGTTTAGCTTTGAATTAATAATGTAACAAGGGTGTAATGCACTGGATGGCTGGCCAATCAAAGCATACAATGATTATTAGAACAATGAGTTTTGTAAAGCTTGGCATTTTTCTAAAAGGTCAAGCAGAGATAAGCTGCAATATGGAATGTAATTTTTTTTAACCTTAATTTTAAGACGTTGCACTACACCAAATAATATTTTTTAGTCACGTCATATAACCCTCTTAAAATTGGGCAGGAATGCTGAAAATGATCCATAATAAATGAATAATGCCATAATGCTAGTTGCTAGTATTGTAATGATTATGGGTATTGACATTAATAGTAGCAAATATGAAAAAGATATACTTACACAAGAACACACTGACATAACAGTGTCTATTTACTATGTTATTAAATTATATTAGGTCATATTTTCAGTAAAAATGAGAGAAATTCATGTTGAAATCAAGTTGTGGTCTACGTTTTTACAGATGATCAGCGCTGCAGGCACTCTGTG[T/A]AAATGGAAGGATATGGAACGTCCATCTTTACCATCTTCTCTGGACTCAACATTGCCTGGGATATCTCGAGAAGTGCTGTCGGTGTCCATGGAACCGAAATATCAATGCCAGCAGTGCAAAGATATTCTTAGGAAACCTTTCCAAGCACAATGTGGACATCGCTTCTGTGTGTTCTGTTTCAAACAACTGACCAGGTACCCAGAGCAACTCTCTGCCTCATGCTCTGCTTTATTTCTTTCCTCTCCATGGACATTCCCAATCCTTTTAATTTCTCGCTGGCTGTAGCTAAATTGTTGACCCACTCTTTGCCTCTTAATCTAAAGCCTGGTTTATACTTCTGCATCAAGTGACCGGCGTAACCAATGGCGCATGCAACGCGCGTAGCTGTGCATTTATACTTCTGCGCGCTGTCTCTGTTGGTCTGCATTAACACTTCCAAAACGCTAGTTGGCAGTGAGGTGTTAATGTTCCTCTGTGTCGAGTTTCTTCACCTGTGTTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33738
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000074731 | Essential Splice Site | 411 | 532 | 9 | 10 |
| ENSDART00000146296 | Essential Splice Site | 411 | 532 | 10 | 11 |
Genomic Location (Zv9):
Chromosome 5 (position 62995465)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 53805711 |
| GRCz11 | 5 | 54452304 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCAGTTAACTCATTTTTGATCCTGCCTGATGACTTTTCTTTGTTCTTCA[G/A]CATTTTACTCCAGTAAATATGGGTATAAGATGTGTCTGAGACTGTACCTG
Long Flanking Sequence:
TTTTGGTGAAATAAGCGTCATCTAGAGGTCTTCGCCTTTCATATAAGCCACTTCTGATACCAAATGATCAACTTGAAGTCCAGTTATTATTTGATGTTCCTAAAACTTGGATAAGGTGACCAGAATTTTGTCAGGTAGTTTACATATATCCTGTATTATCAGATGGCCATAAAGTGATTAATTTTTTCTAAATTGTTAAAATATTGGTCAAGTCCAGAGACACCTTGATTTTGAAAAAAAAAAAAAAAAAAAGTAATAAGTGGTCATAAATGACAATTTTTTCAATTCAAATGAGTAGCTACTTGGACAAGTGCATAGTACAGTGATTAACTTGGAAAAAAATTAATGATATTAATTCAAAAGTTTGCCATTCCCACCTTACATATGCCATTTTCAACTTTGTCAGTTGAGGAATTGTGAAATTTAATCAGGTAATTTTTAGTTTATTTGTGCAGTTAACTCATTTTTGATCCTGCCTGATGACTTTTCTTTGTTCTTCA[G/A]CATTTTACTCCAGTAAATATGGGTATAAGATGTGTCTGAGACTGTACCTGAACGGTGATGGCACAGGTCGAGGCTCTCATCTCTCTCTGTTCTTTGTGGTCATGAAAGGCAAATATGATGCTCTGCTGAAGTGGCCCTTCAGCCAGAAGGTAAATCTTCTTTTTACTATTTAATTTTCTCTTATAGCCTTTAAAGATGCCATAATATGAAAATCTGGCTATACCTTAGCATATCTGAATAACAGTTCACATAAATTGAGCTTTATACACTATAGCTTCCTTGTACTTATGTAAGTCCTGTGAATGTAAAACAGGCCAATTGGAACAAAACACAAATTCTGCCTATATACATCATTAATATGGACGCCCCGGCTATATGTTTGGCCACAATTCCTAGTGAGATTACAACAATTGTATATTTGTTTCTTATTTTTAAGTTGATCTAAGCTTCTGTTAAACAGATCATGTATGTGTTATTTTGAAATCGGGACAGTTTATGTA
Associated Phenotype:
Not determined