Busch Lab

ZMP

LOC100329245

Ensembl ID:
ENSDARG00000017649
Human Orthologue:
CDH7
Human Description:
cadherin 7, type 2 [Source:HGNC Symbol;Acc:1766]
Mouse Orthologue:
Cdh7
Mouse Description:
cadherin 7, type 2 Gene [Source:MGI Symbol;Acc:MGI:2442792]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa5068 Nonsense F2 line generated Not yet available
sa8860 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa5068
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055488 Nonsense 36 765 1 12
Genomic Location (Zv9):
Chromosome 24 (position 42792)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 40698
GRCz11 24 40698
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCTGCTGGCAGCTCCTCTGGAGAACATGAGCTCTRCTGACAGGCGGTCC[A/T]AACACCCTGAACACCCGGAGCCCTCACAGGCTGTCCTGCAGAGGCAGAAG
Long Flanking Sequence:
TGCCCTTTCAGGAGATTTCTAGAGTGTGAATGAGTGTGAGGAGGAGGAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGAAGAAGAAGAAGAGGAGGAGGAGGAGAACGAGGAGGAGGAGGAGGAGGCCGCACGACTGCTGCACTCAGATGATCTCAGTAATCATGATGAGGATGAAAGCGCTTGTCATTGGGAGACGTCGTCTACATCATGCTGCAGTTTGGGGGTTTCTGCTGTAATCCCGCTCTCTGTCCTGCAGACCCACTCTGAGATGTCTGAATAGATCTGGAATGACCCGTGTGTCAGAGCAGCTCATTCTCATCATCTCTGGCTCATTATTATTGGACTGTTTCTCACTTGAACACACACACGTCTGCTCAGAATCACAGCAGACCTTCAGCTGGTCCACATGGCCCAGTGTGTGCGTCTGTGTTTGCTGTGCTGGGCGCTCGGGCTGCTGGCAGCTCCTCTGGAGAACATGAGCTCTGCTGACAGGCGGTCC[A/T]AACACCCTGAACACCCGGAGCCCTCACAGGCTGTCCTGCAGAGGCAGAAGCGCAGCTGGGTCTGGAACCAGTTCTTCGTGCTGGAGGAACACACCGGCACAGACCCGCTGTACGTCGGCAAGGTAAGACCCCGCACCGCTGCTGTTTATCTGCTGTTCAGAGATGCTAAATCGAGAATCCGAGAGTTTCTCTCTGACTCCGCATGTGATGAAGGTGTAGAGCGTGAACATGAGACGATGACAGGACAGAAGCTGTCTAATCCTGCTGCTCTGCAGCTTCATCTCAGAATTTACTAGTTTGAGCAGAGCCGGCTTCCCCTCACACTGCCCTACATCTGCTGCAGGCTTATTAGCAGGAGACTCTGTGAAGCGCAGCTCTCTGCCTTTGACTGACTCTGGGTCAGTTTTGACTGACCGCTCTTCATGCAGAAACACCAGCGGCAGCTCAGAGAACAGCGTTCACAAGAGTCAAACACTGGAGGCAAGAAGAGGGGAAACAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa8860
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055488 Essential Splice Site 333 765 5 12
Genomic Location (Zv9):
Chromosome 24 (position 39786)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 37692
GRCz11 24 37692
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCATCAGCACTGATGAGGAGACACRAGAGGCAGTCATTATCCTCCAGCAG[G/A]TCAGACCACAGTGGCCAGCAGGAGAAATGATTCATTAGACTGATCAGAGA
Long Flanking Sequence:
CGTCTGTCGTCAGATTCTTTCCATCCTCTTCTTTGAGCGTGTTAAAGCACATGTATGCCATGTTTCAGGTCAGATTGAACTCGCTGTTCTGTATTTTGTATTGCGTTTAGCTTCTTATTCTACACTTGTTGTTATTTTATGCCGTTTTCCTTTTCTCTCCCCTTCAGTCATTGTTTGTGTTGTATTGTTGTTCACGGATGTAATGTTAGTTTGTGTTTGTTTATTTTCTGGGTTCTGATCCATTCTAAGAGCCTCTTGGGTGTTAACGCTAATAAATGAAGTAAACGAACCTGCATGTTCGGTCTCCTGTAGAGCGGTACGAGTTCTCGGTGCTGGAGTCAGCATCTGTGCTGTTAGCGGTGGCCAGACTGAAGGCTGCAGATGCTGACATCGGCTCCAATGCAGAGCTGGACTACAGTATAGTGGATGGAGACGCAGCCGGAGCTTTCAGCATCAGCACTGATGAGGAGACACGAGAGGCAGTCATTATCCTCCAGCAG[G/A]TCAGACCACAGTGGCCAGCAGGAGAAATGATTCATTAGACTGATCAGAGATGCCCGTATCCGCATATCAGAGAAGCAATAGCTGAGGTTTAGACTGGTGTTAGGAGAAATCTCTACTTTCCCAAACCCTAACAATCCCTAGCACATCAATAGTTAACCCTAACCCACCCTCTCCCTCTCCGTCTCTCTCTCCAGCCTTTGGACTATGAAACTAAAAGCACTTTTTCTCTGAAGATTGAAGCCACGAATCGAAACATTGACCCTCAGTTTGCGACCTTTGACCCCTTCAGTGATACGGCGACTGTGGAGATTATTGTAGAAGATGTAAATGAGCCGCCGGTGTTCTCCACACCCGTCAGTCACTTTCAGGTTTCGGAGGCGGTGAAGGTTGGCACTGTCATCGGTACGGTGTCAGCCCACGACCCAGACTCCTCCAGCTCTGCTATTAGGTAAACACTTTATTTATCTTCAGGTACACGATCAGACTGCTTCTGATTCATA
Associated Phenotype:
Not determined