ZMP

cdkl1

Ensembl ID:

ENSDARG00000017329

ZFIN ID:

ZDB-GENE-040808-34

Description:

Cyclin-dependent kinase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6AXJ9]

Human Orthologue:

CDKL1

Human Description:

cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:HGNC Symbol;Acc:1781]

Mouse Orthologue:

Cdkl1

Mouse Description:

cyclin-dependent kinase-like 1 (CDC2-related kinase) Gene [Source:MGI Symbol;Acc:MGI:1918341]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa38962	Nonsense	Mutation detected in F1 DNA	Not yet available
sa31949	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa38962

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000044357	Nonsense	227	350	7	10

Genomic Location (Zv9):

Chromosome 13 (position 37097595)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	36569897
GRCz11	13	36695729

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AATTATGGTTTAATGTTGTGCTCATAGGTGAGTTGATTCCTCGACATCAA[C/T]AGGTGTTCAGCACCAACCAGTTCTTTAGCGGCGTTTGTGTGCCTGAGCCA

Long Flanking Sequence:

CACACTCTCTAACTTTAATGTTGTATCTAACACCTCATTCTTTATTTCCAGCGGGTCCGTGTGATTATTACACAGATTATGTCGCGACACGGTGGTATCGAGCTCCAGAACTGTTAGTGGGAGACACACAGTACGGCCCGCCGGTAGACGTCTGGGCTGTAGGATGTGTTTTTGCGGAGCTACTCTCTGGCGCCCCCTTGTGGCCGGGCAAATCTGATGTAGACCAGCTGTATCTGATCAGGAAAACTCTGGGTAAGAGACACATTCATAAACCCCAGCTGTTCATATGCTGTAAGCATGCAACTTTCCTGCCTGCCTGATAAGCTAATATATAATATAATCTGAAATATTGTTATCGCTTTTTATTCTCTATTCTTCATCCATGTTAAGCTGCTTTGGCACAATCTACATTGTAAAAGCACTATAGAAATAAAGATGACTTGACTTAATAATTATGGTTTAATGTTGTGCTCATAGGTGAGTTGATTCCTCGACATCAA[C/T]AGGTGTTCAGCACCAACCAGTTCTTTAGCGGCGTTTGTGTGCCTGAGCCACAGGAGATGGTGAGATGACCAGCAAGTGTTCATCTTGAAAAAGATCATTTGAGGAGATCTAAAAAATTAACCCTCTCTTTTAAATGAATAGGAGCCTCTTGAACTGAAGTATCCCAACTTGTCGTACCAGGCACTGAGCCTCATGAAGGTCAGTTAAACACACAGTAAGCGCACAATGTTCATACACTGCACATTCAGAGTCAGTGTCAGCACATCTGCGTGTGTTTTAGGGTTGTCTGCGGATGGATCCGGCTGAGAGGTTGTCCTGTGAGCAGTTACTGGAACAGCCCTACTTTGACAGTCTGCGAGAGGAGAGCGAGAGTGTGACGCGTGAACTGGACCGCAAGAAACGCACACGGCAGCCACGCAAACACCTGCCACCTGGGGTCTGTTGATATTAAACACTCATACCTTGCCTGTGTCACCCTCTGTTACCAATCATTCAAATAG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa31949

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000044357	Nonsense	284	350	9	10

Genomic Location (Zv9):

Chromosome 13 (position 37097260)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	36569562
GRCz11	13	36695394

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GTCTGCGGATGGATCCGGCTGAGAGGTTGTCCTGTGAGCAGTTACTGGAA[C/T]AGCCCTACTTTGACAGTCTGCGAGAGGAGAGCGAGAGTGTGACGCGTGAA

Long Flanking Sequence:

TATAATCTGAAATATTGTTATCGCTTTTTATTCTCTATTCTTCATCCATGTTAAGCTGCTTTGGCACAATCTACATTGTAAAAGCACTATAGAAATAAAGATGACTTGACTTAATAATTATGGTTTAATGTTGTGCTCATAGGTGAGTTGATTCCTCGACATCAACAGGTGTTCAGCACCAACCAGTTCTTTAGCGGCGTTTGTGTGCCTGAGCCACAGGAGATGGTGAGATGACCAGCAAGTGTTCATCTTGAAAAAGATCATTTGAGGAGATCTAAAAAATTAACCCTCTCTTTTAAATGAATAGGAGCCTCTTGAACTGAAGTATCCCAACTTGTCGTACCAGGCACTGAGCCTCATGAAGGTCAGTTAAACACACAGTAAGCGCACAATGTTCATACACTGCACATTCAGAGTCAGTGTCAGCACATCTGCGTGTGTTTTAGGGTTGTCTGCGGATGGATCCGGCTGAGAGGTTGTCCTGTGAGCAGTTACTGGAA[C/T]AGCCCTACTTTGACAGTCTGCGAGAGGAGAGCGAGAGTGTGACGCGTGAACTGGACCGCAAGAAACGCACACGGCAGCCACGCAAACACCTGCCACCTGGGGTCTGTTGATATTAAACACTCATACCTTGCCTGTGTCACCCTCTGTTACCAATCATTCAAATAGTTTAAAGATGCAGTATGTAAGTTTGACGCCCAGTGGTTGAATTAGGTATTGCATGCCTGGTTCAAAACAAACGCAAGCACAAGTGTGCCTGACTATCAAGCCTAAAGGCTGATTTAAATAAAAGCAATACACGGATAGAAGAAATATTTTCCATATTAAAGTAGTTTTCACGTGCTTTATTCAGTGTTAAATGCTAACAATGTGAGTTTGAATTCCATTTTACATGACATTTATTGCCATGTAATGAAAGCAGCAGTTTCCCAGGGATGGGTTGCAGCTGGAAGGGCATCCCCTGCATAAAACATATGCTGGATAAGTTGGCGGTTCATTCCGCT

Associated Phenotype:

Not determined