Busch Lab

ZMP

pdcb

Ensembl ID:
ENSDARG00000017634
ZFIN ID:
ZDB-GENE-031023-2
Description:
phosducin 2 [Source:RefSeq peptide;Acc:NP_001020635]
Human Orthologue:
PDC
Human Description:
phosducin [Source:HGNC Symbol;Acc:8759]
Mouse Orthologue:
Pdc
Mouse Description:
phosducin Gene [Source:MGI Symbol;Acc:MGI:98090]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa11534 Nonsense Available for shipment Available now
sa6640 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa11534
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000008140 Nonsense 48 69 3 4
ENSDART00000062539 Nonsense 48 237 3 4
Genomic Location (Zv9):
Chromosome 20 (position 34112669)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 34185182
GRCz11 20 34088061
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGAGCATGGACCAGGAGGCTCTGCCACCCAATAAGAGGGAGCTGCTAAGA[C/T]AGATGTCGTCCCCACAGAAACCCAAAGACTCCTGCGTGGGTGGACTGAAT
Long Flanking Sequence:
TTATAAATAGAATACTTAGATTTTATTTAAACCATTTAAAGTTTGTCATTTCTGTTAATCATTTGAAGTTTACTTTTGCAAAACTCAGTTTACATACATTTAACTCGCTCTGTAAATTCTACTCCAATAATGTAGAGTTGAATTGATTTTTAAAATGTATGCTGAATAAACATAGAAGTAAGCAATGCTGTAGATTTTGTTACACTCCAAACTGACATTGCTTCTTGTTGTTTTATAAATCTTGGATTTTCTACTTAAACTGTTGCATTCTTACTAAAAACTATGAACTTTTTTATTTATAGTGATGAAAATAATTCATAGCTGAACTGATTATTGTTGTTTTTGTATTGAGAGAATCTAGTAATCAGGTTATTCATTCATTTTATTTTCTTCTCCAACATTCTCAAGGGCCCAAGGGTGTCATCAATGACTGGCGTAAGTTTAAACTGGAGAGCATGGACCAGGAGGCTCTGCCACCCAATAAGAGGGAGCTGCTAAGA[C/T]AGATGTCGTCCCCACAGAAACCCAAAGACTCCTGCGTGGGTGGACTGAATCGCAAGGTTGACTCACTTTTGAGCATCATTTCAAAATATAATTTATCCCTTACTTAAAAAGTACTATATTTTTCTGAATTTGTAAATTCAGAAAAAAAGGTTGTAAATAGCTAAATCGAGCACCGAATGTCCATCTGTATGATACTTAGGTCAAACAATAACTTTTTATTAACATTTTCTTAAAATTCCAAAATGGTCATGCTGTCAGCCATTTTGGCTCGTGTACTCTATATATAGCAAAGGGTCATTTACAGCAGTGGCTTGCCAGGGGACCACAAAGGGTTGCTAGGTTGTCCATGAGTTTTTTGATGTCAAGTTATTGTAGTAAGATATTAATGTATTATATTTCACCCATTTTACCCCAGTTTATTGTGAAACATGAAATAGTAATAAATCTGAAAAATTATTTTTGATATTGGTTAGTCAGAACCTGTAGATGACAAAATGTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6640
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000008140 None None 69 None 4
ENSDART00000062539 Nonsense 80 237 4 4
Genomic Location (Zv9):
Chromosome 20 (position 34110939)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 34183452
GRCz11 20 34086331
KASP Assay ID:
554-5335.1 (used for ordering genotyping assays)
KASP Sequence:
CTCCTTCTCAGATGAGCGCTCAGGAATATGAACTGATAAAGGAAGAAGAC[G/T]AGAAAAGCCTGCGCAAGTACCGTAAGCAGTGYATGCARGAGATGCAYGAG
Long Flanking Sequence:
CTTCTCCATGTGCACCAAACCCTTTCTTATAAGAAATATTTTCTTGGAAAATATTGTGCAATTCTAAATGTGCTCCACACAGGTGAGTGTGCTTAACAAACCACCTGCAAGACATGTTTCCCTTCCTTTAAAGATAACACATAAAAGTTATTAAGACTTGTAATATTCATGCACTGCTACTATCTGATGCTTTTACGTTCTTGTTTTTATCTCCACTTGCAAGTCGCGTTGGATAAAAGCATCTGCTGAATGAGTTCATGTCAACTGTAAATAAAGTGGTTTATTAAATTTATCAACAAATTTTCATTTTGGGGTGAGATTGTTCAAAATCTTTAGGTTCTGGGTGTAGTTTGTTTGTTTGTATTTTAAATAAACCACTACTGAATGCATCAAATACCAAAAAGCTTGACTTTAATCATTGATCTTCTTAACTAAAAGCTGTGAATTTCTCTCCTTCTCAGATGAGCGCTCAGGAATATGAACTGATAAAGGAAGAAGAC[G/T]AGAAAAGCCTGCGCAAGTACCGTAAGCAGTGCATGCAAGAGATGCACGAGCGCCTGAGCTTCGGGCCCAAATTCGAGGGCGTTTATGACCTTGACAGTGGCGAGGCCTTTCTGGAGGTCATTGAGAAGGAGCACCGGCTCACAGTGGTGGTGGTGCACATCTATAAAGATGGAGTGCCGGGCTGCGAGGCTCTTAACAGTTCATTGGATTGCTTGGCCACCGAATATGCCAGCGTTAAATTCTGCCGCATCTGCGCATGCGATACTGGAGCCGGCGATCGTTTCTGCGATGATGTGCTGCCTGCCTTGTTAGTGTACAAGGCTGGAGAGCTGCTGGGGAACTTCCTGGCTGTCACGCAGCATTTCAGCGAGGAGTTTTTTGCTACCGATGTCGAGGCCTTCCTCAATGCGTATGGACTGCTGCCAGAGAAGGAGTGTGGCCCTGGAGCTGAGGAGGATGAAGCTGATGTGGAGTGATGAAAGACAGCATGGTGAAAGAAT
Associated Phenotype:
Not determined