Busch Lab

ZMP

si:ch211-152c2.4

Ensembl ID:
ENSDARG00000017386
ZFIN ID:
ZDB-GENE-041210-8
Description:
Sine oculis-binding protein homolog [Source:UniProtKB/Swiss-Prot;Acc:A7XYJ6]
Human Orthologue:
SOBP
Human Description:
sine oculis binding protein homolog (Drosophila) [Source:HGNC Symbol;Acc:29256]
Mouse Orthologue:
Sobp
Mouse Description:
sine oculis-binding protein homolog (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:1924427]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa26185 Nonsense Mutation detected in F1 DNA Not yet available
sa30844 Nonsense Mutation detected in F1 DNA Not yet available
sa40195 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa26185
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000006961 Nonsense 124 668 3 6
ENSDART00000135618 Nonsense 124 668 3 7
Genomic Location (Zv9):
Chromosome 4 (position 600214)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 818130
GRCz11 4 831578
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGATCCTCCAACTGTTCCTGTGTCTCCCTCTGCATCTTCAGCCTCGCCA[C/T]GACACAACATGAACGTCATCGTGCCGCTCATCAAACCCTCCGCAGGTGTG
Long Flanking Sequence:
CACACACATGCAAACACAAATAGACAGACGCATACACAATCGCACAGACACACGCAAACAAACACAATCACACACACGCATGCAAACATACTCTCAGACAGACACATACACCATCACGCAAACACATAGACGTACACACACACAAACATACACAATCACACAGACACACACACATGGAAACATACAAAGACGTACACAATCACACACACAGACATTCAGTGTCACAAACATAATCACACATACACAACCACACACAAACACATGCAAACATATACACATACACAATCACACACACGCTGTTAGCATCACCCTCTTCCATGTGCTCTATTTCTGCTTCAGAGAACGCTGTGCCAAAGCCACTCAATGTGGAGAAGAAGATCCCTCCATCATCATCCTCGTCTTCATCATCATCATCCTCCTGTTCATCAGAGCCGGTCAGGAATGGAGATCAGGATCCTCCAACTGTTCCTGTGTCTCCCTCTGCATCTTCAGCCTCGCCA[C/T]GACACAACATGAACGTCATCGTGCCGCTCATCAAACCCTCCGCAGGTGTGTGTGTGAGACATAAGAGCAGTGGTGTGTGTGTTTCCTGCTGAGTGTGTGTTAAAATAAACTGAATTAAGGAGTGTGTGTGAATTAAAATAAGGTATATCTGTTAGTTTTTAGATCATTTACTTATAGGCACTATAATATACATGCTTTAAAGCGGTCTTTTACTGACAAATCAAAATTCTCTTCATCTTCTGAGATATCAGAGCTCATAGCGGTATACAATCCTGCTGTGAGTTTCAGAGCTCTACACTTTGTGGTTGCTCTTAAATCATCTCATGTTGAAGACAGTCCGACTAAACCACAGCTTCTGGAATCGTCTAGTCTATGATGTCATAAGGTGAATAAGCCCCGCCTCCATATGATGAAGAGCCATGACCACTTCTAAGGCACGACCTGTTTAGCTCTGTTAATATGCAAAACAGTCAGCCAATTACAGCAGTGGGCGTTTACTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30844
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000006961 Nonsense 566 668 6 6
ENSDART00000135618 Nonsense 566 668 6 7
ENSDART00000006961 Nonsense 566 668 6 6
ENSDART00000135618 Nonsense 566 668 6 7
Genomic Location (Zv9):
Chromosome 4 (position 592349)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 810265
GRCz11 4 823713
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGATCCCGTCGCCTCTGTCTGACTGTGAGGATGTGAAGGAGAATAGCTA[T/A]TTATGTGGGCGGGGCAATGACTCAGCCAATCAGTGGACGGCAGAGCAAAT
Long Flanking Sequence:
CCCCTCCACCCAACATTTCCACCACAAATGCCTCCGCCGTGGCCCCAGCCCATGATGATGATGCCTTACCCTGTGTTTGTACCCATTCCTATCCCAATCCCTATCCCCATCCCGATTTCCCCTCAGAACAGCCACCGAGGGGTCATCCGAAGCCTTCAGGAGCCGGAAAAAGAGCCCGCTGGGAGTCAGAGGGTAAAGACGGAGCGGTGTGTTTCTCCAGTGTCTGCATCCGAGCGGCAGGTCATTCAATGTCTGCGCAGAGACTCTGTGAAAGAGGAGAGAAATGACACACACATTCAGACTCTACGCAAAGCACTTTACACCTCTGTCCTCACATCCACAGCCTCAGCCTCATTGGACGGCAGAATCGTTAGTCCCGCCTCTTTGTACTCATTGGCTCGCTCCACTGCCATTCAGGCTGCCTCGTTTTCATTGGACAGCAGCTCCGGCCAGATCCCGTCGCCTCTGTCTGACTGTGAGGATGTGAAGGAGAATAGCTA[T/A]TTATGTGGGCGGGGCAATGACTCAGCCAATCAGTGGACGGCAGAGCAAATGGACTGTCAGAGTGACCAATCAAAAGAGGGCAAAGGGGAGGAGGAAACGCCTCAGGATGTGGAGCACACCTACGCACGGTCGGTGCCGCCAAAACTACGGGAGAAAAACACACACGTGAACACTCAAACACATTTACACACGCAAATCTGGGAGAAAAACACACAGGTGGATGAGCTGGGACCCGAGCAGAGCGTGCGGGACGATGCAGAGCCGGCTGTGAAGAGGCGATGCTTAAGGATCAGAGACCAGAACAAATGAGCGTGGGTGAGTCTCTTACACACTGTTCAATAAGTGTGTAACATTACATATAAGCAGGATAATGTACATCCAGCCGGTTGTTATTGCAGAATAAACCCTTCAGTCTAACGGTCGTCACACACCAAGCTGACAGTCGCCCATTGGGTTTCCTTGTGTTGCGTTTTGTTGGGTTAATGTCGGAGCTCATTGGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40195
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000006961 Nonsense 566 668 6 6
ENSDART00000135618 Nonsense 566 668 6 7
ENSDART00000006961 Nonsense 566 668 6 6
ENSDART00000135618 Nonsense 566 668 6 7
Genomic Location (Zv9):
Chromosome 4 (position 592349)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 810265
GRCz11 4 823713
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGATCCCGTCGCCTCTGTCTGACTGTGAGGATGTGAAGGAGAATAGCTA[T/A]TTATGTGGGCGGGGCAATGACTCAGCCAATCAGTGGACGGCAGAGCAAAT
Long Flanking Sequence:
CCCCTCCACCCAACATTTCCACCACAAATGCCTCCGCCGTGGCCCCAGCCCATGATGATGATGCCTTACCCTGTGTTTGTACCCATTCCTATCCCAATCCCTATCCCCATCCCGATTTCCCCTCAGAACAGCCACCGAGGGGTCATCCGAAGCCTTCAGGAGCCGGAAAAAGAGCCCGCTGGGAGTCAGAGGGTAAAGACGGAGCGGTGTGTTTCTCCAGTGTCTGCATCCGAGCGGCAGGTCATTCAATGTCTGCGCAGAGACTCTGTGAAAGAGGAGAGAAATGACACACACATTCAGACTCTACGCAAAGCACTTTACACCTCTGTCCTCACATCCACAGCCTCAGCCTCATTGGACGGCAGAATCGTTAGTCCCGCCTCTTTGTACTCATTGGCTCGCTCCACTGCCATTCAGGCTGCCTCGTTTTCATTGGACAGCAGCTCCGGCCAGATCCCGTCGCCTCTGTCTGACTGTGAGGATGTGAAGGAGAATAGCTA[T/A]TTATGTGGGCGGGGCAATGACTCAGCCAATCAGTGGACGGCAGAGCAAATGGACTGTCAGAGTGACCAATCAAAAGAGGGCAAAGGGGAGGAGGAAACGCCTCAGGATGTGGAGCACACCTACGCACGGTCGGTGCCGCCAAAACTACGGGAGAAAAACACACACGTGAACACTCAAACACATTTACACACGCAAATCTGGGAGAAAAACACACAGGTGGATGAGCTGGGACCCGAGCAGAGCGTGCGGGACGATGCAGAGCCGGCTGTGAAGAGGCGATGCTTAAGGATCAGAGACCAGAACAAATGAGCGTGGGTGAGTCTCTTACACACTGTTCAATAAGTGTGTAACATTACATATAAGCAGGATAATGTACATCCAGCCGGTTGTTATTGCAGAATAAACCCTTCAGTCTAACGGTCGTCACACACCAAGCTGACAGTCGCCCATTGGGTTTCCTTGTGTTGCGTTTTGTTGGGTTAATGTCGGAGCTCATTGGT
Associated Phenotype:
Not determined