Busch Lab

ZMP

opn1sw2

Ensembl ID:
ENSDARG00000017274
ZFIN ID:
ZDB-GENE-990604-40
Description:
Opsin-1, short-wave-sensitive 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9W6A8]
Human Orthologue:
RHO
Human Description:
rhodopsin [Source:HGNC Symbol;Acc:10012]
Mouse Orthologue:
Rho
Mouse Description:
rhodopsin Gene [Source:MGI Symbol;Acc:MGI:97914]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa38844 Nonsense Mutation detected in F1 DNA Not yet available
sa41842 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa38844
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011178 Nonsense 20 354 1 5
Genomic Location (Zv9):
Chromosome 11 (position 26406507)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 25235332
GRCz11 11 25472948
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAACAGCAAACGCCAGAACTGTTCGAAGACTTCCACATGCCCATCACTT[T/A]AGACGTCAGCAACATCTCAGCTTACAGCCCTTTCCTGGTCCCACAGGACC
Long Flanking Sequence:
TTAGCTGCTTTATCTGCATTGGCCGGCAGATTAAATGCCATCGCTAACACAGAACCACACTGAAGGGTGAAAGGGATCATCCGAATTAGTCAGGTTTTGGTGTTGGAAATGAGATTAGGTGAATTGTGTCTTGTACTGCGCAGATGTAGTTTTGTAGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCAGGAAACTTTGTGTGTAGCTGATGACAACAAACCTCAAATCCTACACTTAAGACCATTTGGGAGGAGCAAAATGATATCTTTTGGATCTCTATATAAGAGGGATTGCATGCCAATAATTTGAGGGAGTCTTCATCTGGTGACCAGTGAAGAGAGATTTGACATCAATCAAGGAATGCTGCAGTAATCTGCAGAAGAAATCAAACCATTTATTACAGCATTTCTCAGTGGAGTGGGCACCAATTACAAGCAAGATGAAGCAACAACAGCAAACGCCAGAACTGTTCGAAGACTTCCACATGCCCATCACTT[T/A]AGACGTCAGCAACATCTCAGCTTACAGCCCTTTCCTGGTCCCACAGGACCACCTGGGACACAGTGGCGTATTCATGGGCATGTCCGCTTTTATGCTCTTCCTTTTTATCGCAGGAACTGCCATCAACGTTCTTACCATAGTTTGCACAATTCAATACAAGAAACTCAGATCTCACCTGAACTATATTCTTGTGAACCTTGCCATTTCCAACTTGTGGGTGTCCGTTTTCGGTTCCTCGGTAGCGTTCTACGCCTTTTACAAAAAGTACTTTGTCTTTGGGCCGATAGGATGCAAAATCGAGGGCTTCACTTCAACAATTGGAGGTACATTGTAACATGCGTCCACATTGTTTTAATGCTAGCCACATGTAGATCTTACATTCTGCTACTGGACTGTGATGGTTTCAACAATCTTCTTTCTGTGTTTTTGCAGGAATGGTGAGTTTGTGGTCTCTTGCTGTGGTGGCGCTGGAAAGGTGGCTGGTCATTTGCAAACCCCTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41842
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011178 Nonsense 199 354 3 5
Genomic Location (Zv9):
Chromosome 11 (position 26407452)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 25236277
GRCz11 11 25473893
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACAGGTATATACCTGAGGGCTTGCAGTGCTCTTGTGGACCTGACTGGTA[T/A]ACGACTAACAACAAATTCAACAATGAATCCTACGTCATGTTCCTCTTCTG
Long Flanking Sequence:
TGTGGTCTCTTGCTGTGGTGGCGCTGGAAAGGTGGCTGGTCATTTGCAAACCCCTCGGGAACTTTACCTTCAAGACCCCTCATGCCATTGCCGGCTGCATACTTCCTTGGTGTATGGCATTGGCTGCTGGACTCCCTCCACTCTTAGGCTGGAGCCGGTAAGTCCCTTGGTTACATTTTACTTTGATGGTCCCTTCAGGCCTTCTGTTGACTTTGCAACTAGTATTACACAGCAAGTGTCCATGTGACCGTGTTCCTCATAGTCACTAAAATGTCTGTTGGCAGACGATCAGAATCAATTGTTTGCAGATTTAAAGCAGACACTAATGGTTGTTATATTCAACAGAATGTCTAAAGTGGAACTTCAACTTAATGTGTTGCCACTGCCTGTAATACACTGACAATGCAACAGCTTTTTGTTTTGCTAAATGGTGATGACTGAAATCTGTTTTACAGGTATATACCTGAGGGCTTGCAGTGCTCTTGTGGACCTGACTGGTA[T/A]ACGACTAACAACAAATTCAACAATGAATCCTACGTCATGTTCCTCTTCTGCTTTTGCTTTGCGGTTCCTTTCAGCACCATTGTATTCTGTTATGGTCAGCTGCTCATCACTCTCAAATTAGTAAGTACAATTTTCACTTCGAAATTTTTATTTTCCAAACTGCAATTATTCTTAAACAACCTTAATATATGGAACTATACATTTTACACATTACAATAAGGTCGTATCAGTTAATGTGAGTCAATGTATTCTCTAACATGAACAAACAACAAGCAATACATTTATTAGCCTACAGTATTTATTCATCTTTGTTAATGTTAAATGATAGTACAAAAAAGGTGTTTGTTGCTAGTTTAGGTTAACTCATTAAATTAACTAATGTTAAACATTCATTTGAATTTTAATATTGTATTTGTAAATGCTAAACTATGATTAATAAATGCTGTACTAGCATTATTCCTACTCATTTCATGTTTAGTAAATGCACTAACATTAACTAA
Associated Phenotype:
Not determined